RNA–Protein interactions for RNA: YBL066C

SEF1, Transcript of Putative transcription factor, yeast

Gene SEF1, Length 3,447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEF1	YBL066C	YJL197C-A	P0C5P0	93 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	SNF4	P12904	322 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	VMA7	P39111	118 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	YEA6	P39953	335 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	FIP1	P45976	327 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	LSM3	P57743	89 aa	Known RBP	0.86	□□□□□ -2.27
SEF1	YBL066C	APS2	Q00381	147 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	YMR315W	Q04869	349 aa	Known RBP	0.86	□□□□□ -2.27
SEF1	YBL066C	YLR118C	Q12354	227 aa		0.86	□□□□□ -2.27
SEF1	YBL066C	YGL041W-A	P0C5N3	154 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	UBI4	P0CG63	381 aa	Known RBP	0.85	□□□□□ -2.27
SEF1	YBL066C	GTT1	P40582	234 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	LSM8	P47093	109 aa	Known RBP	0.85	□□□□□ -2.27
SEF1	YBL066C	YAE1	P47118	141 aa	Predicted RBP	0.85	□□□□□ -2.27
SEF1	YBL066C	TMA23	Q03525	211 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	THI74	Q04083	370 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	YHR007C-A	Q07074	71 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	FYV7	Q12247	151 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	HUT1	Q12520	339 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	YML100W-A	Q8TGT0	57 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	YER039C-A	P0CD97	72 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	MGT1	P26188	188 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	JAC1	P53193	184 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	IRC23	Q08416	157 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	YPL225W	Q08971	146 aa	Known RBP	0.85	□□□□□ -2.27
SEF1	YBL066C	ECM31	P38122	312 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	YMR295C	Q03559	197 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	YHP1	Q04116	353 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	FIT1	Q04433	528 aa		0.85	□□□□□ -2.27
SEF1	YBL066C	RPL30	P14120	105 aa	Known RBP	0.84	□□□□□ -2.27
SEF1	YBL066C	RPA12	P32529	125 aa	Known RBP	0.84	□□□□□ -2.27
SEF1	YBL066C	NSG1	P38837	291 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	FLX1	P40464	311 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	YGL101W	P53144	215 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	MPC1	P53157	130 aa	Known RBP	0.84	□□□□□ -2.27
SEF1	YBL066C	VPS28	Q02767	242 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	DIG2	Q03373	323 aa	Known RBP	0.84	□□□□□ -2.27
SEF1	YBL066C	YMR082C	Q04276	118 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	MIX14	Q04341	121 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	NAT3	Q06504	195 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	RDI1	Q12434	202 aa		0.84	□□□□□ -2.27
SEF1	YBL066C	GLC8	P41818	229 aa		0.84	□□□□□ -2.28
SEF1	YBL066C	GNA1	P43577	159 aa	Predicted RBP	0.84	□□□□□ -2.28
SEF1	YBL066C	SPG1	P50088	95 aa		0.84	□□□□□ -2.28
SEF1	YBL066C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.84	□□□□□ -2.28
SEF1	YBL066C	COX5B	P00425	151 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	PHO85	P17157	305 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	SIP18	P50263	79 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	COF1	Q03048	143 aa	Known RBP	0.83	□□□□□ -2.28
SEF1	YBL066C	CNL1	Q06333	122 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	FMP49	A0A023PZB3	126 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	PRE1	P22141	198 aa	Known RBP	0.83	□□□□□ -2.28
SEF1	YBL066C	SWM2	P40342	146 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	KEI1	Q06346	221 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	YCL001W-B	Q96VH2	84 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	VAR1	P02381	398 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	AQY2	P0CD90	149 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	HYM1	P32464	399 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	PAM17	P36147	197 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	YHL018W	P38744	120 aa	Predicted RBP	0.83	□□□□□ -2.28
SEF1	YBL066C	YHR140W	P38842	239 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	DAD4	P69851	72 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	HPT1	Q04178	221 aa	Known RBP	0.83	□□□□□ -2.28
SEF1	YBL066C	SHH3	Q04487	196 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	DGK1	Q12382	290 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	YKL068W-A	Q3E826	78 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	YHR213W-A	Q8TGT4	77 aa		0.83	□□□□□ -2.28
SEF1	YBL066C	UBC8	P28263	218 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	MRP49	P32388	137 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YHL005C	P38752	130 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YFL019C	P43576	117 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	SFT1	P43682	97 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	ERV14	P53173	138 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	GAL83	Q04739	417 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	HSP150	P32478	413 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	RBL2	P48606	106 aa	Known RBP	0.82	□□□□□ -2.28
SEF1	YBL066C	GEP7	P53171	287 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YGR039W	P53225	103 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	RSM19	P53733	91 aa	Predicted RBP	0.82	□□□□□ -2.28
SEF1	YBL066C	NCE101	Q02820	53 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	EST3	Q03096	181 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YMR175W-A	Q3E766	64 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YOR304C-A	O14468	76 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	COX8	P04039	78 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	RAD6	P06104	172 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	ADK1	P07170	222 aa	Known RBP	0.82	□□□□□ -2.28
SEF1	YBL066C	AHC2	P25649	128 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	IPT1	P38954	527 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YNL200C	P40165	246 aa	Known RBP	0.82	□□□□□ -2.28
SEF1	YBL066C	NSE4	P43124	402 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YCL001W-A	P87012	153 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	CSN9	Q03981	162 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	FIT2	Q08906	153 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	YPR013C	Q12145	317 aa		0.82	□□□□□ -2.28
SEF1	YBL066C	UBC4	P15731	148 aa		0.81	□□□□□ -2.28
SEF1	YBL066C	YCR099C	P25657	155 aa		0.81	□□□□□ -2.28
SEF1	YBL066C	AHT1	P29589	182 aa		0.81	□□□□□ -2.28
SEF1	YBL066C	SHB17	P36136	271 aa	Known RBP	0.81	□□□□□ -2.28
SEF1	YBL066C	HTD2	P38790	280 aa	Known RBP	0.81	□□□□□ -2.28
SEF1	YBL066C	HYR1	P40581	163 aa	Known RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms