RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RPL15BP54780 204 aaPredicted RBP8.83□□□□□ -1
SIM1YIL123W YOL160WQ08321 113 aa8.83□□□□□ -1
SIM1YIL123W YLR342W-AQ3E810 57 aa8.83□□□□□ -1
SIM1YIL123W TDA4P47153 279 aa8.82□□□□□ -1
SIM1YIL123W YDR215CQ12240 137 aa8.82□□□□□ -1
SIM1YIL123W PAU7P39545 55 aa8.81□□□□□ -1
SIM1YIL123W RPA43P46669 326 aa8.81□□□□□ -1
SIM1YIL123W YMR181CQ03231 154 aa8.81□□□□□ -1
SIM1YIL123W HOR7Q05827 59 aa8.81□□□□□ -1
SIM1YIL123W POM33Q12164 279 aa8.81□□□□□ -1
SIM1YIL123W ERG27Q12452 347 aaKnown RBP8.81□□□□□ -1
SIM1YIL123W MDM10P18409 493 aa8.8□□□□□ -1
SIM1YIL123W MRPL11P36521 249 aaPredicted RBP8.8□□□□□ -1
SIM1YIL123W YPI1P43587 155 aa8.8□□□□□ -1
SIM1YIL123W LCB3P47013 409 aa8.8□□□□□ -1
SIM1YIL123W TOS8P53147 276 aa8.8□□□□□ -1
SIM1YIL123W DUG3P53871 357 aa8.8□□□□□ -1
SIM1YIL123W GEP3Q08622 556 aa8.8□□□□□ -1
SIM1YIL123W SEC4P07560 215 aaKnown RBP8.8□□□□□ -1
SIM1YIL123W ZRT1P32804 376 aa8.8□□□□□ -1
SIM1YIL123W SDS23P53172 527 aa8.8□□□□□ -1
SIM1YIL123W UPS3Q04006 179 aa8.8□□□□□ -1
SIM1YIL123W CSM4Q08955 156 aa8.8□□□□□ -1
SIM1YIL123W LSO2Q3E772 92 aaKnown RBP8.8□□□□□ -1
SIM1YIL123W RPL23AP0CX41 137 aaKnown RBP8.79□□□□□ -1
SIM1YIL123W RPL23BP0CX42 137 aaKnown RBP8.79□□□□□ -1
SIM1YIL123W RPL12AP0CX53 165 aaKnown RBP8.79□□□□□ -1
SIM1YIL123W RPL12BP0CX54 165 aa8.79□□□□□ -1
SIM1YIL123W CMC1P36064 111 aa8.79□□□□□ -1
SIM1YIL123W ARC18Q05933 178 aaKnown RBP8.79□□□□□ -1
SIM1YIL123W YER188WP40103 239 aa8.78□□□□□ -1
SIM1YIL123W FSF1Q12029 327 aaKnown RBP8.78□□□□□ -1
SIM1YIL123W CPT1P17898 393 aa8.77□□□□□ -1.01
SIM1YIL123W SPI1P40092 148 aa8.77□□□□□ -1.01
SIM1YIL123W ATG39Q06159 398 aa8.77□□□□□ -1.01
SIM1YIL123W YKL102CP34249 101 aa8.76□□□□□ -1.01
SIM1YIL123W YER134CP40081 178 aa8.76□□□□□ -1.01
SIM1YIL123W CDC40P40968 455 aaPredicted RBP8.76□□□□□ -1.01
SIM1YIL123W YGL118CP53132 145 aa8.76□□□□□ -1.01
SIM1YIL123W FUN14P18411 198 aa8.75□□□□□ -1.01
SIM1YIL123W VMA16P23968 213 aa8.75□□□□□ -1.01
SIM1YIL123W SCM4P32564 187 aa8.75□□□□□ -1.01
SIM1YIL123W GSP1P32835 219 aaKnown RBP8.75□□□□□ -1.01
SIM1YIL123W GSP2P32836 220 aaKnown RBP8.75□□□□□ -1.01
SIM1YIL123W TEM1P38987 245 aa8.75□□□□□ -1.01
SIM1YIL123W THG1P53215 237 aaKnown RBP8.75□□□□□ -1.01
SIM1YIL123W YPR013CQ12145 317 aa8.75□□□□□ -1.01
SIM1YIL123W YCR041WP37265 110 aa8.74□□□□□ -1.01
SIM1YIL123W COX16P47081 118 aa8.74□□□□□ -1.01
SIM1YIL123W BRP1P53194 125 aa8.74□□□□□ -1.01
SIM1YIL123W RPL27AP0C2H6 136 aaKnown RBP8.73□□□□□ -1.01
SIM1YIL123W SEC72P39742 193 aaKnown RBP8.73□□□□□ -1.01
SIM1YIL123W PRE5P40302 234 aaKnown RBP8.73□□□□□ -1.01
SIM1YIL123W YGR025WP53216 100 aa8.73□□□□□ -1.01
SIM1YIL123W GTO3Q04806 366 aa8.73□□□□□ -1.01
SIM1YIL123W IZH3Q07959 543 aa8.73□□□□□ -1.01
SIM1YIL123W WIP1Q2V2P8 89 aa8.73□□□□□ -1.01
SIM1YIL123W MRPL44P19956 98 aa8.72□□□□□ -1.01
SIM1YIL123W PAU16P35994 123 aa8.72□□□□□ -1.01
SIM1YIL123W PRM3Q08931 133 aa8.72□□□□□ -1.01
SIM1YIL123W TIM22Q12328 207 aa8.72□□□□□ -1.01
SIM1YIL123W YJL028WP47062 111 aa8.71□□□□□ -1.01
SIM1YIL123W GPI19Q04082 140 aa8.71□□□□□ -1.01
SIM1YIL123W MRPL23Q12487 163 aaPredicted RBP8.71□□□□□ -1.01
SIM1YIL123W YNL146C-AQ3E7Z1 64 aa8.71□□□□□ -1.02
SIM1YIL123W YCL042WP25572 119 aa8.7□□□□□ -1.02
SIM1YIL123W YHR140WP38842 239 aa8.7□□□□□ -1.02
SIM1YIL123W YNL200CP40165 246 aaKnown RBP8.7□□□□□ -1.02
SIM1YIL123W CAX4P53223 239 aa8.7□□□□□ -1.02
SIM1YIL123W YIP3P53633 176 aa8.7□□□□□ -1.02
SIM1YIL123W CCW12Q12127 133 aa8.7□□□□□ -1.02
SIM1YIL123W FYV7Q12247 151 aa8.7□□□□□ -1.02
SIM1YIL123W CCW14O13547 238 aa8.69□□□□□ -1.02
SIM1YIL123W MST28P39552 234 aa8.69□□□□□ -1.02
SIM1YIL123W MST27P53176 234 aa8.69□□□□□ -1.02
SIM1YIL123W CNL1Q06333 122 aa8.69□□□□□ -1.02
SIM1YIL123W YPL162CQ12042 273 aa8.69□□□□□ -1.02
SIM1YIL123W NUM1Q00402 2748 aa8.68□□□□□ -1.02
SIM1YIL123W YHR022CP38763 256 aa8.68□□□□□ -1.02
SIM1YIL123W MRPL49P40858 161 aaPredicted RBP8.68□□□□□ -1.02
SIM1YIL123W FIP1P45976 327 aa8.68□□□□□ -1.02
SIM1YIL123W YJR096WP47137 282 aa8.68□□□□□ -1.02
SIM1YIL123W YGR017WP53210 297 aa8.68□□□□□ -1.02
SIM1YIL123W PRM7Q12459 698 aa8.68□□□□□ -1.02
SIM1YIL123W TPT1Q12272 230 aaKnown RBP8.67□□□□□ -1.02
SIM1YIL123W YOR011W-AQ3E807 68 aa8.67□□□□□ -1.02
SIM1YIL123W DIA1P54005 336 aa8.66□□□□□ -1.02
SIM1YIL123W RRG8Q06109 277 aa8.66□□□□□ -1.02
SIM1YIL123W YKR032WP36127 104 aa8.65□□□□□ -1.02
SIM1YIL123W PET8P38921 284 aa8.64□□□□□ -1.03
SIM1YIL123W YFL068WP0CX99 160 aa8.63□□□□□ -1.03
SIM1YIL123W YLL066W-AP0CY00 160 aa8.63□□□□□ -1.03
SIM1YIL123W YLL067W-AP0CY01 160 aa8.63□□□□□ -1.03
SIM1YIL123W AGA1P32323 725 aa8.63□□□□□ -1.03
SIM1YIL123W YDL085C-AQ3E7B7 68 aaKnown RBP8.63□□□□□ -1.03
SIM1YIL123W YIL014C-AQ02598 104 aa8.63□□□□□ -1.03
SIM1YIL123W HTL1Q9URQ5 78 aa8.63□□□□□ -1.03
SIM1YIL123W VAR1P02381 398 aa8.62□□□□□ -1.03
SIM1YIL123W ATP5P09457 212 aa8.62□□□□□ -1.03
SIM1YIL123W YER135CP40082 130 aa8.62□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms