RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YDR029WQ12111 104 aa4.34□□□□□ -1.71
PDB1YBR221C ATP20Q12233 115 aa4.34□□□□□ -1.71
PDB1YBR221C YAL064WP39711 94 aa4.33□□□□□ -1.72
PDB1YBR221C FLX1P40464 311 aa4.33□□□□□ -1.72
PDB1YBR221C YDR274CP87283 123 aa4.33□□□□□ -1.72
PDB1YBR221C LIP1Q03579 150 aa4.33□□□□□ -1.72
PDB1YBR221C SHH3Q04487 196 aa4.33□□□□□ -1.72
PDB1YBR221C GPI11Q06636 219 aa4.33□□□□□ -1.72
PDB1YBR221C KSH1Q8TGJ3 72 aa4.33□□□□□ -1.72
PDB1YBR221C HPA3P39979 161 aa4.32□□□□□ -1.72
PDB1YBR221C RAF1Q06891 181 aa4.32□□□□□ -1.72
PDB1YBR221C FEX1Q08913 375 aa4.32□□□□□ -1.72
PDB1YBR221C FEX2Q08991 375 aa4.32□□□□□ -1.72
PDB1YBR221C DFM1Q12743 341 aaKnown RBP4.32□□□□□ -1.72
PDB1YBR221C YFR035CP43608 114 aa4.31□□□□□ -1.72
PDB1YBR221C YMR295CQ03559 197 aa4.31□□□□□ -1.72
PDB1YBR221C YMR082CQ04276 118 aa4.31□□□□□ -1.72
PDB1YBR221C COA6Q3E846 104 aa4.31□□□□□ -1.72
PDB1YBR221C SCS22Q6Q595 175 aa4.31□□□□□ -1.72
PDB1YBR221C ECM12O13529 151 aa4.3□□□□□ -1.72
PDB1YBR221C POR1P04840 283 aaKnown RBP4.3□□□□□ -1.72
PDB1YBR221C UBC4P15731 148 aa4.3□□□□□ -1.72
PDB1YBR221C MRPL11P36521 249 aaPredicted RBP4.3□□□□□ -1.72
PDB1YBR221C SCW4P53334 386 aaKnown RBP4.3□□□□□ -1.72
PDB1YBR221C IRC25Q07951 179 aa4.3□□□□□ -1.72
PDB1YBR221C CSI2Q08054 341 aa4.3□□□□□ -1.72
PDB1YBR221C RRT1P38192 103 aa4.29□□□□□ -1.72
PDB1YBR221C YHR125WP38831 101 aa4.29□□□□□ -1.72
PDB1YBR221C CTR2P38865 189 aa4.29□□□□□ -1.72
PDB1YBR221C SPO73P40031 143 aa4.29□□□□□ -1.72
PDB1YBR221C TDA2P40045 126 aa4.29□□□□□ -1.72
PDB1YBR221C ERG25P53045 309 aa4.29□□□□□ -1.72
PDB1YBR221C YLR281CQ05863 155 aa4.29□□□□□ -1.72
PDB1YBR221C ECM19Q06011 112 aa4.29□□□□□ -1.72
PDB1YBR221C YOL029CQ08187 201 aa4.29□□□□□ -1.72
PDB1YBR221C YHL042WP38729 150 aa4.28□□□□□ -1.72
PDB1YBR221C SNF11P38956 169 aa4.28□□□□□ -1.72
PDB1YBR221C MSL1P40567 111 aaPredicted RBP4.28□□□□□ -1.72
PDB1YBR221C YGR026WP53217 278 aa4.28□□□□□ -1.72
PDB1YBR221C CAX4P53223 239 aa4.28□□□□□ -1.72
PDB1YBR221C ATP19P81451 68 aa4.28□□□□□ -1.72
PDB1YBR221C GRX5Q02784 150 aa4.28□□□□□ -1.72
PDB1YBR221C RIM9Q04734 239 aa4.28□□□□□ -1.72
PDB1YBR221C YHR213W-AQ8TGT4 77 aa4.28□□□□□ -1.72
PDB1YBR221C IGD1P43598 195 aa4.27□□□□□ -1.73
PDB1YBR221C THG1P53215 237 aaKnown RBP4.27□□□□□ -1.73
PDB1YBR221C YOS1Q3E834 85 aa4.27□□□□□ -1.73
PDB1YBR221C YLR365WQ7LIF2 110 aa4.27□□□□□ -1.73
PDB1YBR221C FAS1P07149 2051 aaKnown RBP4.26□□□□□ -1.73
PDB1YBR221C RPS27AP35997 82 aaKnown RBP4.26□□□□□ -1.73
PDB1YBR221C LSM2P38203 95 aaKnown RBP4.26□□□□□ -1.73
PDB1YBR221C RPS27BP38711 82 aa4.26□□□□□ -1.73
PDB1YBR221C PTH1P38876 190 aaKnown RBP4.26□□□□□ -1.73
PDB1YBR221C EMC5P40540 141 aa4.26□□□□□ -1.73
PDB1YBR221C PIR5P46999 287 aa4.26□□□□□ -1.73
PDB1YBR221C DAN1P47178 298 aa4.26□□□□□ -1.73
PDB1YBR221C MIC10Q96VH5 97 aa4.26□□□□□ -1.73
PDB1YBR221C STT4P37297 1900 aa4.25□□□□□ -1.73
PDB1YBR221C YKL044WP36092 106 aa4.25□□□□□ -1.73
PDB1YBR221C YNL217WP40152 326 aa4.25□□□□□ -1.73
PDB1YBR221C KNH1P50112 268 aa4.25□□□□□ -1.73
PDB1YBR221C SRL1Q08673 210 aa4.25□□□□□ -1.73
PDB1YBR221C YOR385WQ08909 290 aa4.25□□□□□ -1.73
PDB1YBR221C YOL162WP0CF19 215 aa4.24□□□□□ -1.73
PDB1YBR221C INO4P13902 151 aa4.24□□□□□ -1.73
PDB1YBR221C RPB9P27999 122 aa4.24□□□□□ -1.73
PDB1YBR221C ECO1P43605 281 aa4.24□□□□□ -1.73
PDB1YBR221C SEN15Q04675 128 aa4.24□□□□□ -1.73
PDB1YBR221C CYR1P08678 2026 aaKnown RBP4.23□□□□□ -1.73
PDB1YBR221C STF2P16965 84 aa4.23□□□□□ -1.73
PDB1YBR221C QCR10P37299 77 aa4.23□□□□□ -1.73
PDB1YBR221C SWD3P38123 315 aa4.23□□□□□ -1.73
PDB1YBR221C CYB5P40312 120 aa4.23□□□□□ -1.73
PDB1YBR221C GPI19Q04082 140 aa4.23□□□□□ -1.73
PDB1YBR221C YHP1Q04116 353 aa4.23□□□□□ -1.73
PDB1YBR221C PBA1Q05778 276 aa4.23□□□□□ -1.73
PDB1YBR221C PIN3Q06449 215 aa4.23□□□□□ -1.73
PDB1YBR221C HRT1Q08273 121 aa4.23□□□□□ -1.73
PDB1YBR221C YOR381W-AQ3E804 55 aa4.23□□□□□ -1.73
PDB1YBR221C YOR032W-AQ8TGS1 66 aa4.23□□□□□ -1.73
PDB1YBR221C RRT13P40042 185 aa4.22□□□□□ -1.73
PDB1YBR221C MPC3P53311 146 aa4.22□□□□□ -1.73
PDB1YBR221C YAL067W-AQ8TGK6 75 aa4.22□□□□□ -1.73
PDB1YBR221C YCL021W-AQ96VH3 125 aa4.22□□□□□ -1.73
PDB1YBR221C ATG40Q99325 256 aa4.22□□□□□ -1.73
PDB1YBR221C HSP26P15992 214 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
PDB1YBR221C YBR013CP38215 129 aa4.21□□□□□ -1.74
PDB1YBR221C MIG3P39943 394 aa4.21□□□□□ -1.74
PDB1YBR221C CWP2P43497 92 aa4.21□□□□□ -1.74
PDB1YBR221C UPS3Q04006 179 aa4.21□□□□□ -1.74
PDB1YBR221C MIX14Q04341 121 aa4.21□□□□□ -1.74
PDB1YBR221C ELP6Q04868 273 aa4.21□□□□□ -1.74
PDB1YBR221C SOM1Q05676 74 aa4.21□□□□□ -1.74
PDB1YBR221C YER078W-AQ3E7A2 54 aa4.21□□□□□ -1.74
PDB1YBR221C YFR010W-AP0C5N0 62 aa4.2□□□□□ -1.74
PDB1YBR221C NRG2P38082 220 aa4.2□□□□□ -1.74
PDB1YBR221C YFL065CP43539 102 aa4.2□□□□□ -1.74
PDB1YBR221C YFL012WP43580 148 aa4.2□□□□□ -1.74
PDB1YBR221C HUR1P45820 110 aa4.2□□□□□ -1.74
PDB1YBR221C YPR203WQ08994 102 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms