RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C COX16P47081 118 aa8.52□□□□□ -1.05
YKR040CYKR040C YDL183CP48569 320 aa8.52□□□□□ -1.05
YKR040CYKR040C SNO1Q03144 224 aa8.52□□□□□ -1.05
YKR040CYKR040C SMT3Q12306 101 aaKnown RBP8.52□□□□□ -1.05
YKR040CYKR040C RPL12AP0CX53 165 aaKnown RBP8.51□□□□□ -1.05
YKR040CYKR040C RPL12BP0CX54 165 aa8.51□□□□□ -1.05
YKR040CYKR040C TIR1P10863 254 aa8.51□□□□□ -1.05
YKR040CYKR040C BNS1P50084 137 aa8.51□□□□□ -1.05
YKR040CYKR040C UPS3Q04006 179 aa8.51□□□□□ -1.05
YKR040CYKR040C TIM22Q12328 207 aa8.51□□□□□ -1.05
YKR040CYKR040C YBR126W-AQ8TGU7 68 aa8.51□□□□□ -1.05
YKR040CYKR040C FMP49A0A023PZB3 126 aa8.5□□□□□ -1.05
YKR040CYKR040C DIA1P54005 336 aa8.5□□□□□ -1.05
YKR040CYKR040C YDR366CP87287 132 aa8.5□□□□□ -1.05
YKR040CYKR040C DCN1Q12395 269 aa8.5□□□□□ -1.05
YKR040CYKR040C TY1A-NL2Q12470 440 aa8.5□□□□□ -1.05
YKR040CYKR040C YCL001W-BQ96VH2 84 aa8.5□□□□□ -1.05
YKR040CYKR040C LAC1P28496 418 aa8.49□□□□□ -1.05
YKR040CYKR040C AGA1P32323 725 aa8.49□□□□□ -1.05
YKR040CYKR040C SRP14P38985 146 aa8.49□□□□□ -1.05
YKR040CYKR040C YIL024CP40543 189 aa8.49□□□□□ -1.05
YKR040CYKR040C RRT13P40042 185 aa8.48□□□□□ -1.05
YKR040CYKR040C PGD1P40356 397 aa8.48□□□□□ -1.05
YKR040CYKR040C TIM21P53220 239 aa8.48□□□□□ -1.05
YKR040CYKR040C RPL16BP26785 198 aaKnown RBP8.47□□□□□ -1.05
YKR040CYKR040C QRI5P32344 111 aa8.47□□□□□ -1.05
YKR040CYKR040C YCH1P42937 148 aa8.47□□□□□ -1.05
YKR040CYKR040C BRP1P53194 125 aa8.47□□□□□ -1.05
YKR040CYKR040C YBR200W-AQ3E755 54 aa8.47□□□□□ -1.05
YKR040CYKR040C MRPS9P38120 278 aa8.46□□□□□ -1.06
YKR040CYKR040C MOG1P47123 218 aa8.46□□□□□ -1.06
YKR040CYKR040C YPS5P53057 165 aa8.46□□□□□ -1.06
YKR040CYKR040C TY1A-DR4O74302 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-AP0CX57 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-PR1P0CX58 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-ORP0CX59 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-PR2P0CX60 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-DR5P0CX65 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-ER2P0CX66 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-GR3P0CX67 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-LR1P0CX68 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-MR2P0CX69 440 aa8.45□□□□□ -1.06
YKR040CYKR040C MRPL31P14063 131 aaPredicted RBP8.45□□□□□ -1.06
YKR040CYKR040C RPR2P40571 144 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-JR2P47099 440 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-DR1Q03856 440 aa8.45□□□□□ -1.06
YKR040CYKR040C GIM5Q04493 163 aa8.45□□□□□ -1.06
YKR040CYKR040C TY1A-ML1Q04706 440 aaKnown RBP8.45□□□□□ -1.06
YKR040CYKR040C TY1A-GR2Q12485 440 aa8.45□□□□□ -1.06
YKR040CYKR040C YPR053CQ6Q5F3 151 aa8.45□□□□□ -1.06
YKR040CYKR040C NTF2P33331 125 aaKnown RBP8.44□□□□□ -1.06
YKR040CYKR040C YGR026WP53217 278 aa8.44□□□□□ -1.06
YKR040CYKR040C ORM2Q06144 216 aa8.44□□□□□ -1.06
YKR040CYKR040C CSM4Q08955 156 aa8.44□□□□□ -1.06
YKR040CYKR040C ADH3P07246 375 aaKnown RBP8.43□□□□□ -1.06
YKR040CYKR040C HSP10P38910 106 aa8.43□□□□□ -1.06
YKR040CYKR040C AIM34Q03673 198 aa8.43□□□□□ -1.06
YKR040CYKR040C YGR240C-AQ3E786 66 aa8.43□□□□□ -1.06
YKR040CYKR040C RPB11P38902 120 aa8.42□□□□□ -1.06
YKR040CYKR040C YGR017WP53210 297 aa8.42□□□□□ -1.06
YKR040CYKR040C MRPL28P36527 147 aa8.41□□□□□ -1.06
YKR040CYKR040C YGL010WP25338 174 aa8.4□□□□□ -1.06
YKR040CYKR040C YGL015CP33199 130 aa8.4□□□□□ -1.06
YKR040CYKR040C YHR140WP38842 239 aa8.4□□□□□ -1.06
YKR040CYKR040C CUP2P15315 225 aa8.39□□□□□ -1.07
YKR040CYKR040C ELF1P36053 145 aa8.39□□□□□ -1.07
YKR040CYKR040C SUR2P38992 349 aa8.39□□□□□ -1.07
YKR040CYKR040C YNL217WP40152 326 aa8.39□□□□□ -1.07
YKR040CYKR040C APS2Q00381 147 aa8.39□□□□□ -1.07
YKR040CYKR040C ATG33Q06485 197 aa8.39□□□□□ -1.07
YKR040CYKR040C HMRA1P0CY11 126 aa8.38□□□□□ -1.07
YKR040CYKR040C NHP6AP11632 93 aaKnown RBP8.38□□□□□ -1.07
YKR040CYKR040C MIX23P38162 196 aa8.38□□□□□ -1.07
YKR040CYKR040C SIT1P39980 628 aa8.38□□□□□ -1.07
YKR040CYKR040C RPL27AP0C2H6 136 aaKnown RBP8.37□□□□□ -1.07
YKR040CYKR040C KRE9P39005 276 aa8.37□□□□□ -1.07
YKR040CYKR040C THG1P53215 237 aaKnown RBP8.37□□□□□ -1.07
YKR040CYKR040C DXO1Q06349 442 aa8.37□□□□□ -1.07
YKR040CYKR040C YLR042CQ07990 161 aa8.37□□□□□ -1.07
YKR040CYKR040C CRC1Q12289 327 aa8.37□□□□□ -1.07
YKR040CYKR040C YLR118CQ12354 227 aa8.37□□□□□ -1.07
YKR040CYKR040C YNR034W-AQ3E841 98 aa8.37□□□□□ -1.07
YKR040CYKR040C FRS1P15624 595 aaKnown RBP8.36□□□□□ -1.07
YKR040CYKR040C VMA21P41806 77 aa8.36□□□□□ -1.07
YKR040CYKR040C ATP23P53722 227 aa8.36□□□□□ -1.07
YKR040CYKR040C GPI19Q04082 140 aa8.36□□□□□ -1.07
YKR040CYKR040C YOP1Q12402 180 aa8.36□□□□□ -1.07
YKR040CYKR040C PAU7P39545 55 aa8.35□□□□□ -1.07
YKR040CYKR040C PAU5P43575 122 aa8.35□□□□□ -1.07
YKR040CYKR040C MGA1P53050 456 aa8.35□□□□□ -1.07
YKR040CYKR040C YCR023CP25351 611 aa8.34□□□□□ -1.07
YKR040CYKR040C PAM17P36147 197 aa8.34□□□□□ -1.07
YKR040CYKR040C DAD2P36162 133 aa8.34□□□□□ -1.07
YKR040CYKR040C ATG8P38182 117 aaRIP-Chip data8.34□□□□□ -1.07not detected
YKR040CYKR040C IRC22P40006 225 aa8.34□□□□□ -1.07
YKR040CYKR040C ARC18Q05933 178 aaKnown RBP8.34□□□□□ -1.07
YKR040CYKR040C TY1A-LR4P0C2I8 440 aaKnown RBP8.33□□□□□ -1.08
YKR040CYKR040C TY1A-DR6P0CX70 440 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-ER1P0CX71 440 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-LR2P0CX72 440 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms