RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C FIT2Q08906 153 aa2.56□□□□□ -2
SGN1YIR001C MRS1P07266 363 aa2.55□□□□□ -2
SGN1YIR001C YDR034C-AP0C289 58 aa2.55□□□□□ -2
SGN1YIR001C RPL31BP0C2H9 113 aaKnown RBP2.55□□□□□ -2
SGN1YIR001C SPO13P23624 291 aa2.55□□□□□ -2
SGN1YIR001C MRPL28P36527 147 aa2.55□□□□□ -2
SGN1YIR001C YNL217WP40152 326 aa2.55□□□□□ -2
SGN1YIR001C RIB4P50861 169 aaPredicted RBP2.55□□□□□ -2
SGN1YIR001C YDR366CP87287 132 aa2.55□□□□□ -2
SGN1YIR001C AVO2Q04749 426 aa2.55□□□□□ -2
SGN1YIR001C TAL1P15019 335 aaKnown RBP2.54□□□□□ -2
SGN1YIR001C KTI12P34253 313 aaKnown RBP2.54□□□□□ -2
SGN1YIR001C HUA1P40325 198 aa2.54□□□□□ -2
SGN1YIR001C EMC5P40540 141 aa2.54□□□□□ -2
SGN1YIR001C YJR111CP47148 283 aaKnown RBP2.54□□□□□ -2
SGN1YIR001C DSK2P48510 373 aa2.54□□□□□ -2
SGN1YIR001C MGA1P53050 456 aa2.54□□□□□ -2
SGN1YIR001C MRPL50P53724 139 aa2.54□□□□□ -2
SGN1YIR001C YNR066CP53752 436 aa2.54□□□□□ -2
SGN1YIR001C DPP1Q05521 289 aa2.54□□□□□ -2
SGN1YIR001C DFM1Q12743 341 aaKnown RBP2.54□□□□□ -2
SGN1YIR001C RRT15Q3E811 62 aa2.54□□□□□ -2
SGN1YIR001C YLL066W-BQ8TGJ7 56 aa2.54□□□□□ -2
SGN1YIR001C YPL229WQ99395 206 aa2.54□□□□□ -2
SGN1YIR001C RPL16BP26785 198 aaKnown RBP2.53□□□□□ -2
SGN1YIR001C AHT1P29589 182 aa2.53□□□□□ -2
SGN1YIR001C TRS20P38334 175 aa2.53□□□□□ -2
SGN1YIR001C YHR173CP38864 112 aa2.53□□□□□ -2
SGN1YIR001C KRE9P39005 276 aa2.53□□□□□ -2
SGN1YIR001C SPI1P40092 148 aa2.53□□□□□ -2
SGN1YIR001C BRP1P53194 125 aa2.53□□□□□ -2
SGN1YIR001C CAF40P53829 373 aa2.53□□□□□ -2
SGN1YIR001C DIA1P54005 336 aa2.53□□□□□ -2
SGN1YIR001C DAD4P69851 72 aa2.53□□□□□ -2
SGN1YIR001C MRPS16Q02608 121 aa2.53□□□□□ -2
SGN1YIR001C RPL33AP05744 107 aaKnown RBP2.52□□□□□ -2.01
SGN1YIR001C RNA15P25299 296 aaPredicted RBP2.52□□□□□ -2.01
SGN1YIR001C ACB1P31787 87 aa2.52□□□□□ -2.01
SGN1YIR001C AGA1P32323 725 aa2.52□□□□□ -2.01
SGN1YIR001C YBR013CP38215 129 aa2.52□□□□□ -2.01
SGN1YIR001C YMR141CP40211 102 aa2.52□□□□□ -2.01
SGN1YIR001C RPL33BP41056 107 aaKnown RBP2.52□□□□□ -2.01
SGN1YIR001C AIM34Q03673 198 aa2.52□□□□□ -2.01
SGN1YIR001C FCF1Q05498 189 aaPredicted RBP2.52□□□□□ -2.01
SGN1YIR001C SDO1Q07953 250 aaKnown RBP2.52□□□□□ -2.01
SGN1YIR001C DAD1Q12248 94 aa2.52□□□□□ -2.01
SGN1YIR001C YAR023CD6VPM8 179 aa2.51□□□□□ -2.01
SGN1YIR001C MAG1P22134 296 aaKnown RBP2.51□□□□□ -2.01
SGN1YIR001C HMX1P32339 317 aa2.51□□□□□ -2.01
SGN1YIR001C AME1P38313 324 aa2.51□□□□□ -2.01
SGN1YIR001C YBR292CP38357 123 aa2.51□□□□□ -2.01
SGN1YIR001C SUR2P38992 349 aa2.51□□□□□ -2.01
SGN1YIR001C UIP3P39547 235 aa2.51□□□□□ -2.01
SGN1YIR001C POG1P40473 351 aa2.51□□□□□ -2.01
SGN1YIR001C COX16P47081 118 aa2.51□□□□□ -2.01
SGN1YIR001C YGR017WP53210 297 aa2.51□□□□□ -2.01
SGN1YIR001C ERI1P62651 68 aaKnown RBP2.51□□□□□ -2.01
SGN1YIR001C RAV2Q03956 351 aa2.51□□□□□ -2.01
SGN1YIR001C YLR042CQ07990 161 aa2.51□□□□□ -2.01
SGN1YIR001C DGA1Q08650 418 aa2.51□□□□□ -2.01
SGN1YIR001C TIM22Q12328 207 aa2.51□□□□□ -2.01
SGN1YIR001C UTP23Q12339 254 aaKnown RBP2.51□□□□□ -2.01
SGN1YIR001C YBR200W-AQ3E755 54 aa2.51□□□□□ -2.01
SGN1YIR001C YLR342W-AQ3E810 57 aa2.51□□□□□ -2.01
SGN1YIR001C PCC1Q3E833 88 aa2.51□□□□□ -2.01
SGN1YIR001C RPS0AP32905 252 aaKnown RBP2.5□□□□□ -2.01
SGN1YIR001C TEM1P38987 245 aa2.5□□□□□ -2.01
SGN1YIR001C SRB7P47822 140 aa2.5□□□□□ -2.01
SGN1YIR001C YCL001W-AP87012 153 aa2.5□□□□□ -2.01
SGN1YIR001C PMP3P87284 55 aa2.5□□□□□ -2.01
SGN1YIR001C MRPS17Q03246 237 aaPredicted RBP2.5□□□□□ -2.01
SGN1YIR001C YOR015WQ12169 119 aa2.5□□□□□ -2.01
SGN1YIR001C YPR010C-AA5Z2X5 72 aa2.49□□□□□ -2.01
SGN1YIR001C CKS1P20486 150 aaKnown RBP2.49□□□□□ -2.01
SGN1YIR001C SAR1P20606 190 aaKnown RBP2.49□□□□□ -2.01
SGN1YIR001C POF1P25576 258 aa2.49□□□□□ -2.01
SGN1YIR001C RPL14AP36105 138 aaKnown RBP2.49□□□□□ -2.01
SGN1YIR001C MIX23P38162 196 aa2.49□□□□□ -2.01
SGN1YIR001C RPL14BP38754 138 aaKnown RBP2.49□□□□□ -2.01
SGN1YIR001C TAD2P47058 250 aa2.49□□□□□ -2.01
SGN1YIR001C TIM21P53220 239 aa2.49□□□□□ -2.01
SGN1YIR001C LCL1Q02786 101 aa2.49□□□□□ -2.01
SGN1YIR001C BET5Q03630 159 aa2.49□□□□□ -2.01
SGN1YIR001C UPS3Q04006 179 aa2.49□□□□□ -2.01
SGN1YIR001C SME1Q12330 94 aaPredicted RBP2.49□□□□□ -2.01
SGN1YIR001C YMR230W-AQ3E7B5 62 aa2.49□□□□□ -2.01
SGN1YIR001C UBI4P0CG63 381 aaKnown RBP2.48□□□□□ -2.01
SGN1YIR001C RPL12AP0CX53 165 aaKnown RBP2.48□□□□□ -2.01
SGN1YIR001C RPL12BP0CX54 165 aa2.48□□□□□ -2.01
SGN1YIR001C YCR023CP25351 611 aa2.48□□□□□ -2.01
SGN1YIR001C SMD3P43321 101 aaKnown RBP2.48□□□□□ -2.01
SGN1YIR001C LOC1P43586 204 aaPredicted RBP2.48□□□□□ -2.01
SGN1YIR001C YGL185CP53100 379 aa2.48□□□□□ -2.01
SGN1YIR001C ADD37Q03233 198 aa2.48□□□□□ -2.01
SGN1YIR001C YDR115WQ04598 105 aa2.48□□□□□ -2.01
SGN1YIR001C YMR320WQ04897 101 aa2.48□□□□□ -2.01
SGN1YIR001C ANT1Q06497 328 aa2.48□□□□□ -2.01
SGN1YIR001C YBR085C-AO43137 85 aa2.47□□□□□ -2.01
SGN1YIR001C YOR105WQ08504 108 aa2.47□□□□□ -2.01
SGN1YIR001C PPT2Q12036 173 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms