RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C SEC16P48415 2195 aaKnown RBP-0.84□□□□□ -2.54
VPS20YMR077C CSF1Q12150 2958 aa-0.84□□□□□ -2.54
VPS20YMR077C PFY1P07274 126 aa-0.85□□□□□ -2.55
VPS20YMR077C APQ12P40532 138 aa-0.85□□□□□ -2.55
VPS20YMR077C YPL067CQ02754 198 aa-0.85□□□□□ -2.55
VPS20YMR077C UBR1P19812 1950 aa-0.85□□□□□ -2.55
VPS20YMR077C YRF1-3P0CX14 1859 aa-0.86□□□□□ -2.55
VPS20YMR077C YRF1-7P0CX15 1859 aa-0.86□□□□□ -2.55
VPS20YMR077C BUB2P26448 306 aaPredicted RBP-0.86□□□□□ -2.55
VPS20YMR077C EMP24P32803 203 aaKnown RBP-0.86□□□□□ -2.55
VPS20YMR077C MRPL11P36521 249 aaPredicted RBP-0.86□□□□□ -2.55
VPS20YMR077C SFT2P38166 215 aa-0.86□□□□□ -2.55
VPS20YMR077C ATX1P38636 73 aa-0.86□□□□□ -2.55
VPS20YMR077C PHB1P40961 287 aa-0.86□□□□□ -2.55
VPS20YMR077C YDR476CQ03362 224 aa-0.86□□□□□ -2.55
VPS20YMR077C SOM1Q05676 74 aa-0.86□□□□□ -2.55
VPS20YMR077C YLR296WQ05898 108 aa-0.86□□□□□ -2.55
VPS20YMR077C RPL35AP0CX84 120 aaKnown RBP-0.87□□□□□ -2.55
VPS20YMR077C RPL35BP0CX85 120 aaKnown RBP-0.87□□□□□ -2.55
VPS20YMR077C SRX1P36077 127 aa-0.87□□□□□ -2.55
VPS20YMR077C YEA6P39953 335 aa-0.87□□□□□ -2.55
VPS20YMR077C VPS55P47111 140 aa-0.87□□□□□ -2.55
VPS20YMR077C MAK3Q03503 176 aa-0.87□□□□□ -2.55
VPS20YMR077C NAT5Q08689 176 aa-0.87□□□□□ -2.55
VPS20YMR077C EGD2P38879 174 aaKnown RBP-0.88□□□□□ -2.55
VPS20YMR077C BRP1P53194 125 aa-0.88□□□□□ -2.55
VPS20YMR077C ARL3Q02804 198 aa-0.88□□□□□ -2.55
VPS20YMR077C MED11Q99278 115 aa-0.88□□□□□ -2.55
VPS20YMR077C DDP1Q99321 188 aaKnown RBP-0.88□□□□□ -2.55
VPS20YMR077C GIM3P53900 129 aa-0.89□□□□□ -2.55
VPS20YMR077C COF1Q03048 143 aaKnown RBP-0.89□□□□□ -2.55
VPS20YMR077C RAF1Q06891 181 aa-0.89□□□□□ -2.55
VPS20YMR077C SNT2P53127 1403 aa-0.89□□□□□ -2.55
VPS20YMR077C YNL190WP53872 204 aa-0.9□□□□□ -2.55
VPS20YMR077C ATP14Q12349 124 aa-0.9□□□□□ -2.55
VPS20YMR077C HSP12P22943 109 aaKnown RBP-0.91□□□□□ -2.56
VPS20YMR077C FIG1P38224 298 aa-0.91□□□□□ -2.56
VPS20YMR077C YLR053CQ12026 108 aa-0.91□□□□□ -2.56
VPS20YMR077C RTC6O14464 93 aa-0.92□□□□□ -2.56
VPS20YMR077C YGL149WP53116 101 aa-0.92□□□□□ -2.56
VPS20YMR077C LCL1Q02786 101 aa-0.92□□□□□ -2.56
VPS20YMR077C YOR385WQ08909 290 aa-0.92□□□□□ -2.56
VPS20YMR077C GTT2Q12390 233 aa-0.92□□□□□ -2.56
VPS20YMR077C YBR072C-AQ3E794 53 aa-0.92□□□□□ -2.56
VPS20YMR077C SUA7P29055 345 aaPredicted RBP-0.93□□□□□ -2.56
VPS20YMR077C LSM1P47017 172 aaKnown RBP-0.93□□□□□ -2.56
VPS20YMR077C LDB18Q07887 179 aa-0.93□□□□□ -2.56
VPS20YMR077C TOR1P35169 2470 aa-0.94□□□□□ -2.56
VPS20YMR077C GSP1P32835 219 aaKnown RBP-0.94□□□□□ -2.56
VPS20YMR077C YIL163CP40448 117 aa-0.94□□□□□ -2.56
VPS20YMR077C YGR240C-AQ3E786 66 aa-0.94□□□□□ -2.56
VPS20YMR077C PBI2P0CT04 75 aaKnown RBP-0.95□□□□□ -2.56
VPS20YMR077C YHR173CP38864 112 aa-0.95□□□□□ -2.56
VPS20YMR077C AIM18P38884 321 aa-0.95□□□□□ -2.56
VPS20YMR077C YGR201CP42936 225 aa-0.95□□□□□ -2.56
VPS20YMR077C MRPL44P19956 98 aa-0.96□□□□□ -2.56
VPS20YMR077C EFG1Q3E705 233 aaKnown RBP-0.96□□□□□ -2.56
VPS20YMR077C TY4B-HP0C2J7 1802 aa-0.96□□□□□ -2.56
VPS20YMR077C ICS3P47034 131 aa-0.97□□□□□ -2.56
VPS20YMR077C YGR017WP53210 297 aa-0.97□□□□□ -2.56
VPS20YMR077C OCA6Q12454 224 aa-0.97□□□□□ -2.56
VPS20YMR077C HAP3P13434 144 aa-0.98□□□□□ -2.57
VPS20YMR077C LSM8P47093 109 aaKnown RBP-0.98□□□□□ -2.57
VPS20YMR077C HHO1P53551 258 aa-0.98□□□□□ -2.57
VPS20YMR077C MRPS12P53732 153 aa-0.98□□□□□ -2.57
VPS20YMR077C FCF2Q12035 217 aaPredicted RBP-0.98□□□□□ -2.57
VPS20YMR077C ENV10Q99382 181 aa-0.98□□□□□ -2.57
VPS20YMR077C UTP20P35194 2493 aaKnown RBP-0.98□□□□□ -2.57
VPS20YMR077C RPS1AP33442 255 aaKnown RBP-0.99□□□□□ -2.57
VPS20YMR077C GRX3Q03835 250 aa-0.99□□□□□ -2.57
VPS20YMR077C GIM5Q04493 163 aa-0.99□□□□□ -2.57
VPS20YMR077C PET20Q99373 253 aa-0.99□□□□□ -2.57
VPS20YMR077C RPA12P32529 125 aaKnown RBP-1□□□□□ -2.57
VPS20YMR077C SUI1P32911 108 aaKnown RBP-1□□□□□ -2.57
VPS20YMR077C PAU21P0CE86 164 aa-1.01□□□□□ -2.57
VPS20YMR077C PAU22P0CE87 164 aa-1.01□□□□□ -2.57
VPS20YMR077C VPS51P36116 164 aa-1.01□□□□□ -2.57
VPS20YMR077C RPS28BP0C0X0 67 aaKnown RBP-1.02□□□□□ -2.57
VPS20YMR077C QCR10P37299 77 aa-1.02□□□□□ -2.57
VPS20YMR077C SDH7Q04401 133 aa-1.02□□□□□ -2.57
VPS20YMR077C RPS28AQ3E7X9 67 aaPredicted RBP-1.02□□□□□ -2.57
VPS20YMR077C IRA1P18963 3092 aa-1.02□□□□□ -2.57
VPS20YMR077C PRS3P38689 320 aaKnown RBP-1.03□□□□□ -2.57
VPS20YMR077C SPG1P50088 95 aa-1.03□□□□□ -2.57
VPS20YMR077C EFM5P53200 248 aaKnown RBP-1.03□□□□□ -2.57
VPS20YMR077C QCR2P07257 368 aa-1.04□□□□□ -2.58
VPS20YMR077C SGF11Q03067 99 aa-1.04□□□□□ -2.58
VPS20YMR077C CCW14O13547 238 aa-1.05□□□□□ -2.58
VPS20YMR077C RAV2Q03956 351 aa-1.05□□□□□ -2.58
VPS20YMR077C ATG38Q05789 226 aaKnown RBP-1.05□□□□□ -2.58
VPS20YMR077C NSL1Q12143 216 aa-1.05□□□□□ -2.58
VPS20YMR077C YGL041C-BQ3E750 60 aa-1.05□□□□□ -2.58
VPS20YMR077C RSF2P46974 1380 aa-1.06□□□□□ -2.58
VPS20YMR077C HSP10P38910 106 aa-1.06□□□□□ -2.58
VPS20YMR077C SEC7P11075 2009 aaKnown RBP-1.06□□□□□ -2.58
VPS20YMR077C DER1P38307 211 aa-1.07□□□□□ -2.58
VPS20YMR077C AME1P38313 324 aa-1.07□□□□□ -2.58
VPS20YMR077C YRF1-6P53819 1859 aa-1.07□□□□□ -2.58
VPS20YMR077C URB1P34241 1764 aaKnown RBP-1.08□□□□□ -2.58
VPS20YMR077C RPL36BO14455 100 aaKnown RBP-1.08□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 130.5 ms