RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W YHP1Q04116 353 aa4.03□□□□□ -1.76
PDE1YGL248W NRG2P38082 220 aa4.02□□□□□ -1.77
PDE1YGL248W ECO1P43605 281 aa4.02□□□□□ -1.77
PDE1YGL248W PBA1Q05778 276 aa4.02□□□□□ -1.77
PDE1YGL248W SRL1Q08673 210 aa4.02□□□□□ -1.77
PDE1YGL248W YOR381W-AQ3E804 55 aa4.02□□□□□ -1.77
PDE1YGL248W TY3B-IQ7LHG5 1498 aaKnown RBP4.02□□□□□ -1.77
PDE1YGL248W YCF1P39109 1515 aaKnown RBP4.01□□□□□ -1.77
PDE1YGL248W MLP2P40457 1679 aa4.01□□□□□ -1.77
PDE1YGL248W YOL162WP0CF19 215 aa4.01□□□□□ -1.77
PDE1YGL248W YCR043CP25361 127 aa4.01□□□□□ -1.77
PDE1YGL248W RPB9P27999 122 aa4.01□□□□□ -1.77
PDE1YGL248W YBR013CP38215 129 aa4.01□□□□□ -1.77
PDE1YGL248W YHL018WP38744 120 aaPredicted RBP4.01□□□□□ -1.77
PDE1YGL248W RRT13P40042 185 aa4.01□□□□□ -1.77
PDE1YGL248W HUR1P45820 110 aa4.01□□□□□ -1.77
PDE1YGL248W RSM19P53733 91 aaPredicted RBP4.01□□□□□ -1.77
PDE1YGL248W UPS3Q04006 179 aa4.01□□□□□ -1.77
PDE1YGL248W MIX14Q04341 121 aa4.01□□□□□ -1.77
PDE1YGL248W SEN15Q04675 128 aa4.01□□□□□ -1.77
PDE1YGL248W ELP6Q04868 273 aa4.01□□□□□ -1.77
PDE1YGL248W HRT1Q08273 121 aa4.01□□□□□ -1.77
PDE1YGL248W ATG40Q99325 256 aa4.01□□□□□ -1.77
PDE1YGL248W PEP1P32319 1579 aa4.01□□□□□ -1.77
PDE1YGL248W PDR15Q04182 1529 aaKnown RBP4□□□□□ -1.77
PDE1YGL248W TY1B-DR1Q03855 1755 aa4□□□□□ -1.77
PDE1YGL248W TY1B-BRQ12193 1756 aa4□□□□□ -1.77
PDE1YGL248W TY1B-DR3Q99231 1755 aa4□□□□□ -1.77
PDE1YGL248W YFR010W-AP0C5N0 62 aa4□□□□□ -1.77
PDE1YGL248W FUN14P18411 198 aa4□□□□□ -1.77
PDE1YGL248W MIG3P39943 394 aa4□□□□□ -1.77
PDE1YGL248W VMA21P41806 77 aa4□□□□□ -1.77
PDE1YGL248W CWP2P43497 92 aa4□□□□□ -1.77
PDE1YGL248W MPC3P53311 146 aa4□□□□□ -1.77
PDE1YGL248W SOM1Q05676 74 aa4□□□□□ -1.77
PDE1YGL248W PIN3Q06449 215 aa4□□□□□ -1.77
PDE1YGL248W YCL021W-AQ96VH3 125 aa4□□□□□ -1.77
PDE1YGL248W KOG1P38873 1557 aa4□□□□□ -1.77
PDE1YGL248W PAI3P01094 68 aa3.99□□□□□ -1.77
PDE1YGL248W PEP8P40335 379 aa3.99□□□□□ -1.77
PDE1YGL248W YFL065CP43539 102 aa3.99□□□□□ -1.77
PDE1YGL248W MZM1Q03429 123 aaPredicted RBP3.99□□□□□ -1.77
PDE1YGL248W YPR203WQ08994 102 aa3.99□□□□□ -1.77
PDE1YGL248W YER078W-AQ3E7A2 54 aa3.99□□□□□ -1.77
PDE1YGL248W YAL067W-AQ8TGK6 75 aa3.99□□□□□ -1.77
PDE1YGL248W FYV5P25585 152 aa3.98□□□□□ -1.77
PDE1YGL248W YLR296WQ05898 108 aa3.98□□□□□ -1.77
PDE1YGL248W SUS1Q6WNK7 96 aa3.98□□□□□ -1.77
PDE1YGL248W UBR1P19812 1950 aa3.97□□□□□ -1.77
PDE1YGL248W ULS1Q08562 1619 aa3.97□□□□□ -1.77
PDE1YGL248W YCR085WP25650 117 aa3.97□□□□□ -1.77
PDE1YGL248W FZF1P32805 299 aa3.97□□□□□ -1.77
PDE1YGL248W YBL059WP34224 193 aa3.97□□□□□ -1.77
PDE1YGL248W REE1P40893 198 aa3.97□□□□□ -1.77
PDE1YGL248W TMC1Q08422 150 aaPredicted RBP3.97□□□□□ -1.77
PDE1YGL248W COX4P04037 155 aa3.96□□□□□ -1.78
PDE1YGL248W ECM34P38728 170 aa3.96□□□□□ -1.78
PDE1YGL248W SVP26P38869 228 aa3.96□□□□□ -1.78
PDE1YGL248W YML079WQ03629 201 aa3.96□□□□□ -1.78
PDE1YGL248W IRC23Q08416 157 aa3.96□□□□□ -1.78
PDE1YGL248W ROM2P51862 1356 aaKnown RBP3.96□□□□□ -1.78
PDE1YGL248W NUP159P40477 1460 aa3.95□□□□□ -1.78
PDE1YGL248W YHR032W-AP0C5N6 59 aa3.95□□□□□ -1.78
PDE1YGL248W YEL045CP32616 141 aa3.95□□□□□ -1.78
PDE1YGL248W YHR138CP38841 114 aaPredicted RBP3.95□□□□□ -1.78
PDE1YGL248W SWM2P40342 146 aa3.95□□□□□ -1.78
PDE1YGL248W IGO1P53897 168 aa3.95□□□□□ -1.78
PDE1YGL248W IRC19Q07843 230 aa3.95□□□□□ -1.78
PDE1YGL248W YOR015WQ12169 119 aa3.95□□□□□ -1.78
PDE1YGL248W DUR1,2P32528 1835 aaKnown RBP3.95□□□□□ -1.78
PDE1YGL248W PDR5P33302 1511 aaKnown RBP3.95□□□□□ -1.78
PDE1YGL248W TY2B-LR1P0C2J3 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-FP0CX63 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-GR2P0CX64 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-CP25384 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-DR2Q03494 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-DR3Q07791 1770 aaKnown RBP3.94□□□□□ -1.78
PDE1YGL248W TY2B-OR1Q12113 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-DR1Q12472 1770 aa3.94□□□□□ -1.78
PDE1YGL248W TY2B-OR2Q12501 1770 aa3.94□□□□□ -1.78
PDE1YGL248W VPS15P22219 1454 aa3.94□□□□□ -1.78
PDE1YGL248W SSS1P35179 80 aa3.94□□□□□ -1.78
PDE1YGL248W HSP10P38910 106 aa3.94□□□□□ -1.78
PDE1YGL248W YER187WP40102 141 aa3.94□□□□□ -1.78
PDE1YGL248W YDR042CQ03205 200 aa3.94□□□□□ -1.78
PDE1YGL248W NAT5Q08689 176 aa3.94□□□□□ -1.78
PDE1YGL248W DAD1Q12248 94 aa3.94□□□□□ -1.78
PDE1YGL248W EMC6Q12431 108 aa3.94□□□□□ -1.78
PDE1YGL248W YLR363W-AQ3E747 85 aa3.94□□□□□ -1.78
PDE1YGL248W TY3B-GQ99315 1547 aa3.94□□□□□ -1.78
PDE1YGL248W FLO11P08640 1367 aa3.93□□□□□ -1.78
PDE1YGL248W RPS25BP0C0T4 108 aaKnown RBP3.93□□□□□ -1.78
PDE1YGL248W RPA12P32529 125 aaKnown RBP3.93□□□□□ -1.78
PDE1YGL248W MID2P36027 376 aa3.93□□□□□ -1.78
PDE1YGL248W HYR1P40581 163 aaKnown RBP3.93□□□□□ -1.78
PDE1YGL248W PIR1Q03178 341 aa3.93□□□□□ -1.78
PDE1YGL248W PRM3Q08931 133 aa3.93□□□□□ -1.78
PDE1YGL248W VTH1P40438 1549 aa3.93□□□□□ -1.78
PDE1YGL248W VTH2P40890 1549 aa3.93□□□□□ -1.78
PDE1YGL248W YLR419WQ06698 1435 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms