RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	SWR1	Q05471	1514 aa		0.78	□□□□□ -2.28
RLM1	YPL089C	QCR10	P37299	77 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	MHF1	Q3E835	90 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	MRPL44	P19956	98 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	SFT2	P38166	215 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	SED1	Q01589	338 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	YMR007W	Q03675	126 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	SDH7	Q04401	133 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	TY1B-DR4	Q07793	1604 aa		0.77	□□□□□ -2.29
RLM1	YPL089C	KOG1	P38873	1557 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	FUN14	P18411	198 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	HUA1	P40325	198 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	BRP1	P53194	125 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	YPL067C	Q02754	198 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	SLO1	Q3E784	85 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	Q0144	Q9ZZW2	109 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	RPL33A	P05744	107 aa	Known RBP	0.76	□□□□□ -2.29
RLM1	YPL089C	YGL014C-A	P0C5N1	53 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	NMT1	P14743	455 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	YGL149W	P53116	101 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	SEN15	Q04675	128 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	CCW12	Q12127	133 aa		0.76	□□□□□ -2.29
RLM1	YPL089C	RIF1	P29539	1916 aa		0.75	□□□□□ -2.29
RLM1	YPL089C	MRP49	P32388	137 aa		0.75	□□□□□ -2.29
RLM1	YPL089C	SRL3	P36167	246 aa		0.75	□□□□□ -2.29
RLM1	YPL089C	YAR064W	P39563	99 aa		0.75	□□□□□ -2.29
RLM1	YPL089C	GAT4	P40569	121 aa		0.75	□□□□□ -2.29
RLM1	YPL089C	MPC1	P53157	130 aa	Known RBP	0.75	□□□□□ -2.29
RLM1	YPL089C	LCL2	Q08045	131 aa		0.75	□□□□□ -2.29
RLM1	YPL089C	YHR213W	P0CI67	198 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	HSP10	P38910	106 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	VMA7	P39111	118 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	LST8	P41318	303 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	YMR122C	Q03879	124 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	PAU21	P0CE86	164 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	PAU22	P0CE87	164 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	RPL40A	P0CH08	128 aa	Known RBP	0.74	□□□□□ -2.29
RLM1	YPL089C	RPL40B	P0CH09	128 aa	Known RBP	0.74	□□□□□ -2.29
RLM1	YPL089C	YCR001W	P25347	104 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	MRPL11	P36521	249 aa	Predicted RBP	0.74	□□□□□ -2.29
RLM1	YPL089C	SAE3	P89114	91 aa		0.74	□□□□□ -2.29
RLM1	YPL089C	SLH1	P53327	1967 aa	Known RBP	0.73	□□□□□ -2.29
RLM1	YPL089C	RTC6	O14464	93 aa		0.73	□□□□□ -2.29
RLM1	YPL089C	HAP3	P13434	144 aa		0.73	□□□□□ -2.29
RLM1	YPL089C	ANB1	P19211	157 aa		0.73	□□□□□ -2.29
RLM1	YPL089C	RPL37A	P49166	88 aa	Known RBP	0.73	□□□□□ -2.29
RLM1	YPL089C	YNL122C	P53921	115 aa	Predicted RBP	0.73	□□□□□ -2.29
RLM1	YPL089C	WIP1	Q2V2P8	89 aa		0.73	□□□□□ -2.29
RLM1	YPL089C	YLR099W-A	Q3E798	87 aa		0.73	□□□□□ -2.29
RLM1	YPL089C	UTP11	P34247	250 aa	Predicted RBP	0.72	□□□□□ -2.29
RLM1	YPL089C	AIM18	P38884	321 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	YIL102C	P40488	101 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	AIM11	P87275	137 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	COA4	Q05809	96 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	YLR296W	Q05898	108 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	FRQ1	Q06389	190 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	PRM3	Q08931	133 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	HFA1	P32874	2273 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	PFY1	P07274	126 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.72	□□□□□ -2.29
RLM1	YPL089C	SEC59	P20048	519 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	ERV14	P53173	138 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	IRC21	Q04772	201 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	YLR118C	Q12354	227 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	GTT2	Q12390	233 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	YOR376W-A	Q3E805	51 aa		0.72	□□□□□ -2.29
RLM1	YPL089C	UGX2	P32772	223 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	YKL044W	P36092	106 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	AIM36	Q03798	255 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	HSL1	P34244	1518 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	ROM2	P51862	1356 aa	Known RBP	0.71	□□□□□ -2.3
RLM1	YPL089C	RPL36B	O14455	100 aa	Known RBP	0.71	□□□□□ -2.3
RLM1	YPL089C	RPL36A	P05745	100 aa	Predicted RBP	0.71	□□□□□ -2.3
RLM1	YPL089C	HAP2	P06774	265 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	AIM4	P38305	123 aa	Predicted RBP	0.71	□□□□□ -2.3
RLM1	YPL089C	RPB11	P38902	120 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	APS2	Q00381	147 aa		0.71	□□□□□ -2.3
RLM1	YPL089C	BNI1	P41832	1953 aa		0.7	□□□□□ -2.3
RLM1	YPL089C	SNF11	P38956	169 aa		0.7	□□□□□ -2.3
RLM1	YPL089C	MGR2	Q02889	113 aa		0.7	□□□□□ -2.3
RLM1	YPL089C	SPC24	Q04477	213 aa		0.7	□□□□□ -2.3
RLM1	YPL089C	KTI11	Q3E840	82 aa		0.7	□□□□□ -2.3
RLM1	YPL089C	TCB3	Q03640	1545 aa	Known RBP	0.69	□□□□□ -2.3
RLM1	YPL089C	PEP1	P32319	1579 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	THO2	P53552	1597 aa	Known RBP	0.69	□□□□□ -2.3
RLM1	YPL089C	IRC20	Q06554	1556 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	YSF3	P0C074	85 aa	Predicted RBP	0.69	□□□□□ -2.3
RLM1	YPL089C	RPS22A	P0C0W1	130 aa	Known RBP	0.69	□□□□□ -2.3
RLM1	YPL089C	GSP1	P32835	219 aa	Known RBP	0.69	□□□□□ -2.3
RLM1	YPL089C	YJL009W	P47078	108 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	GPI19	Q04082	140 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	LDB18	Q07887	179 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	YOR072W	Q08486	104 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.69	□□□□□ -2.3
RLM1	YPL089C	REV3	P14284	1504 aa		0.69	□□□□□ -2.3
RLM1	YPL089C	RPO41	P13433	1351 aa	Known RBP	0.68	□□□□□ -2.3
RLM1	YPL089C	SNT2	P53127	1403 aa		0.68	□□□□□ -2.3
RLM1	YPL089C	MDS3	P53094	1487 aa		0.68	□□□□□ -2.3
RLM1	YPL089C	HHY1	P39982	102 aa		0.68	□□□□□ -2.3
RLM1	YPL089C	YFR035C	P43608	114 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms