RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C RNA15P25299 296 aaPredicted RBP2.3□□□□□ -2.04
ATG27YJL178C YGL010WP25338 174 aa2.3□□□□□ -2.04
ATG27YJL178C SSS1P35179 80 aa2.3□□□□□ -2.04
ATG27YJL178C PAM17P36147 197 aa2.3□□□□□ -2.04
ATG27YJL178C LSM2P38203 95 aaKnown RBP2.3□□□□□ -2.04
ATG27YJL178C YPT31P38555 223 aaKnown RBP2.3□□□□□ -2.04
ATG27YJL178C LST8P41318 303 aa2.3□□□□□ -2.04
ATG27YJL178C PAU5P43575 122 aa2.3□□□□□ -2.04
ATG27YJL178C MIC27P50945 234 aa2.3□□□□□ -2.04
ATG27YJL178C TOM7P53507 60 aa2.3□□□□□ -2.04
ATG27YJL178C YNL046WP53956 172 aa2.3□□□□□ -2.04
ATG27YJL178C CYT2Q00873 224 aa2.3□□□□□ -2.04
ATG27YJL178C MIX17Q03667 156 aa2.3□□□□□ -2.04
ATG27YJL178C RAV2Q03956 351 aa2.3□□□□□ -2.04
ATG27YJL178C GCN1P33892 2672 aaKnown RBP2.3□□□□□ -2.04
ATG27YJL178C PRP8P33334 2413 aaKnown RBP2.29□□□□□ -2.04
ATG27YJL178C FMP49A0A023PZB3 126 aa2.29□□□□□ -2.04
ATG27YJL178C POR1P04840 283 aaKnown RBP2.29□□□□□ -2.04
ATG27YJL178C PAU19P0CE85 124 aa2.29□□□□□ -2.04
ATG27YJL178C PAU21P0CE86 164 aa2.29□□□□□ -2.04
ATG27YJL178C PAU22P0CE87 164 aa2.29□□□□□ -2.04
ATG27YJL178C TOM40P23644 387 aaKnown RBP2.29□□□□□ -2.04
ATG27YJL178C PAU3P25610 124 aa2.29□□□□□ -2.04
ATG27YJL178C SRP21P32342 167 aa2.29□□□□□ -2.04
ATG27YJL178C FZF1P32805 299 aa2.29□□□□□ -2.04
ATG27YJL178C KTI12P34253 313 aaKnown RBP2.29□□□□□ -2.04
ATG27YJL178C CSH1P38287 376 aa2.29□□□□□ -2.04
ATG27YJL178C DOG2P38773 246 aa2.29□□□□□ -2.04
ATG27YJL178C DOG1P38774 246 aa2.29□□□□□ -2.04
ATG27YJL178C YAR068WP39564 161 aa2.29□□□□□ -2.04
ATG27YJL178C BDH1P39714 382 aa2.29□□□□□ -2.04
ATG27YJL178C GLE2P40066 365 aa2.29□□□□□ -2.04
ATG27YJL178C GPI2P46961 280 aa2.29□□□□□ -2.04
ATG27YJL178C CPD1P53314 239 aa2.29□□□□□ -2.04
ATG27YJL178C YNR064CP53750 290 aa2.29□□□□□ -2.04
ATG27YJL178C ATC1Q04005 294 aa2.29□□□□□ -2.04
ATG27YJL178C ARR2Q06597 130 aa2.29□□□□□ -2.04
ATG27YJL178C FIT2Q08906 153 aa2.29□□□□□ -2.04
ATG27YJL178C PAA1Q12447 191 aaKnown RBP2.29□□□□□ -2.04
ATG27YJL178C CDC7P06243 507 aa2.28□□□□□ -2.04
ATG27YJL178C RPS22AP0C0W1 130 aaKnown RBP2.28□□□□□ -2.04
ATG27YJL178C CUP2P15315 225 aa2.28□□□□□ -2.04
ATG27YJL178C RPB9P27999 122 aa2.28□□□□□ -2.04
ATG27YJL178C YPS1P32329 569 aa2.28□□□□□ -2.04
ATG27YJL178C PET8P38921 284 aa2.28□□□□□ -2.04
ATG27YJL178C SNU13P39990 126 aaKnown RBP2.28□□□□□ -2.04
ATG27YJL178C YIL012WP40551 113 aa2.28□□□□□ -2.04
ATG27YJL178C YGR025WP53216 100 aa2.28□□□□□ -2.04
ATG27YJL178C CUE4Q04201 117 aaPredicted RBP2.28□□□□□ -2.04
ATG27YJL178C ECM19Q06011 112 aa2.28□□□□□ -2.04
ATG27YJL178C YPR063CQ12160 140 aa2.28□□□□□ -2.04
ATG27YJL178C YNR034W-AQ3E841 98 aa2.28□□□□□ -2.04
ATG27YJL178C YIL134C-AQ45U18 67 aa2.28□□□□□ -2.04
ATG27YJL178C YCL001W-BQ96VH2 84 aa2.28□□□□□ -2.04
ATG27YJL178C TEL1P38110 2787 aa2.28□□□□□ -2.04
ATG27YJL178C YHR213WP0CI67 198 aa2.27□□□□□ -2.05
ATG27YJL178C VMA11P32842 164 aa2.27□□□□□ -2.05
ATG27YJL178C SFT2P38166 215 aa2.27□□□□□ -2.05
ATG27YJL178C YBL071CP38185 102 aa2.27□□□□□ -2.05
ATG27YJL178C HSP10P38910 106 aa2.27□□□□□ -2.05
ATG27YJL178C LSM4P40070 187 aaKnown RBP2.27□□□□□ -2.05
ATG27YJL178C YMR141CP40211 102 aa2.27□□□□□ -2.05
ATG27YJL178C OST3P48439 350 aa2.27□□□□□ -2.05
ATG27YJL178C SDS23P53172 527 aa2.27□□□□□ -2.05
ATG27YJL178C PBP4Q07362 185 aaKnown RBP2.27□□□□□ -2.05
ATG27YJL178C CSI2Q08054 341 aa2.27□□□□□ -2.05
ATG27YJL178C SMT3Q12306 101 aaKnown RBP2.27□□□□□ -2.05
ATG27YJL178C DCN1Q12395 269 aa2.27□□□□□ -2.05
ATG27YJL178C DFM1Q12743 341 aaKnown RBP2.27□□□□□ -2.05
ATG27YJL178C URA2P07259 2214 aaKnown RBP2.27□□□□□ -2.05
ATG27YJL178C MEC1P38111 2368 aa2.27□□□□□ -2.05
ATG27YJL178C MRPL20P22354 195 aaPredicted RBP2.26□□□□□ -2.05
ATG27YJL178C HSP12P22943 109 aaKnown RBP2.26□□□□□ -2.05
ATG27YJL178C MIG1P27705 504 aa2.26□□□□□ -2.05
ATG27YJL178C SUA7P29055 345 aaPredicted RBP2.26□□□□□ -2.05
ATG27YJL178C QRI5P32344 111 aa2.26□□□□□ -2.05
ATG27YJL178C SCM4P32564 187 aa2.26□□□□□ -2.05
ATG27YJL178C YHR173CP38864 112 aa2.26□□□□□ -2.05
ATG27YJL178C SUR2P38992 349 aa2.26□□□□□ -2.05
ATG27YJL178C YER134CP40081 178 aa2.26□□□□□ -2.05
ATG27YJL178C CYB5P40312 120 aa2.26□□□□□ -2.05
ATG27YJL178C YIR020CP40575 100 aa2.26□□□□□ -2.05
ATG27YJL178C IMP2P46972 177 aa2.26□□□□□ -2.05
ATG27YJL178C YJL028WP47062 111 aa2.26□□□□□ -2.05
ATG27YJL178C YJL027CP47063 138 aaPredicted RBP2.26□□□□□ -2.05
ATG27YJL178C LSM8P47093 109 aaKnown RBP2.26□□□□□ -2.05
ATG27YJL178C SSU72P53538 206 aaPredicted RBP2.26□□□□□ -2.05
ATG27YJL178C APS2Q00381 147 aa2.26□□□□□ -2.05
ATG27YJL178C YOR105WQ08504 108 aa2.26□□□□□ -2.05
ATG27YJL178C SEC4P07560 215 aaKnown RBP2.25□□□□□ -2.05
ATG27YJL178C CPT1P17898 393 aa2.25□□□□□ -2.05
ATG27YJL178C FPR2P32472 135 aa2.25□□□□□ -2.05
ATG27YJL178C MRPL38P35996 138 aaPredicted RBP2.25□□□□□ -2.05
ATG27YJL178C CDC40P40968 455 aaPredicted RBP2.25□□□□□ -2.05
ATG27YJL178C SBH2P52871 88 aa2.25□□□□□ -2.05
ATG27YJL178C ERV14P53173 138 aa2.25□□□□□ -2.05
ATG27YJL178C CGR1P53188 120 aa2.25□□□□□ -2.05
ATG27YJL178C SWT21P53873 357 aaPredicted RBP2.25□□□□□ -2.05
ATG27YJL178C SMD1Q02260 146 aaPredicted RBP2.25□□□□□ -2.05
ATG27YJL178C PKR1Q03880 122 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms