RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W KRE1P17260 313 aa3.01□□□□□ -1.93
SOF1YLL011W HSP12P22943 109 aaKnown RBP3.01□□□□□ -1.93
SOF1YLL011W SFT1P43682 97 aa3.01□□□□□ -1.93
SOF1YLL011W RIM9Q04734 239 aa3.01□□□□□ -1.93
SOF1YLL011W KIN28P06242 306 aa3□□□□□ -1.93
SOF1YLL011W RPL14AP36105 138 aaKnown RBP3□□□□□ -1.93
SOF1YLL011W RPL14BP38754 138 aaKnown RBP3□□□□□ -1.93
SOF1YLL011W CIS3P47001 227 aa3□□□□□ -1.93
SOF1YLL011W YNR064CP53750 290 aa3□□□□□ -1.93
SOF1YLL011W APS2Q00381 147 aa3□□□□□ -1.93
SOF1YLL011W YPR114WQ06107 315 aa3□□□□□ -1.93
SOF1YLL011W ANT1Q06497 328 aa3□□□□□ -1.93
SOF1YLL011W YIL046W-AQ3E7Z4 54 aa3□□□□□ -1.93
SOF1YLL011W YNL217WP40152 326 aa2.99□□□□□ -1.93
SOF1YLL011W BOL2P53082 120 aa2.99□□□□□ -1.93
SOF1YLL011W YGR017WP53210 297 aa2.99□□□□□ -1.93
SOF1YLL011W LIP1Q03579 150 aa2.99□□□□□ -1.93
SOF1YLL011W YLR118CQ12354 227 aa2.99□□□□□ -1.93
SOF1YLL011W ATG40Q99325 256 aa2.99□□□□□ -1.93
SOF1YLL011W PRP8P33334 2413 aaKnown RBP2.99□□□□□ -1.93
SOF1YLL011W RPL26AP05743 127 aaKnown RBP2.98□□□□□ -1.93
SOF1YLL011W DDR48P18899 430 aaKnown RBP2.98□□□□□ -1.93
SOF1YLL011W YKR070WP36151 352 aaKnown RBP2.98□□□□□ -1.93
SOF1YLL011W YEL073CP39974 107 aa2.98□□□□□ -1.93
SOF1YLL011W YJR146WP47174 117 aa2.98□□□□□ -1.93
SOF1YLL011W RPL26BP53221 127 aaKnown RBP2.98□□□□□ -1.93
SOF1YLL011W RDS3Q06835 107 aaPredicted RBP2.98□□□□□ -1.93
SOF1YLL011W LDB18Q07887 179 aa2.98□□□□□ -1.93
SOF1YLL011W AGA2P32781 87 aa2.97□□□□□ -1.93
SOF1YLL011W GSP1P32835 219 aaKnown RBP2.97□□□□□ -1.93
SOF1YLL011W GSP2P32836 220 aaKnown RBP2.97□□□□□ -1.93
SOF1YLL011W TIR3P40552 269 aa2.97□□□□□ -1.93
SOF1YLL011W YOR381W-AQ3E804 55 aa2.97□□□□□ -1.93
SOF1YLL011W MRS4P23500 304 aa2.96□□□□□ -1.93
SOF1YLL011W EMC4P53073 190 aa2.96□□□□□ -1.93
SOF1YLL011W GEP7P53171 287 aa2.96□□□□□ -1.93
SOF1YLL011W AIM36Q03798 255 aa2.96□□□□□ -1.93
SOF1YLL011W YLR236CA0A023PZG4 107 aa2.96□□□□□ -1.94
SOF1YLL011W SOD1P00445 154 aaKnown RBP2.96□□□□□ -1.94
SOF1YLL011W RPL22AP05749 121 aaKnown RBP2.96□□□□□ -1.94
SOF1YLL011W YOL162WP0CF19 215 aa2.96□□□□□ -1.94
SOF1YLL011W GPA2P10823 449 aa2.96□□□□□ -1.94
SOF1YLL011W ERV15P38312 142 aa2.96□□□□□ -1.94
SOF1YLL011W AIM11P87275 137 aa2.96□□□□□ -1.94
SOF1YLL011W RRT7Q07829 113 aa2.96□□□□□ -1.94
SOF1YLL011W SAY1P53324 424 aa2.95□□□□□ -1.94
SOF1YLL011W BRR2P32639 2163 aaKnown RBP2.94□□□□□ -1.94
SOF1YLL011W YBR056W-AI2HB52 66 aa2.94□□□□□ -1.94
SOF1YLL011W NOP1P15646 327 aaKnown RBP2.94□□□□□ -1.94
SOF1YLL011W UTP11P34247 250 aaPredicted RBP2.94□□□□□ -1.94
SOF1YLL011W YPT31P38555 223 aaKnown RBP2.94□□□□□ -1.94
SOF1YLL011W RGI1P40043 161 aaPredicted RBP2.94□□□□□ -1.94
SOF1YLL011W ALB1P47019 175 aaPredicted RBP2.94□□□□□ -1.94
SOF1YLL011W ELC1Q03071 99 aa2.94□□□□□ -1.94
SOF1YLL011W PIR1Q03178 341 aa2.94□□□□□ -1.94
SOF1YLL011W RNH202Q05635 350 aa2.94□□□□□ -1.94
SOF1YLL011W ATG10Q07879 167 aa2.94□□□□□ -1.94
SOF1YLL011W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SOF1YLL011W DDI2P0CH63 225 aa2.93□□□□□ -1.94
SOF1YLL011W DDI3P0CH64 225 aa2.93□□□□□ -1.94
SOF1YLL011W MIG1P27705 504 aa2.93□□□□□ -1.94
SOF1YLL011W LHP1P33399 275 aaKnown RBP2.93□□□□□ -1.94
SOF1YLL011W TVP18Q04767 167 aa2.93□□□□□ -1.94
SOF1YLL011W YPR195CQ06594 109 aa2.93□□□□□ -1.94
SOF1YLL011W CSI2Q08054 341 aa2.93□□□□□ -1.94
SOF1YLL011W UIP4Q08926 304 aa2.93□□□□□ -1.94
SOF1YLL011W YPR013CQ12145 317 aa2.93□□□□□ -1.94
SOF1YLL011W MEC1P38111 2368 aa2.92□□□□□ -1.94
SOF1YLL011W POL2P21951 2222 aaKnown RBP2.92□□□□□ -1.94
SOF1YLL011W ADK1P07170 222 aaKnown RBP2.92□□□□□ -1.94
SOF1YLL011W MDH2P22133 377 aa2.92□□□□□ -1.94
SOF1YLL011W PEX4P29340 183 aa2.92□□□□□ -1.94
SOF1YLL011W YBL010CP32788 280 aa2.92□□□□□ -1.94
SOF1YLL011W PHS1P40857 217 aa2.92□□□□□ -1.94
SOF1YLL011W GRX5Q02784 150 aa2.92□□□□□ -1.94
SOF1YLL011W DML1Q03652 475 aa2.92□□□□□ -1.94
SOF1YLL011W UPS3Q04006 179 aa2.92□□□□□ -1.94
SOF1YLL011W CUE4Q04201 117 aaPredicted RBP2.92□□□□□ -1.94
SOF1YLL011W RAD28Q12021 506 aa2.92□□□□□ -1.94
SOF1YLL011W RPL43AP0CX25 92 aaKnown RBP2.91□□□□□ -1.94
SOF1YLL011W RPL43BP0CX26 92 aa2.91□□□□□ -1.94
SOF1YLL011W YBR209WP38311 105 aa2.91□□□□□ -1.94
SOF1YLL011W GAT4P40569 121 aa2.91□□□□□ -1.94
SOF1YLL011W PAC10P48363 199 aa2.91□□□□□ -1.94
SOF1YLL011W TMA23Q03525 211 aa2.91□□□□□ -1.94
SOF1YLL011W YOR015WQ12169 119 aa2.91□□□□□ -1.94
SOF1YLL011W RAS2P01120 322 aaKnown RBP2.9□□□□□ -1.94
SOF1YLL011W YCR101CP25607 182 aa2.9□□□□□ -1.94
SOF1YLL011W ETR1P38071 380 aa2.9□□□□□ -1.94
SOF1YLL011W SPG1P50088 95 aa2.9□□□□□ -1.94
SOF1YLL011W UPS1Q05776 175 aa2.9□□□□□ -1.94
SOF1YLL011W YOR289WQ12012 251 aaPredicted RBP2.9□□□□□ -1.94
SOF1YLL011W ATG41Q12048 136 aa2.9□□□□□ -1.94
SOF1YLL011W NMT1P14743 455 aa2.9□□□□□ -1.95
SOF1YLL011W YCR050CP25630 102 aa2.9□□□□□ -1.95
SOF1YLL011W SFT2P38166 215 aa2.9□□□□□ -1.95
SOF1YLL011W NSE4P43124 402 aa2.9□□□□□ -1.95
SOF1YLL011W YDL241WQ07738 123 aa2.9□□□□□ -1.95
SOF1YLL011W VPS68Q12016 184 aa2.9□□□□□ -1.95
SOF1YLL011W HUT1Q12520 339 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms