RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C ATP19P81451 68 aa10.25□□□□□ -0.77
SSA1YAL005C VPS71Q03433 280 aa10.25□□□□□ -0.77
SSA1YAL005C YCR075W-AQ3E830 75 aa10.25□□□□□ -0.77
SSA1YAL005C RPL31BP0C2H9 113 aaKnown RBP10.25□□□□□ -0.77
SSA1YAL005C MRPL20P22354 195 aaPredicted RBP10.25□□□□□ -0.77
SSA1YAL005C YPT10P38146 199 aa10.25□□□□□ -0.77
SSA1YAL005C PRE5P40302 234 aaKnown RBP10.25□□□□□ -0.77
SSA1YAL005C HHO1P53551 258 aa10.25□□□□□ -0.77
SSA1YAL005C MPC2P38857 129 aa10.24□□□□□ -0.77
SSA1YAL005C PAU15P40585 124 aa10.24□□□□□ -0.77
SSA1YAL005C DAD4P69851 72 aa10.24□□□□□ -0.77
SSA1YAL005C SMT3Q12306 101 aaKnown RBP10.24□□□□□ -0.77
SSA1YAL005C ERG27Q12452 347 aaKnown RBP10.24□□□□□ -0.77
SSA1YAL005C FZF1P32805 299 aa10.23□□□□□ -0.77
SSA1YAL005C SDH4P37298 181 aa10.23□□□□□ -0.77
SSA1YAL005C YNL146C-AQ3E7Z1 64 aa10.23□□□□□ -0.77
SSA1YAL005C HSP10P38910 106 aa10.23□□□□□ -0.77
SSA1YAL005C MIC26P50087 233 aa10.23□□□□□ -0.77
SSA1YAL005C MDM10P18409 493 aa10.22□□□□□ -0.77
SSA1YAL005C POF1P25576 258 aa10.22□□□□□ -0.77
SSA1YAL005C RPL31AP0C2H8 113 aaKnown RBP10.21□□□□□ -0.77
SSA1YAL005C ALG13P53178 202 aa10.21□□□□□ -0.77
SSA1YAL005C YBR182C-AQ8TGU6 64 aa10.21□□□□□ -0.77
SSA1YAL005C RPL28P02406 149 aaKnown RBP10.21□□□□□ -0.78
SSA1YAL005C YMR320WQ04897 101 aa10.21□□□□□ -0.78
SSA1YAL005C TIR1P10863 254 aa10.2□□□□□ -0.78
SSA1YAL005C YER135CP40082 130 aa10.2□□□□□ -0.78
SSA1YAL005C YGL010WP25338 174 aa10.19□□□□□ -0.78
SSA1YAL005C GRH1Q04410 372 aaKnown RBP10.19□□□□□ -0.78
SSA1YAL005C YOR105WQ08504 108 aa10.19□□□□□ -0.78
SSA1YAL005C DAD1Q12248 94 aa10.19□□□□□ -0.78
SSA1YAL005C QRI5P32344 111 aa10.19□□□□□ -0.78
SSA1YAL005C UBC11P52492 156 aa10.19□□□□□ -0.78
SSA1YAL005C YMR244WQ04018 355 aa10.19□□□□□ -0.78
SSA1YAL005C YBR013CP38215 129 aa10.18□□□□□ -0.78
SSA1YAL005C SPI1P40092 148 aa10.18□□□□□ -0.78
SSA1YAL005C YDR274CP87283 123 aa10.18□□□□□ -0.78
SSA1YAL005C ELC1Q03071 99 aa10.18□□□□□ -0.78
SSA1YAL005C CNL1Q06333 122 aa10.18□□□□□ -0.78
SSA1YAL005C YFR045WP43617 309 aa10.17□□□□□ -0.78
SSA1YAL005C YHR022CP38763 256 aa10.17□□□□□ -0.78
SSA1YAL005C YPL162CQ12042 273 aa10.17□□□□□ -0.78
SSA1YAL005C ARO2P28777 376 aaKnown RBP10.16□□□□□ -0.78
SSA1YAL005C HAC1P41546 238 aa10.16□□□□□ -0.78
SSA1YAL005C ARC18Q05933 178 aaKnown RBP10.16□□□□□ -0.78
SSA1YAL005C CCW12Q12127 133 aa10.16□□□□□ -0.78
SSA1YAL005C YOL085CQ99345 113 aa10.16□□□□□ -0.78
SSA1YAL005C DIF1O13577 133 aa10.15□□□□□ -0.78
SSA1YAL005C MIG3P39943 394 aa10.15□□□□□ -0.78
SSA1YAL005C VTS1Q08831 523 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
SSA1YAL005C YLR342W-AQ3E810 57 aa10.15□□□□□ -0.78
SSA1YAL005C YER039C-AP0CD97 72 aa10.15□□□□□ -0.79
SSA1YAL005C PAU5P43575 122 aa10.14□□□□□ -0.79
SSA1YAL005C MRPS8Q03799 155 aa10.14□□□□□ -0.79
SSA1YAL005C YNR034W-AQ3E841 98 aa10.14□□□□□ -0.79
SSA1YAL005C MIX23P38162 196 aa10.13□□□□□ -0.79
SSA1YAL005C PAM17P36147 197 aa10.13□□□□□ -0.79
SSA1YAL005C MRPL31P14063 131 aaPredicted RBP10.12□□□□□ -0.79
SSA1YAL005C CYC7P00045 113 aa10.11□□□□□ -0.79
SSA1YAL005C YDR366CP87287 132 aa10.11□□□□□ -0.79
SSA1YAL005C HMRA1P0CY11 126 aa10.09□□□□□ -0.79
SSA1YAL005C YFR035CP43608 114 aa10.09□□□□□ -0.79
SSA1YAL005C UTP23Q12339 254 aaKnown RBP10.09□□□□□ -0.79
SSA1YAL005C RPB11P38902 120 aa10.09□□□□□ -0.79
SSA1YAL005C GET2P40056 285 aa10.09□□□□□ -0.79
SSA1YAL005C YLR122CQ12312 125 aa10.09□□□□□ -0.79
SSA1YAL005C YDR215CQ12240 137 aa10.07□□□□□ -0.8
SSA1YAL005C YLR281CQ05863 155 aa10.07□□□□□ -0.8
SSA1YAL005C PAU19P0CE85 124 aa10.06□□□□□ -0.8
SSA1YAL005C PAU21P0CE86 164 aa10.06□□□□□ -0.8
SSA1YAL005C PAU22P0CE87 164 aa10.06□□□□□ -0.8
SSA1YAL005C PAU3P25610 124 aa10.06□□□□□ -0.8
SSA1YAL005C TIM22Q12328 207 aa10.06□□□□□ -0.8
SSA1YAL005C RPL11AP0C0W9 174 aaKnown RBP10.05□□□□□ -0.8
SSA1YAL005C RPL12AP0CX53 165 aaKnown RBP10.05□□□□□ -0.8
SSA1YAL005C RPL12BP0CX54 165 aa10.05□□□□□ -0.8
SSA1YAL005C UPS3Q04006 179 aa10.05□□□□□ -0.8
SSA1YAL005C RPL11BQ3E757 174 aaPredicted RBP10.05□□□□□ -0.8
SSA1YAL005C YHR130CP38834 111 aa10.05□□□□□ -0.8
SSA1YAL005C ISU2Q12056 156 aa10.05□□□□□ -0.8
SSA1YAL005C OST3P48439 350 aa10.04□□□□□ -0.8
SSA1YAL005C IRC22P40006 225 aa10.03□□□□□ -0.8
SSA1YAL005C AGA1P32323 725 aa10.03□□□□□ -0.8
SSA1YAL005C FUN14P18411 198 aa10.02□□□□□ -0.81
SSA1YAL005C SSS1P35179 80 aa10.02□□□□□ -0.81
SSA1YAL005C NRG2P38082 220 aa10.02□□□□□ -0.81
SSA1YAL005C MRPL28P36527 147 aa10.01□□□□□ -0.81
SSA1YAL005C THG1P53215 237 aaKnown RBP10.01□□□□□ -0.81
SSA1YAL005C COX12Q01519 83 aa10.01□□□□□ -0.81
SSA1YAL005C COF1Q03048 143 aaKnown RBP10.01□□□□□ -0.81
SSA1YAL005C POR1P04840 283 aaKnown RBP10.01□□□□□ -0.81
SSA1YAL005C ISD11Q6Q560 94 aa10.01□□□□□ -0.81
SSA1YAL005C SDS23P53172 527 aa10□□□□□ -0.81
SSA1YAL005C RPL2AP0CX45 254 aaKnown RBP9.99□□□□□ -0.81
SSA1YAL005C RPL2BP0CX46 254 aaKnown RBP9.99□□□□□ -0.81
SSA1YAL005C RPS11AP0CX47 156 aaKnown RBP9.99□□□□□ -0.81
SSA1YAL005C RPS11BP0CX48 156 aaKnown RBP9.99□□□□□ -0.81
SSA1YAL005C PAU7P39545 55 aa9.99□□□□□ -0.81
SSA1YAL005C AIM11P87275 137 aa9.99□□□□□ -0.81
SSA1YAL005C KEG1P43614 200 aa9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms