RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	YBR126W-A	Q8TGU7	68 aa		5.83	□□□□□ -1.48
TGA1	tA(UGC)A	POF1	P25576	258 aa		5.82	□□□□□ -1.48
TGA1	tA(UGC)A	YFR045W	P43617	309 aa		5.82	□□□□□ -1.48
TGA1	tA(UGC)A	ORM2	Q06144	216 aa		5.82	□□□□□ -1.48
TGA1	tA(UGC)A	TY1A-NL2	Q12470	440 aa		5.82	□□□□□ -1.48
TGA1	tA(UGC)A	YCR075W-A	Q3E830	75 aa		5.82	□□□□□ -1.48
TGA1	tA(UGC)A	PCC1	Q3E833	88 aa		5.82	□□□□□ -1.48
TGA1	tA(UGC)A	Q0255	P03881	472 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	RPL12A	P0CX53	165 aa	Known RBP	5.81	□□□□□ -1.48
TGA1	tA(UGC)A	RPL12B	P0CX54	165 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	YGL015C	P33199	130 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	POG1	P40473	351 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	HIT1	P46973	164 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	MOG1	P47123	218 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	BNS1	P50084	137 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	TIM21	P53220	239 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	ATP23	P53722	227 aa		5.81	□□□□□ -1.48
TGA1	tA(UGC)A	SEC59	P20048	519 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	LDS1	P31379	325 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	KRE9	P39005	276 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	KEG1	P43614	200 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	YDL183C	P48569	320 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	AIM34	Q03673	198 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	YOR105W	Q08504	108 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	TIM22	Q12328	207 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	YGR240C-A	Q3E786	66 aa		5.8	□□□□□ -1.48
TGA1	tA(UGC)A	YIL024C	P40543	189 aa		5.79	□□□□□ -1.48
TGA1	tA(UGC)A	YGR026W	P53217	278 aa		5.79	□□□□□ -1.48
TGA1	tA(UGC)A	UPS3	Q04006	179 aa		5.79	□□□□□ -1.48
TGA1	tA(UGC)A	TY1A-DR3	Q12441	440 aa		5.79	□□□□□ -1.48
TGA1	tA(UGC)A	SIT1	P39980	628 aa		5.78	□□□□□ -1.48
TGA1	tA(UGC)A	MRPL31	P14063	131 aa	Predicted RBP	5.77	□□□□□ -1.49
TGA1	tA(UGC)A	YCR023C	P25351	611 aa		5.77	□□□□□ -1.49
TGA1	tA(UGC)A	QRI5	P32344	111 aa		5.77	□□□□□ -1.49
TGA1	tA(UGC)A	YNL217W	P40152	326 aa		5.77	□□□□□ -1.49
TGA1	tA(UGC)A	YPR053C	Q6Q5F3	151 aa		5.77	□□□□□ -1.49
TGA1	tA(UGC)A	ATG33	Q06485	197 aa		5.76	□□□□□ -1.49
TGA1	tA(UGC)A	NAT3	Q06504	195 aa		5.76	□□□□□ -1.49
TGA1	tA(UGC)A	YLL066W-B	Q8TGJ7	56 aa		5.76	□□□□□ -1.49
TGA1	tA(UGC)A	SRB6	P32570	121 aa		5.75	□□□□□ -1.49
TGA1	tA(UGC)A	MRPL28	P36527	147 aa		5.75	□□□□□ -1.49
TGA1	tA(UGC)A	GIM5	Q04493	163 aa		5.75	□□□□□ -1.49
TGA1	tA(UGC)A	ARC18	Q05933	178 aa	Known RBP	5.75	□□□□□ -1.49
TGA1	tA(UGC)A	YLR042C	Q07990	161 aa		5.75	□□□□□ -1.49
TGA1	tA(UGC)A	SMT3	Q12306	101 aa	Known RBP	5.75	□□□□□ -1.49
TGA1	tA(UGC)A	YCL001W-B	Q96VH2	84 aa		5.75	□□□□□ -1.49
TGA1	tA(UGC)A	FMP49	A0A023PZB3	126 aa		5.74	□□□□□ -1.49
TGA1	tA(UGC)A	MIX23	P38162	196 aa		5.74	□□□□□ -1.49
TGA1	tA(UGC)A	IRC22	P40006	225 aa		5.74	□□□□□ -1.49
TGA1	tA(UGC)A	CRC1	Q12289	327 aa		5.74	□□□□□ -1.49
TGA1	tA(UGC)A	LAC1	P28496	418 aa		5.73	□□□□□ -1.49
TGA1	tA(UGC)A	MRPS9	P38120	278 aa		5.73	□□□□□ -1.49
TGA1	tA(UGC)A	DAD3	P69850	94 aa		5.73	□□□□□ -1.49
TGA1	tA(UGC)A	YLR118C	Q12354	227 aa		5.73	□□□□□ -1.49
TGA1	tA(UGC)A	DCN1	Q12395	269 aa		5.73	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-DR4	O74302	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-A	P0CX57	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-PR1	P0CX58	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-OR	P0CX59	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-PR2	P0CX60	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-DR5	P0CX65	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-ER2	P0CX66	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-GR3	P0CX67	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-LR1	P0CX68	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-MR2	P0CX69	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	NTF2	P33331	125 aa	Known RBP	5.72	□□□□□ -1.49
TGA1	tA(UGC)A	RPB11	P38902	120 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-JR2	P47099	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	DIA1	P54005	336 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-DR1	Q03856	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-ML1	Q04706	440 aa	Known RBP	5.72	□□□□□ -1.49
TGA1	tA(UGC)A	YPR195C	Q06594	109 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	TY1A-GR2	Q12485	440 aa		5.72	□□□□□ -1.49
TGA1	tA(UGC)A	GPI19	Q04082	140 aa		5.71	□□□□□ -1.5
TGA1	tA(UGC)A	DGA1	Q08650	418 aa		5.71	□□□□□ -1.5
TGA1	tA(UGC)A	HMRA1	P0CY11	126 aa		5.7	□□□□□ -1.5
TGA1	tA(UGC)A	GAT4	P40569	121 aa		5.7	□□□□□ -1.5
TGA1	tA(UGC)A	SPC1	P46965	94 aa		5.7	□□□□□ -1.5
TGA1	tA(UGC)A	CUP2	P15315	225 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	UBC5	P15732	148 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	YHR140W	P38842	239 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	SUR2	P38992	349 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	YNL200C	P40165	246 aa	Known RBP	5.69	□□□□□ -1.5
TGA1	tA(UGC)A	YGR017W	P53210	297 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	DPP1	Q05521	289 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	YOP1	Q12402	180 aa		5.69	□□□□□ -1.5
TGA1	tA(UGC)A	YPT53	P36019	220 aa		5.68	□□□□□ -1.5
TGA1	tA(UGC)A	HSP10	P38910	106 aa		5.68	□□□□□ -1.5
TGA1	tA(UGC)A	CDC40	P40968	455 aa	Predicted RBP	5.68	□□□□□ -1.5
TGA1	tA(UGC)A	MGA1	P53050	456 aa		5.68	□□□□□ -1.5
TGA1	tA(UGC)A	GIS2	P53849	153 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
TGA1	tA(UGC)A	RPL27A	P0C2H6	136 aa	Known RBP	5.67	□□□□□ -1.5
TGA1	tA(UGC)A	NHP6A	P11632	93 aa	Known RBP	5.67	□□□□□ -1.5
TGA1	tA(UGC)A	FRS1	P15624	595 aa	Known RBP	5.67	□□□□□ -1.5
TGA1	tA(UGC)A	ZRT1	P32804	376 aa		5.67	□□□□□ -1.5
TGA1	tA(UGC)A	KTI12	P34253	313 aa	Known RBP	5.67	□□□□□ -1.5
TGA1	tA(UGC)A	PAM17	P36147	197 aa		5.67	□□□□□ -1.5
TGA1	tA(UGC)A	PBA1	Q05778	276 aa		5.67	□□□□□ -1.5
TGA1	tA(UGC)A	DXO1	Q06349	442 aa		5.67	□□□□□ -1.5
TGA1	tA(UGC)A	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms