RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W MED11Q99278 115 aa1.24□□□□□ -2.21
CSI1YMR025W HTB1P02293 131 aaKnown RBP1.23□□□□□ -2.21
CSI1YMR025W YLR156WP0CE96 114 aa1.23□□□□□ -2.21
CSI1YMR025W YLR159WP0CE97 114 aa1.23□□□□□ -2.21
CSI1YMR025W YLR161WP0CE98 114 aa1.23□□□□□ -2.21
CSI1YMR025W OCH1P31755 480 aa1.23□□□□□ -2.21
CSI1YMR025W AUA1P32450 94 aa1.23□□□□□ -2.21
CSI1YMR025W YRA2P36036 203 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
CSI1YMR025W YKR045CP36138 183 aa1.23□□□□□ -2.21
CSI1YMR025W YHR138CP38841 114 aaPredicted RBP1.23□□□□□ -2.21
CSI1YMR025W YKE4P40544 346 aa1.23□□□□□ -2.21
CSI1YMR025W YFR035CP43608 114 aa1.23□□□□□ -2.21
CSI1YMR025W DOC1P53068 250 aa1.23□□□□□ -2.21
CSI1YMR025W DID2P69771 204 aa1.23□□□□□ -2.21
CSI1YMR025W YML108WQ03759 105 aa1.23□□□□□ -2.21
CSI1YMR025W HRD1Q08109 551 aa1.23□□□□□ -2.21
CSI1YMR025W YPL225WQ08971 146 aaKnown RBP1.23□□□□□ -2.21
CSI1YMR025W YPR108W-AQ3E7B3 70 aa1.23□□□□□ -2.21
CSI1YMR025W YLR365WQ7LIF2 110 aa1.23□□□□□ -2.21
CSI1YMR025W ODC2Q99297 307 aa1.23□□□□□ -2.21
CSI1YMR025W DDI2P0CH63 225 aa1.22□□□□□ -2.21
CSI1YMR025W DDI3P0CH64 225 aa1.22□□□□□ -2.21
CSI1YMR025W STF2P16965 84 aa1.22□□□□□ -2.21
CSI1YMR025W ROX3P25046 220 aa1.22□□□□□ -2.21
CSI1YMR025W MRPL38P35996 138 aaPredicted RBP1.22□□□□□ -2.21
CSI1YMR025W FMP23P38231 175 aa1.22□□□□□ -2.21
CSI1YMR025W PDS1P40316 373 aaPredicted RBP1.22□□□□□ -2.21
CSI1YMR025W PGD1P40356 397 aa1.22□□□□□ -2.21
CSI1YMR025W RPL33BP41056 107 aaKnown RBP1.22□□□□□ -2.21
CSI1YMR025W PAM16P42949 149 aa1.22□□□□□ -2.21
CSI1YMR025W DIE2P50076 525 aa1.22□□□□□ -2.21
CSI1YMR025W PDR17P53844 350 aa1.22□□□□□ -2.21
CSI1YMR025W GIM3P53900 129 aa1.22□□□□□ -2.21
CSI1YMR025W BUD25P85052 153 aa1.22□□□□□ -2.21
CSI1YMR025W YDR274CP87283 123 aa1.22□□□□□ -2.21
CSI1YMR025W YOL118CQ08259 102 aa1.22□□□□□ -2.21
CSI1YMR025W RAD28Q12021 506 aa1.22□□□□□ -2.21
CSI1YMR025W SEC4P07560 215 aaKnown RBP1.21□□□□□ -2.22
CSI1YMR025W GCN3P14741 305 aa1.21□□□□□ -2.22
CSI1YMR025W YPT31P38555 223 aaKnown RBP1.21□□□□□ -2.22
CSI1YMR025W YJL218WP40892 196 aaKnown RBP1.21□□□□□ -2.22
CSI1YMR025W RBL2P48606 106 aaKnown RBP1.21□□□□□ -2.22
CSI1YMR025W YGR042WP53227 271 aa1.21□□□□□ -2.22
CSI1YMR025W YNR077CP53758 84 aa1.21□□□□□ -2.22
CSI1YMR025W MAK3Q03503 176 aa1.21□□□□□ -2.22
CSI1YMR025W SCP1Q08873 200 aa1.21□□□□□ -2.22
CSI1YMR025W YGL258W-AQ3E740 77 aa1.21□□□□□ -2.22
CSI1YMR025W HTB2P02294 131 aa1.2□□□□□ -2.22
CSI1YMR025W CDC7P06243 507 aa1.2□□□□□ -2.22
CSI1YMR025W RPL27BP0C2H7 136 aaKnown RBP1.2□□□□□ -2.22
CSI1YMR025W SEN2P16658 377 aa1.2□□□□□ -2.22
CSI1YMR025W MRS4P23500 304 aa1.2□□□□□ -2.22
CSI1YMR025W TRR1P29509 319 aaKnown RBP1.2□□□□□ -2.22
CSI1YMR025W FPR2P32472 135 aa1.2□□□□□ -2.22
CSI1YMR025W MRPL28P36527 147 aa1.2□□□□□ -2.22
CSI1YMR025W DSE2P38844 325 aa1.2□□□□□ -2.22
CSI1YMR025W SNF11P38956 169 aa1.2□□□□□ -2.22
CSI1YMR025W LST8P41318 303 aa1.2□□□□□ -2.22
CSI1YMR025W IRC18P47056 224 aa1.2□□□□□ -2.22
CSI1YMR025W ARP3P47117 449 aaKnown RBP1.2□□□□□ -2.22
CSI1YMR025W ARO8P53090 500 aaKnown RBP1.2□□□□□ -2.22
CSI1YMR025W YGR050CP53231 118 aa1.2□□□□□ -2.22
CSI1YMR025W COX12Q01519 83 aa1.2□□□□□ -2.22
CSI1YMR025W EST3Q03096 181 aa1.2□□□□□ -2.22
CSI1YMR025W KEI1Q06346 221 aa1.2□□□□□ -2.22
CSI1YMR025W YLR031WQ07978 186 aa1.2□□□□□ -2.22
CSI1YMR025W YOR385WQ08909 290 aa1.2□□□□□ -2.22
CSI1YMR025W YPL162CQ12042 273 aa1.2□□□□□ -2.22
CSI1YMR025W ATG41Q12048 136 aa1.2□□□□□ -2.22
CSI1YMR025W HUG1Q6Q5K6 68 aa1.2□□□□□ -2.22
CSI1YMR025W QCR2P07257 368 aa1.19□□□□□ -2.22
CSI1YMR025W SRL3P36167 246 aa1.19□□□□□ -2.22
CSI1YMR025W VMA22P38784 181 aa1.19□□□□□ -2.22
CSI1YMR025W HTD2P38790 280 aaKnown RBP1.19□□□□□ -2.22
CSI1YMR025W NSA2P40078 261 aaKnown RBP1.19□□□□□ -2.22
CSI1YMR025W POR2P40478 281 aa1.19□□□□□ -2.22
CSI1YMR025W LSM1P47017 172 aaKnown RBP1.19□□□□□ -2.22
CSI1YMR025W TDA4P47153 279 aa1.19□□□□□ -2.22
CSI1YMR025W TMA20P89886 181 aaPredicted RBP1.19□□□□□ -2.22
CSI1YMR025W SYM1Q06563 197 aa1.19□□□□□ -2.22
CSI1YMR025W YOL160WQ08321 113 aa1.19□□□□□ -2.22
CSI1YMR025W IRC23Q08416 157 aa1.19□□□□□ -2.22
CSI1YMR025W SUS1Q6WNK7 96 aa1.19□□□□□ -2.22
CSI1YMR025W YFR032C-BQ8TGU2 87 aa1.19□□□□□ -2.22
CSI1YMR025W PET20Q99373 253 aa1.19□□□□□ -2.22
CSI1YMR025W RRT1P38192 103 aa1.18□□□□□ -2.22
CSI1YMR025W CSH1P38287 376 aa1.18□□□□□ -2.22
CSI1YMR025W YBR219CP38317 127 aa1.18□□□□□ -2.22
CSI1YMR025W SVP26P38869 228 aa1.18□□□□□ -2.22
CSI1YMR025W HPA3P39979 161 aa1.18□□□□□ -2.22
CSI1YMR025W VTC1P40046 129 aaRIP-Chip data1.18□□□□□ -2.22not detected
CSI1YMR025W YER137CP40083 148 aaKnown RBP1.18□□□□□ -2.22
CSI1YMR025W RPL13BP40212 199 aaKnown RBP1.18□□□□□ -2.22
CSI1YMR025W GVP36P40531 326 aaKnown RBP1.18□□□□□ -2.22
CSI1YMR025W GAT4P40569 121 aa1.18□□□□□ -2.22
CSI1YMR025W GPI2P46961 280 aa1.18□□□□□ -2.22
CSI1YMR025W AIM25P47140 327 aa1.18□□□□□ -2.22
CSI1YMR025W ORM1P53224 222 aa1.18□□□□□ -2.22
CSI1YMR025W LSM7P53905 115 aaKnown RBP1.18□□□□□ -2.22
CSI1YMR025W SGF11Q03067 99 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms