RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C ERG25P53045 309 aa2.81□□□□□ -1.96
VPS21YOR089C MIX17Q03667 156 aa2.81□□□□□ -1.96
VPS21YOR089C SYM1Q06563 197 aa2.81□□□□□ -1.96
VPS21YOR089C RTR2Q12378 196 aa2.81□□□□□ -1.96
VPS21YOR089C RDI1Q12434 202 aa2.81□□□□□ -1.96
VPS21YOR089C IRA1P18963 3092 aa2.8□□□□□ -1.96
VPS21YOR089C MRP17P28778 131 aa2.8□□□□□ -1.96
VPS21YOR089C PAN3P36102 679 aaPredicted RBP2.8□□□□□ -1.96
VPS21YOR089C FIG1P38224 298 aa2.8□□□□□ -1.96
VPS21YOR089C VMA7P39111 118 aa2.8□□□□□ -1.96
VPS21YOR089C HHT1P61830 136 aa2.8□□□□□ -1.96
VPS21YOR089C MIX14Q04341 121 aa2.8□□□□□ -1.96
VPS21YOR089C FSF1Q12029 327 aaKnown RBP2.8□□□□□ -1.96
VPS21YOR089C YML100W-AQ8TGT0 57 aa2.8□□□□□ -1.96
VPS21YOR089C SEN1Q00416 2231 aaKnown RBP2.8□□□□□ -1.96
VPS21YOR089C ACC1Q00955 2233 aaKnown RBP2.79□□□□□ -1.96
VPS21YOR089C RPS28BP0C0X0 67 aaKnown RBP2.79□□□□□ -1.96
VPS21YOR089C ATP14Q12349 124 aa2.79□□□□□ -1.96
VPS21YOR089C YGL194C-AQ2V2P6 80 aa2.79□□□□□ -1.96
VPS21YOR089C YLR412C-AQ3E742 68 aa2.79□□□□□ -1.96
VPS21YOR089C RPS28AQ3E7X9 67 aaPredicted RBP2.79□□□□□ -1.96
VPS21YOR089C PET20Q99373 253 aa2.79□□□□□ -1.96
VPS21YOR089C COX5BP00425 151 aa2.78□□□□□ -1.96
VPS21YOR089C YFR010W-AP0C5N0 62 aa2.78□□□□□ -1.96
VPS21YOR089C SEN2P16658 377 aa2.78□□□□□ -1.96
VPS21YOR089C EMP24P32803 203 aaKnown RBP2.78□□□□□ -1.96
VPS21YOR089C SVP26P38869 228 aa2.78□□□□□ -1.96
VPS21YOR089C YNL217WP40152 326 aa2.78□□□□□ -1.96
VPS21YOR089C RFC2P40348 353 aa2.78□□□□□ -1.96
VPS21YOR089C XPT1P47165 209 aa2.78□□□□□ -1.96
VPS21YOR089C YMR295CQ03559 197 aa2.78□□□□□ -1.96
VPS21YOR089C YOL014WQ08110 124 aa2.78□□□□□ -1.96
VPS21YOR089C TEL1P38110 2787 aa2.78□□□□□ -1.96
VPS21YOR089C GCN1P33892 2672 aaKnown RBP2.77□□□□□ -1.97
VPS21YOR089C YAR023CD6VPM8 179 aa2.77□□□□□ -1.97
VPS21YOR089C RPL40AP0CH08 128 aaKnown RBP2.77□□□□□ -1.97
VPS21YOR089C RPL40BP0CH09 128 aaKnown RBP2.77□□□□□ -1.97
VPS21YOR089C YBR209WP38311 105 aa2.77□□□□□ -1.97
VPS21YOR089C SWM2P40342 146 aa2.77□□□□□ -1.97
VPS21YOR089C ANT1Q06497 328 aa2.77□□□□□ -1.97
VPS21YOR089C HUT1Q12520 339 aa2.77□□□□□ -1.97
VPS21YOR089C Q0144Q9ZZW2 109 aa2.77□□□□□ -1.97
VPS21YOR089C RPL30P14120 105 aaKnown RBP2.76□□□□□ -1.97
VPS21YOR089C YBL010CP32788 280 aa2.76□□□□□ -1.97
VPS21YOR089C DER1P38307 211 aa2.76□□□□□ -1.97
VPS21YOR089C EST3Q03096 181 aa2.76□□□□□ -1.97
VPS21YOR089C DIG2Q03373 323 aaKnown RBP2.76□□□□□ -1.97
VPS21YOR089C VPS71Q03433 280 aa2.76□□□□□ -1.97
VPS21YOR089C THI74Q04083 370 aa2.76□□□□□ -1.97
VPS21YOR089C YDR391CQ04170 232 aa2.76□□□□□ -1.97
VPS21YOR089C SCP1Q08873 200 aa2.76□□□□□ -1.97
VPS21YOR089C YDL180WQ12301 547 aa2.76□□□□□ -1.97
VPS21YOR089C ATG40Q99325 256 aa2.76□□□□□ -1.97
VPS21YOR089C SEC16P48415 2195 aaKnown RBP2.76□□□□□ -1.97
VPS21YOR089C SPO13P23624 291 aa2.75□□□□□ -1.97
VPS21YOR089C GCV3P39726 170 aaPredicted RBP2.75□□□□□ -1.97
VPS21YOR089C GLR1P41921 483 aaKnown RBP2.75□□□□□ -1.97
VPS21YOR089C GNA1P43577 159 aaPredicted RBP2.75□□□□□ -1.97
VPS21YOR089C SBH2P52871 88 aa2.75□□□□□ -1.97
VPS21YOR089C SHH3Q04487 196 aa2.75□□□□□ -1.97
VPS21YOR089C RFU1Q08003 200 aa2.75□□□□□ -1.97
VPS21YOR089C BLM10P43583 2143 aa2.74□□□□□ -1.97
VPS21YOR089C POR1P04840 283 aaKnown RBP2.74□□□□□ -1.97
VPS21YOR089C RPB7P34087 171 aa2.74□□□□□ -1.97
VPS21YOR089C CCS1P40202 249 aaKnown RBP2.74□□□□□ -1.97
VPS21YOR089C PHB1P40961 287 aa2.74□□□□□ -1.97
VPS21YOR089C RCE1Q03530 315 aa2.74□□□□□ -1.97
VPS21YOR089C RRT7Q07829 113 aa2.74□□□□□ -1.97
VPS21YOR089C DGK1Q12382 290 aa2.74□□□□□ -1.97
VPS21YOR089C YPR108W-AQ3E7B3 70 aa2.74□□□□□ -1.97
VPS21YOR089C YLR365WQ7LIF2 110 aa2.74□□□□□ -1.97
VPS21YOR089C YHR213W-AQ8TGT4 77 aa2.74□□□□□ -1.97
VPS21YOR089C MRS4P23500 304 aa2.73□□□□□ -1.97
VPS21YOR089C YCR101CP25607 182 aa2.73□□□□□ -1.97
VPS21YOR089C YHR022CP38763 256 aa2.73□□□□□ -1.97
VPS21YOR089C VTC1P40046 129 aaRIP-Chip data2.73□□□□□ -1.97not detected
VPS21YOR089C FLX1P40464 311 aa2.73□□□□□ -1.97
VPS21YOR089C YFL019CP43576 117 aa2.73□□□□□ -1.97
VPS21YOR089C SOL1P50278 321 aa2.73□□□□□ -1.97
VPS21YOR089C RGM1Q00453 211 aa2.73□□□□□ -1.97
VPS21YOR089C VPS28Q02767 242 aa2.73□□□□□ -1.97
VPS21YOR089C RAF1Q06891 181 aa2.73□□□□□ -1.97
VPS21YOR089C YOL118CQ08259 102 aa2.73□□□□□ -1.97
VPS21YOR089C FIT3Q08907 204 aa2.73□□□□□ -1.97
VPS21YOR089C VMA9Q3E7B6 73 aa2.73□□□□□ -1.97
VPS21YOR089C UBI4P0CG63 381 aaKnown RBP2.72□□□□□ -1.97
VPS21YOR089C PBI2P0CT04 75 aaKnown RBP2.72□□□□□ -1.97
VPS21YOR089C DSE2P38844 325 aa2.72□□□□□ -1.97
VPS21YOR089C YEA6P39953 335 aa2.72□□□□□ -1.97
VPS21YOR089C RPL13BP40212 199 aaKnown RBP2.72□□□□□ -1.97
VPS21YOR089C AGE2P40529 298 aa2.72□□□□□ -1.97
VPS21YOR089C TTI2P47168 421 aa2.72□□□□□ -1.97
VPS21YOR089C YNR077CP53758 84 aa2.72□□□□□ -1.97
VPS21YOR089C HSK3P69852 69 aa2.72□□□□□ -1.97
VPS21YOR089C CYT2Q00873 224 aa2.72□□□□□ -1.97
VPS21YOR089C YDC1Q02896 317 aa2.72□□□□□ -1.97
VPS21YOR089C CUE4Q04201 117 aaPredicted RBP2.72□□□□□ -1.97
VPS21YOR089C RPL13AQ12690 199 aaPredicted RBP2.72□□□□□ -1.97
VPS21YOR089C YLR146W-AQ2V2P1 62 aa2.72□□□□□ -1.97
VPS21YOR089C YOR192C-CQ3E736 78 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms