RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W PIR5P46999 287 aa3.43□□□□□ -1.86
ROT1YMR200W PIN3Q06449 215 aa3.43□□□□□ -1.86
ROT1YMR200W NTE1Q04958 1679 aa3.43□□□□□ -1.86
ROT1YMR200W RPO21P04050 1733 aaKnown RBP3.42□□□□□ -1.86
ROT1YMR200W HSP26P15992 214 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
ROT1YMR200W YCR099CP25657 155 aa3.42□□□□□ -1.86
ROT1YMR200W SRL3P36167 246 aa3.42□□□□□ -1.86
ROT1YMR200W THG1P53215 237 aaKnown RBP3.42□□□□□ -1.86
ROT1YMR200W ATP19P81451 68 aa3.42□□□□□ -1.86
ROT1YMR200W PIR1Q03178 341 aa3.42□□□□□ -1.86
ROT1YMR200W YOR376W-AQ3E805 51 aa3.42□□□□□ -1.86
ROT1YMR200W ATG40Q99325 256 aa3.42□□□□□ -1.86
ROT1YMR200W PDR11P40550 1411 aa3.42□□□□□ -1.86
ROT1YMR200W ADE6P38972 1358 aaKnown RBP3.41□□□□□ -1.86
ROT1YMR200W PDR12Q02785 1511 aa3.41□□□□□ -1.86
ROT1YMR200W RPS23AP0CX29 145 aaKnown RBP3.41□□□□□ -1.86
ROT1YMR200W RPS23BP0CX30 145 aa3.41□□□□□ -1.86
ROT1YMR200W CLB6P32943 380 aa3.41□□□□□ -1.86
ROT1YMR200W TMA19P35691 167 aaKnown RBP3.41□□□□□ -1.86
ROT1YMR200W YHL042WP38729 150 aa3.41□□□□□ -1.86
ROT1YMR200W MZM1Q03429 123 aaPredicted RBP3.41□□□□□ -1.86
ROT1YMR200W UPS3Q04006 179 aa3.41□□□□□ -1.86
ROT1YMR200W YHP1Q04116 353 aa3.41□□□□□ -1.86
ROT1YMR200W YMR103CQ04436 120 aa3.41□□□□□ -1.86
ROT1YMR200W KEI1Q06346 221 aa3.41□□□□□ -1.86
ROT1YMR200W YOR385WQ08909 290 aa3.41□□□□□ -1.86
ROT1YMR200W YEL045CP32616 141 aa3.4□□□□□ -1.87
ROT1YMR200W UBR1P19812 1950 aa3.4□□□□□ -1.87
ROT1YMR200W MIG1P27705 504 aa3.39□□□□□ -1.87
ROT1YMR200W SCM4P32564 187 aa3.39□□□□□ -1.87
ROT1YMR200W UTH1P36135 365 aa3.39□□□□□ -1.87
ROT1YMR200W YJL027CP47063 138 aaPredicted RBP3.39□□□□□ -1.87
ROT1YMR200W NHP10Q03435 203 aa3.39□□□□□ -1.87
ROT1YMR200W TMC1Q08422 150 aaPredicted RBP3.39□□□□□ -1.87
ROT1YMR200W YOR015WQ12169 119 aa3.39□□□□□ -1.87
ROT1YMR200W YLR236CA0A023PZG4 107 aa3.38□□□□□ -1.87
ROT1YMR200W COX5BP00425 151 aa3.38□□□□□ -1.87
ROT1YMR200W INO4P13902 151 aa3.38□□□□□ -1.87
ROT1YMR200W YEL067CP39978 195 aa3.38□□□□□ -1.87
ROT1YMR200W YFR035CP43608 114 aa3.38□□□□□ -1.87
ROT1YMR200W CIS3P47001 227 aa3.38□□□□□ -1.87
ROT1YMR200W YDR114CQ04597 100 aa3.38□□□□□ -1.87
ROT1YMR200W SOM1Q05676 74 aa3.38□□□□□ -1.87
ROT1YMR200W YDL241WQ07738 123 aa3.38□□□□□ -1.87
ROT1YMR200W ATG41Q12048 136 aa3.38□□□□□ -1.87
ROT1YMR200W YPR013CQ12145 317 aa3.38□□□□□ -1.87
ROT1YMR200W GTT2Q12390 233 aa3.38□□□□□ -1.87
ROT1YMR200W RPL13AQ12690 199 aaPredicted RBP3.38□□□□□ -1.87
ROT1YMR200W YCR075W-AQ3E830 75 aa3.38□□□□□ -1.87
ROT1YMR200W MED11Q99278 115 aa3.38□□□□□ -1.87
ROT1YMR200W NUP170P38181 1502 aa3.38□□□□□ -1.87
ROT1YMR200W IQG1Q12280 1495 aa3.37□□□□□ -1.87
ROT1YMR200W QCR10P37299 77 aa3.37□□□□□ -1.87
ROT1YMR200W ERV15P38312 142 aa3.37□□□□□ -1.87
ROT1YMR200W CCS1P40202 249 aaKnown RBP3.37□□□□□ -1.87
ROT1YMR200W TIR3P40552 269 aa3.37□□□□□ -1.87
ROT1YMR200W ERG25P53045 309 aa3.37□□□□□ -1.87
ROT1YMR200W YML079WQ03629 201 aa3.37□□□□□ -1.87
ROT1YMR200W RAF1Q06891 181 aa3.37□□□□□ -1.87
ROT1YMR200W GDB1Q06625 1536 aa3.37□□□□□ -1.87
ROT1YMR200W SPO14P36126 1683 aa3.36□□□□□ -1.87
ROT1YMR200W YGL041W-AP0C5N3 154 aa3.36□□□□□ -1.87
ROT1YMR200W MRPS9P38120 278 aa3.36□□□□□ -1.87
ROT1YMR200W YIL059CP40520 121 aa3.36□□□□□ -1.87
ROT1YMR200W BOL2P53082 120 aa3.36□□□□□ -1.87
ROT1YMR200W CUE4Q04201 117 aaPredicted RBP3.36□□□□□ -1.87
ROT1YMR200W IRC19Q07843 230 aa3.36□□□□□ -1.87
ROT1YMR200W IRC20Q06554 1556 aa3.36□□□□□ -1.87
ROT1YMR200W MSB2P32334 1306 aa3.36□□□□□ -1.87
ROT1YMR200W ULS1Q08562 1619 aa3.36□□□□□ -1.87
ROT1YMR200W GEA1P47102 1408 aaPredicted RBP3.36□□□□□ -1.87
ROT1YMR200W PDR15Q04182 1529 aaKnown RBP3.35□□□□□ -1.87
ROT1YMR200W KNH1P50112 268 aa3.35□□□□□ -1.87
ROT1YMR200W YPR195CQ06594 109 aa3.35□□□□□ -1.87
ROT1YMR200W YPR174CQ06616 221 aaPredicted RBP3.35□□□□□ -1.87
ROT1YMR200W MLP2P40457 1679 aa3.34□□□□□ -1.87
ROT1YMR200W PRE1P22141 198 aaKnown RBP3.34□□□□□ -1.87
ROT1YMR200W PEX4P29340 183 aa3.34□□□□□ -1.87
ROT1YMR200W YBR209WP38311 105 aa3.34□□□□□ -1.87
ROT1YMR200W YER084WP40057 128 aa3.34□□□□□ -1.87
ROT1YMR200W YMR090WQ04304 227 aaKnown RBP3.34□□□□□ -1.87
ROT1YMR200W RAD28Q12021 506 aa3.34□□□□□ -1.87
ROT1YMR200W CAT8P39113 1433 aa3.34□□□□□ -1.88
ROT1YMR200W PDR10P51533 1564 aa3.34□□□□□ -1.88
ROT1YMR200W BUD3P25558 1636 aa3.33□□□□□ -1.88
ROT1YMR200W YLR422WQ06409 1932 aa3.33□□□□□ -1.88
ROT1YMR200W RPL26AP05743 127 aaKnown RBP3.33□□□□□ -1.88
ROT1YMR200W FYV5P25585 152 aa3.33□□□□□ -1.88
ROT1YMR200W YKL044WP36092 106 aa3.33□□□□□ -1.88
ROT1YMR200W SNF11P38956 169 aa3.33□□□□□ -1.88
ROT1YMR200W YGR269WP40326 108 aa3.33□□□□□ -1.88
ROT1YMR200W RPL26BP53221 127 aaKnown RBP3.33□□□□□ -1.88
ROT1YMR200W FIT1Q04433 528 aa3.33□□□□□ -1.88
ROT1YMR200W SCP1Q08873 200 aa3.33□□□□□ -1.88
ROT1YMR200W DNF2Q12675 1612 aa3.33□□□□□ -1.88
ROT1YMR200W MRPL44P19956 98 aa3.32□□□□□ -1.88
ROT1YMR200W NMA1Q06178 401 aaKnown RBP3.32□□□□□ -1.88
ROT1YMR200W YGL194C-AQ2V2P6 80 aa3.32□□□□□ -1.88
ROT1YMR200W YSP2Q06681 1438 aa3.32□□□□□ -1.88
ROT1YMR200W TY3B-GQ99315 1547 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms