RNA–Protein interactions for RNA: YMR293C

HER2, Transcript of Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex, yeastyeast

Gene HER2, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER2YMR293C AQY2P0CD90 149 aa2.36□□□□□ -2.03
HER2YMR293C RPB7P34087 171 aa2.36□□□□□ -2.03
HER2YMR293C RRT1P38192 103 aa2.36□□□□□ -2.03
HER2YMR293C TTI2P47168 421 aa2.36□□□□□ -2.03
HER2YMR293C RBL2P48606 106 aaKnown RBP2.36□□□□□ -2.03
HER2YMR293C MIX14Q04341 121 aa2.36□□□□□ -2.03
HER2YMR293C GAL83Q04739 417 aa2.36□□□□□ -2.03
HER2YMR293C PST2Q12335 198 aaKnown RBP2.36□□□□□ -2.03
HER2YMR293C RPC19P28000 142 aaKnown RBP2.35□□□□□ -2.03
HER2YMR293C GSP2P32836 220 aaKnown RBP2.35□□□□□ -2.03
HER2YMR293C FYV4P38783 130 aaPredicted RBP2.35□□□□□ -2.03
HER2YMR293C APS3P47064 194 aa2.35□□□□□ -2.03
HER2YMR293C LSM3P57743 89 aaKnown RBP2.35□□□□□ -2.03
HER2YMR293C YKR005CQ02203 525 aa2.35□□□□□ -2.03
HER2YMR293C YHR214C-DP0CX93 97 aa2.34□□□□□ -2.04
HER2YMR293C CPR5P35176 225 aa2.34□□□□□ -2.04
HER2YMR293C ALB1P47019 175 aaPredicted RBP2.34□□□□□ -2.04
HER2YMR293C SBH1P52870 82 aa2.34□□□□□ -2.04
HER2YMR293C PLP1Q04004 230 aa2.34□□□□□ -2.04
HER2YMR293C RAF1Q06891 181 aa2.34□□□□□ -2.04
HER2YMR293C YOR015WQ12169 119 aa2.34□□□□□ -2.04
HER2YMR293C YCR023CP25351 611 aa2.33□□□□□ -2.04
HER2YMR293C SBH2P52871 88 aa2.33□□□□□ -2.04
HER2YMR293C BPH1P25356 2167 aa2.32□□□□□ -2.04
HER2YMR293C VAR1P02381 398 aa2.32□□□□□ -2.04
HER2YMR293C BUD23P25627 275 aaPredicted RBP2.32□□□□□ -2.04
HER2YMR293C UTP11P34247 250 aaPredicted RBP2.32□□□□□ -2.04
HER2YMR293C SMX2P40204 77 aaKnown RBP2.32□□□□□ -2.04
HER2YMR293C YIR020CP40575 100 aa2.32□□□□□ -2.04
HER2YMR293C YPR127WQ06494 345 aa2.32□□□□□ -2.04
HER2YMR293C VPS51P36116 164 aa2.31□□□□□ -2.04
HER2YMR293C FES1P38260 290 aa2.31□□□□□ -2.04
HER2YMR293C YEL008WP40001 126 aa2.31□□□□□ -2.04
HER2YMR293C YFL051CP43552 160 aa2.31□□□□□ -2.04
HER2YMR293C YOR381W-AQ3E804 55 aa2.31□□□□□ -2.04
HER2YMR293C YBR032WP38223 100 aa2.3□□□□□ -2.04
HER2YMR293C MPM1P40364 252 aa2.3□□□□□ -2.04
HER2YMR293C NSE4P43124 402 aa2.3□□□□□ -2.04
HER2YMR293C XPT1P47165 209 aa2.3□□□□□ -2.04
HER2YMR293C HSK3P69852 69 aa2.3□□□□□ -2.04
HER2YMR293C NHP10Q03435 203 aa2.3□□□□□ -2.04
HER2YMR293C RRP17Q04031 235 aaPredicted RBP2.3□□□□□ -2.04
HER2YMR293C YOR214CQ12282 236 aa2.3□□□□□ -2.04
HER2YMR293C HSP30P25619 332 aa2.29□□□□□ -2.04
HER2YMR293C YBR242WP38331 238 aa2.29□□□□□ -2.04
HER2YMR293C YEL067CP39978 195 aa2.29□□□□□ -2.04
HER2YMR293C YPR202WQ08993 238 aa2.29□□□□□ -2.04
HER2YMR293C RTR2Q12378 196 aa2.29□□□□□ -2.04
HER2YMR293C YGR035W-AQ45U48 73 aa2.29□□□□□ -2.04
HER2YMR293C CMD1P06787 147 aaKnown RBP2.28□□□□□ -2.04
HER2YMR293C TMA20P89886 181 aaPredicted RBP2.28□□□□□ -2.04
HER2YMR293C DML1Q03652 475 aa2.28□□□□□ -2.04
HER2YMR293C UPS3Q04006 179 aa2.28□□□□□ -2.04
HER2YMR293C YHP1Q04116 353 aa2.28□□□□□ -2.04
HER2YMR293C RIM9Q04734 239 aa2.28□□□□□ -2.04
HER2YMR293C YDR278CQ05612 105 aa2.28□□□□□ -2.04
HER2YMR293C UPS1Q05776 175 aa2.28□□□□□ -2.04
HER2YMR293C COA4Q05809 96 aa2.28□□□□□ -2.04
HER2YMR293C CMC2Q3E7A4 109 aa2.28□□□□□ -2.04
HER2YMR293C HSP150P32478 413 aa2.27□□□□□ -2.05
HER2YMR293C YER121WP40076 114 aa2.27□□□□□ -2.05
HER2YMR293C FMN1Q03778 218 aa2.27□□□□□ -2.05
HER2YMR293C UIP4Q08926 304 aa2.27□□□□□ -2.05
HER2YMR293C STF2P16965 84 aa2.26□□□□□ -2.05
HER2YMR293C RPL22BP56628 122 aaKnown RBP2.26□□□□□ -2.05
HER2YMR293C VPS28Q02767 242 aa2.26□□□□□ -2.05
HER2YMR293C COA3Q3E7B2 85 aa2.26□□□□□ -2.05
HER2YMR293C NMT1P14743 455 aa2.25□□□□□ -2.05
HER2YMR293C CSH1P38287 376 aa2.25□□□□□ -2.05
HER2YMR293C VMA10P48836 114 aaKnown RBP2.25□□□□□ -2.05
HER2YMR293C YGL235WP53071 178 aa2.25□□□□□ -2.05
HER2YMR293C NCE101Q02820 53 aa2.25□□□□□ -2.05
HER2YMR293C SEN2P16658 377 aa2.24□□□□□ -2.05
HER2YMR293C YRA2P36036 203 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
HER2YMR293C PDX3P38075 228 aaKnown RBP2.24□□□□□ -2.05
HER2YMR293C RPS12P48589 143 aaKnown RBP2.24□□□□□ -2.05
HER2YMR293C GRX5Q02784 150 aa2.24□□□□□ -2.05
HER2YMR293C YDR476CQ03362 224 aa2.24□□□□□ -2.05
HER2YMR293C ETR1P38071 380 aa2.23□□□□□ -2.05
HER2YMR293C SIP18P50263 79 aa2.23□□□□□ -2.05
HER2YMR293C THI74Q04083 370 aa2.23□□□□□ -2.05
HER2YMR293C ATG41Q12048 136 aa2.23□□□□□ -2.05
HER2YMR293C SLH1P53327 1967 aaKnown RBP2.23□□□□□ -2.05
HER2YMR293C YHR212W-AP0CX91 67 aa2.23□□□□□ -2.05
HER2YMR293C YBL010CP32788 280 aa2.23□□□□□ -2.05
HER2YMR293C FIG1P38224 298 aa2.23□□□□□ -2.05
HER2YMR293C YER137CP40083 148 aaKnown RBP2.23□□□□□ -2.05
HER2YMR293C EFM5P53200 248 aaKnown RBP2.23□□□□□ -2.05
HER2YMR293C SED1Q01589 338 aa2.23□□□□□ -2.05
HER2YMR293C YLR053CQ12026 108 aa2.23□□□□□ -2.05
HER2YMR293C MHF1Q3E835 90 aa2.23□□□□□ -2.05
HER2YMR293C TAR1Q8TGM6 124 aa2.23□□□□□ -2.05
HER2YMR293C VMA7P39111 118 aa2.22□□□□□ -2.05
HER2YMR293C GLR1P41921 483 aaKnown RBP2.22□□□□□ -2.05
HER2YMR293C PAC10P48363 199 aa2.22□□□□□ -2.05
HER2YMR293C ELP6Q04868 273 aa2.22□□□□□ -2.05
HER2YMR293C YOR289WQ12012 251 aaPredicted RBP2.22□□□□□ -2.05
HER2YMR293C RPS1AP33442 255 aaKnown RBP2.21□□□□□ -2.06
HER2YMR293C ECM31P38122 312 aa2.21□□□□□ -2.06
HER2YMR293C CCS1P40202 249 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms