RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	SWC7	Q06707	132 aa		2.92	□□□□□ -1.94
GEM1	YAL048C	ATG10	Q07879	167 aa		2.92	□□□□□ -1.94
GEM1	YAL048C	YOL085C	Q99345	113 aa		2.92	□□□□□ -1.94
GEM1	YAL048C	PRP8	P33334	2413 aa	Known RBP	2.92	□□□□□ -1.94
GEM1	YAL048C	SMD3	P43321	101 aa	Known RBP	2.91	□□□□□ -1.94
GEM1	YAL048C	HAL1	Q01766	294 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	YMR295C	Q03559	197 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	RIM9	Q04734	239 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	TMC1	Q08422	150 aa	Predicted RBP	2.91	□□□□□ -1.94
GEM1	YAL048C	YOR381W-A	Q3E804	55 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	YGL010W	P25338	174 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	FIT1	Q04433	528 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	SHH3	Q04487	196 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	PIN3	Q06449	215 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	YDR029W	Q12111	104 aa		2.91	□□□□□ -1.94
GEM1	YAL048C	SRB6	P32570	121 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	CLB6	P32943	380 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	IPT1	P38954	527 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	SNF11	P38956	169 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	YNL217W	P40152	326 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	YFR035C	P43608	114 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	ERG25	P53045	309 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	DOC1	P53068	250 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.9	□□□□□ -1.95	not detected
GEM1	YAL048C	FIT3	Q08907	204 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	YOR385W	Q08909	290 aa		2.9	□□□□□ -1.95
GEM1	YAL048C	RAD10	P06838	210 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	HMRA1	P0CY11	126 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	SCM4	P32564	187 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	YKL044W	P36092	106 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	SPO73	P40031	143 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	TDA2	P40045	126 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	RPL13B	P40212	199 aa	Known RBP	2.89	□□□□□ -1.95
GEM1	YAL048C	MPC1	P53157	130 aa	Known RBP	2.89	□□□□□ -1.95
GEM1	YAL048C	BRR2	P32639	2163 aa	Known RBP	2.89	□□□□□ -1.95
GEM1	YAL048C	EMP24	P32803	203 aa	Known RBP	2.89	□□□□□ -1.95
GEM1	YAL048C	THG1	P53215	237 aa	Known RBP	2.89	□□□□□ -1.95
GEM1	YAL048C	YIL046W-A	Q3E7Z4	54 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	KSH1	Q8TGJ3	72 aa		2.89	□□□□□ -1.95
GEM1	YAL048C	UTP20	P35194	2493 aa	Known RBP	2.88	□□□□□ -1.95
GEM1	YAL048C	COX5B	P00425	151 aa		2.88	□□□□□ -1.95
GEM1	YAL048C	YHR032W-A	P0C5N6	59 aa		2.88	□□□□□ -1.95
GEM1	YAL048C	RPL43A	P0CX25	92 aa	Known RBP	2.88	□□□□□ -1.95
GEM1	YAL048C	RPL43B	P0CX26	92 aa		2.88	□□□□□ -1.95
GEM1	YAL048C	TIR3	P40552	269 aa		2.88	□□□□□ -1.95
GEM1	YAL048C	YGR026W	P53217	278 aa		2.88	□□□□□ -1.95
GEM1	YAL048C	MZM1	Q03429	123 aa	Predicted RBP	2.88	□□□□□ -1.95
GEM1	YAL048C	GPI11	Q06636	219 aa		2.88	□□□□□ -1.95
GEM1	YAL048C	UBC4	P15731	148 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	FZF1	P32805	299 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	MRPL27	P36526	146 aa	Predicted RBP	2.87	□□□□□ -1.95
GEM1	YAL048C	KNH1	P50112	268 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	SEN15	Q04675	128 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	INO4	P13902	151 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	MRPL44	P19956	98 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	MRPL11	P36521	249 aa	Predicted RBP	2.87	□□□□□ -1.95
GEM1	YAL048C	ECM34	P38728	170 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	HPA3	P39979	161 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	ATP19	P81451	68 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	YLR365W	Q7LIF2	110 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	MIC10	Q96VH5	97 aa		2.87	□□□□□ -1.95
GEM1	YAL048C	MID2	P36027	376 aa		2.86	□□□□□ -1.95
GEM1	YAL048C	PIR5	P46999	287 aa		2.86	□□□□□ -1.95
GEM1	YAL048C	YPL067C	Q02754	198 aa		2.86	□□□□□ -1.95
GEM1	YAL048C	COA4	Q05809	96 aa		2.86	□□□□□ -1.95
GEM1	YAL048C	RAF1	Q06891	181 aa		2.86	□□□□□ -1.95
GEM1	YAL048C	MIG1	P27705	504 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	FMT1	P32785	401 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	QCR10	P37299	77 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	MSL1	P40567	111 aa	Predicted RBP	2.85	□□□□□ -1.95
GEM1	YAL048C	ERV14	P53173	138 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	YMR082C	Q04276	118 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	SOM1	Q05676	74 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	IRC23	Q08416	157 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	YOR268C	Q08734	132 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	YOR015W	Q12169	119 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	COA6	Q3E846	104 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	IRA1	P18963	3092 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	EMC5	P40540	141 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	YDL241W	Q07738	123 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	HRT1	Q08273	121 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	MEC1	P38111	2368 aa		2.85	□□□□□ -1.95
GEM1	YAL048C	ECM12	O13529	151 aa		2.84	□□□□□ -1.95
GEM1	YAL048C	GPI19	Q04082	140 aa		2.84	□□□□□ -1.95
GEM1	YAL048C	YHP1	Q04116	353 aa		2.84	□□□□□ -1.95
GEM1	YAL048C	IRC19	Q07843	230 aa		2.83	□□□□□ -1.96
GEM1	YAL048C	YOS1	Q3E834	85 aa		2.83	□□□□□ -1.96
GEM1	YAL048C	ATG40	Q99325	256 aa		2.83	□□□□□ -1.96
GEM1	YAL048C	FYV5	P25585	152 aa		2.83	□□□□□ -1.96
GEM1	YAL048C	YHR180W	P38868	163 aa		2.83	□□□□□ -1.96
GEM1	YAL048C	YNR077C	P53758	84 aa		2.83	□□□□□ -1.96
GEM1	YAL048C	GRX5	Q02784	150 aa		2.82	□□□□□ -1.96
GEM1	YAL048C	UPS3	Q04006	179 aa		2.82	□□□□□ -1.96
GEM1	YAL048C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.81	□□□□□ -1.96	not detected
GEM1	YAL048C	MRPS16	Q02608	121 aa		2.81	□□□□□ -1.96
GEM1	YAL048C	ATG41	Q12048	136 aa		2.81	□□□□□ -1.96
GEM1	YAL048C	YKR032W	P36127	104 aa		2.81	□□□□□ -1.96
GEM1	YAL048C	LSM2	P38203	95 aa	Known RBP	2.81	□□□□□ -1.96
GEM1	YAL048C	ELP6	Q04868	273 aa		2.81	□□□□□ -1.96
GEM1	YAL048C	PEP8	P40335	379 aa		2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms