RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS27	YNR006W	RAS2	P01120	322 aa	Known RBP	2.64	□□□□□ -1.99
VPS27	YNR006W	NMT1	P14743	455 aa		2.64	□□□□□ -1.99
VPS27	YNR006W	CIS3	P47001	227 aa		2.64	□□□□□ -1.99
VPS27	YNR006W	FYV7	Q12247	151 aa		2.64	□□□□□ -1.99
VPS27	YNR006W	ADE6	P38972	1358 aa	Known RBP	2.64	□□□□□ -1.99
VPS27	YNR006W	YRF1-2	P40105	1681 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	GPA2	P10823	449 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	MDH2	P22133	377 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	YCR050C	P25630	102 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	PHS1	P40857	217 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	TMA23	Q03525	211 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	DML1	Q03652	475 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	YLR422W	Q06409	1932 aa		2.63	□□□□□ -1.99
VPS27	YNR006W	ERV15	P38312	142 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	SAY1	P53324	424 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	SAE3	P89114	91 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	RDS3	Q06835	107 aa	Predicted RBP	2.62	□□□□□ -1.99
VPS27	YNR006W	RRT7	Q07829	113 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	SCS22	Q6Q595	175 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	INO4	P13902	151 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	MPM1	P40364	252 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	YDL241W	Q07738	123 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
VPS27	YNR006W	YLR042C	Q07990	161 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	YPL225W	Q08971	146 aa	Known RBP	2.62	□□□□□ -1.99
VPS27	YNR006W	VPS68	Q12016	184 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	YPR013C	Q12145	317 aa		2.62	□□□□□ -1.99
VPS27	YNR006W	YER039C-A	P0CD97	72 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	PEX4	P29340	183 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	GAT4	P40569	121 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	NSE4	P43124	402 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	UPS1	Q05776	175 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	HUT1	Q12520	339 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	DDP1	Q99321	188 aa	Known RBP	2.61	□□□□□ -1.99
VPS27	YNR006W	YRF1-3	P0CX14	1859 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	YRF1-7	P0CX15	1859 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	YRF1-6	P53819	1859 aa		2.61	□□□□□ -1.99
VPS27	YNR006W	PHO88	P38264	188 aa	Predicted RBP	2.6	□□□□□ -1.99
VPS27	YNR006W	YHL042W	P38729	150 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	YPR195C	Q06594	109 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	ATG41	Q12048	136 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	UBR1	P19812	1950 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	ETR1	P38071	380 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	YBR209W	P38311	105 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	RPB11	P38902	120 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	YAL064W	P39711	94 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	PIR1	Q03178	341 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	CUE4	Q04201	117 aa	Predicted RBP	2.6	□□□□□ -1.99
VPS27	YNR006W	YOR289W	Q12012	251 aa	Predicted RBP	2.6	□□□□□ -1.99
VPS27	YNR006W	RAD28	Q12021	506 aa		2.6	□□□□□ -1.99
VPS27	YNR006W	FCF2	Q12035	217 aa	Predicted RBP	2.6	□□□□□ -1.99
VPS27	YNR006W	MSB2	P32334	1306 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	SEC11	P15367	167 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	SDH4	P37298	181 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	SVP26	P38869	228 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	GAA1	P39012	614 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	YEL067C	P39978	195 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	THG1	P53215	237 aa	Known RBP	2.59	□□□□□ -1.99
VPS27	YNR006W	UPS3	Q04006	179 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	UIP4	Q08926	304 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	YOR376W-A	Q3E805	51 aa		2.59	□□□□□ -1.99
VPS27	YNR006W	SPS2	P08459	502 aa		2.58	□□□□□ -2
VPS27	YNR006W	SFT2	P38166	215 aa		2.58	□□□□□ -2
VPS27	YNR006W	YHL018W	P38744	120 aa	Predicted RBP	2.58	□□□□□ -2
VPS27	YNR006W	RPS12	P48589	143 aa	Known RBP	2.58	□□□□□ -2
VPS27	YNR006W	POP3	P53833	195 aa	Predicted RBP	2.58	□□□□□ -2
VPS27	YNR006W	YHP1	Q04116	353 aa		2.58	□□□□□ -2
VPS27	YNR006W	YMR252C	Q04814	134 aa		2.58	□□□□□ -2
VPS27	YNR006W	FLX1	P40464	311 aa		2.58	□□□□□ -2
VPS27	YNR006W	SPG1	P50088	95 aa		2.58	□□□□□ -2
VPS27	YNR006W	KNH1	P50112	268 aa		2.58	□□□□□ -2
VPS27	YNR006W	DAD4	P69851	72 aa		2.58	□□□□□ -2
VPS27	YNR006W	RIM15	P43565	1770 aa		2.57	□□□□□ -2
VPS27	YNR006W	ANB1	P19211	157 aa		2.57	□□□□□ -2
VPS27	YNR006W	YOR062C	P36025	268 aa		2.57	□□□□□ -2
VPS27	YNR006W	MZM1	Q03429	123 aa	Predicted RBP	2.57	□□□□□ -2
VPS27	YNR006W	IRC19	Q07843	230 aa		2.57	□□□□□ -2
VPS27	YNR006W	YOR385W	Q08909	290 aa		2.57	□□□□□ -2
VPS27	YNR006W	FAS1	P07149	2051 aa	Known RBP	2.57	□□□□□ -2
VPS27	YNR006W	UTP10	P42945	1769 aa	Known RBP	2.56	□□□□□ -2
VPS27	YNR006W	YAR029W	P39549	74 aa		2.56	□□□□□ -2
VPS27	YNR006W	LSM8	P47093	109 aa	Known RBP	2.56	□□□□□ -2
VPS27	YNR006W	ERG25	P53045	309 aa		2.56	□□□□□ -2
VPS27	YNR006W	GRX5	Q02784	150 aa		2.56	□□□□□ -2
VPS27	YNR006W	COX8	P04039	78 aa		2.56	□□□□□ -2
VPS27	YNR006W	BUD23	P25627	275 aa	Predicted RBP	2.56	□□□□□ -2
VPS27	YNR006W	SRL3	P36167	246 aa		2.56	□□□□□ -2
VPS27	YNR006W	BAT2	P47176	376 aa	Known RBP	2.56	□□□□□ -2
VPS27	YNR006W	CWC27	Q02770	301 aa		2.56	□□□□□ -2
VPS27	YNR006W	YML079W	Q03629	201 aa		2.56	□□□□□ -2
VPS27	YNR006W	FIT2	Q08906	153 aa		2.56	□□□□□ -2
VPS27	YNR006W	UTR5	P32630	166 aa		2.55	□□□□□ -2
VPS27	YNR006W	YHR022C	P38763	256 aa		2.55	□□□□□ -2
VPS27	YNR006W	CCS1	P40202	249 aa	Known RBP	2.55	□□□□□ -2
VPS27	YNR006W	MOB1	P40484	314 aa		2.55	□□□□□ -2
VPS27	YNR006W	DAD3	P69850	94 aa		2.55	□□□□□ -2
VPS27	YNR006W	YCL001W-A	P87012	153 aa		2.55	□□□□□ -2
VPS27	YNR006W	EMC6	Q12431	108 aa		2.55	□□□□□ -2
VPS27	YNR006W	KTI11	Q3E840	82 aa		2.55	□□□□□ -2
VPS27	YNR006W	RSF2	P46974	1380 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms