RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W TIR1P10863 254 aa0.97□□□□□ -2.25
MDS3YGL197W SUI1P32911 108 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W PDX3P38075 228 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W IRC22P40006 225 aa0.97□□□□□ -2.25
MDS3YGL197W NBP35P52920 328 aa0.97□□□□□ -2.25
MDS3YGL197W EMC4P53073 190 aa0.97□□□□□ -2.25
MDS3YGL197W GRX8Q05926 109 aa0.97□□□□□ -2.25
MDS3YGL197W YLR118CQ12354 227 aa0.97□□□□□ -2.25
MDS3YGL197W SCS22Q6Q595 175 aa0.97□□□□□ -2.25
MDS3YGL197W PAI3P01094 68 aa0.97□□□□□ -2.25
MDS3YGL197W MRS1P07266 363 aa0.97□□□□□ -2.25
MDS3YGL197W EHD3P28817 500 aa0.97□□□□□ -2.25
MDS3YGL197W QRI5P32344 111 aa0.97□□□□□ -2.25
MDS3YGL197W YKL102CP34249 101 aa0.97□□□□□ -2.25
MDS3YGL197W YKL162CP36052 402 aa0.97□□□□□ -2.25
MDS3YGL197W ERV15P38312 142 aa0.97□□□□□ -2.25
MDS3YGL197W HSP10P38910 106 aa0.97□□□□□ -2.25
MDS3YGL197W YEA6P39953 335 aa0.97□□□□□ -2.25
MDS3YGL197W FLX1P40464 311 aa0.97□□□□□ -2.25
MDS3YGL197W AVT7P40501 490 aa0.97□□□□□ -2.25
MDS3YGL197W YMR166CQ03829 368 aa0.97□□□□□ -2.25
MDS3YGL197W TVP18Q04767 167 aa0.97□□□□□ -2.25
MDS3YGL197W YOR186WQ08560 144 aa0.97□□□□□ -2.25
MDS3YGL197W RAD28Q12021 506 aa0.97□□□□□ -2.25
MDS3YGL197W YPL247CQ12523 523 aa0.97□□□□□ -2.25
MDS3YGL197W YNL277W-AQ3E7Z0 62 aa0.97□□□□□ -2.25
MDS3YGL197W IGO2Q9P305 131 aa0.97□□□□□ -2.25
MDS3YGL197W UBI4P0CG63 381 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W SFK1P35735 353 aa0.97□□□□□ -2.25
MDS3YGL197W MSL1P40567 111 aaPredicted RBP0.97□□□□□ -2.25
MDS3YGL197W CUP9P41817 306 aa0.97□□□□□ -2.25
MDS3YGL197W YGR018CP53211 109 aa0.97□□□□□ -2.25
MDS3YGL197W PBP4Q07362 185 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W ATP5P09457 212 aa0.97□□□□□ -2.25
MDS3YGL197W PRE7P23724 241 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W AHT1P29589 182 aa0.97□□□□□ -2.25
MDS3YGL197W SPT4P32914 102 aaPredicted RBP0.97□□□□□ -2.25
MDS3YGL197W SRX1P36077 127 aa0.97□□□□□ -2.25
MDS3YGL197W SNU13P39990 126 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W RSM10Q03201 203 aa0.97□□□□□ -2.25
MDS3YGL197W GRH1Q04410 372 aaKnown RBP0.97□□□□□ -2.25
MDS3YGL197W FIT1Q04433 528 aa0.97□□□□□ -2.25
MDS3YGL197W SHH3Q04487 196 aa0.97□□□□□ -2.25
MDS3YGL197W KEI1Q06346 221 aa0.97□□□□□ -2.25
MDS3YGL197W VAR1P02381 398 aa0.96□□□□□ -2.26
MDS3YGL197W UBC5P15732 148 aa0.96□□□□□ -2.26
MDS3YGL197W FUN14P18411 198 aa0.96□□□□□ -2.26
MDS3YGL197W YCR101CP25607 182 aa0.96□□□□□ -2.26
MDS3YGL197W ECM31P38122 312 aa0.96□□□□□ -2.26
MDS3YGL197W YBL081WP38180 368 aaKnown RBP0.96□□□□□ -2.26
MDS3YGL197W SPC25P40014 221 aa0.96□□□□□ -2.26
MDS3YGL197W YER121WP40076 114 aa0.96□□□□□ -2.26
MDS3YGL197W MOB1P40484 314 aa0.96□□□□□ -2.26
MDS3YGL197W YGL235WP53071 178 aa0.96□□□□□ -2.26
MDS3YGL197W YGR164WP53291 111 aa0.96□□□□□ -2.26
MDS3YGL197W SWS2P53937 143 aa0.96□□□□□ -2.26
MDS3YGL197W YNL046WP53956 172 aa0.96□□□□□ -2.26
MDS3YGL197W RNH202Q05635 350 aa0.96□□□□□ -2.26
MDS3YGL197W YLR179CQ06252 201 aaKnown RBP0.96□□□□□ -2.26
MDS3YGL197W YPR174CQ06616 221 aaPredicted RBP0.96□□□□□ -2.26
MDS3YGL197W RFU1Q08003 200 aa0.96□□□□□ -2.26
MDS3YGL197W COQ10Q08058 207 aa0.96□□□□□ -2.26
MDS3YGL197W HRT1Q08273 121 aa0.96□□□□□ -2.26
MDS3YGL197W TIR4Q12218 487 aaPredicted RBP0.96□□□□□ -2.26
MDS3YGL197W ATG5Q12380 294 aa0.96□□□□□ -2.26
MDS3YGL197W COX10P21592 462 aa0.96□□□□□ -2.26
MDS3YGL197W YCR099CP25657 155 aa0.96□□□□□ -2.26
MDS3YGL197W YHR130CP38834 111 aa0.96□□□□□ -2.26
MDS3YGL197W GTT1P40582 234 aa0.96□□□□□ -2.26
MDS3YGL197W PRM10P42946 383 aa0.96□□□□□ -2.26
MDS3YGL197W PAM16P42949 149 aa0.96□□□□□ -2.26
MDS3YGL197W CAB4P53332 305 aa0.96□□□□□ -2.26
MDS3YGL197W RSM19P53733 91 aaPredicted RBP0.96□□□□□ -2.26
MDS3YGL197W FCF1Q05498 189 aaPredicted RBP0.96□□□□□ -2.26
MDS3YGL197W GPI11Q06636 219 aa0.96□□□□□ -2.26
MDS3YGL197W YOL160WQ08321 113 aa0.96□□□□□ -2.26
MDS3YGL197W YOR292CQ08743 309 aa0.96□□□□□ -2.26
MDS3YGL197W YBL008W-AQ3E821 79 aa0.96□□□□□ -2.26
MDS3YGL197W ECM12O13529 151 aa0.96□□□□□ -2.26
MDS3YGL197W UTP30P36144 274 aaKnown RBP0.96□□□□□ -2.26
MDS3YGL197W YKR070WP36151 352 aaKnown RBP0.96□□□□□ -2.26
MDS3YGL197W SDH4P37298 181 aa0.96□□□□□ -2.26
MDS3YGL197W SMP1P38128 452 aa0.96□□□□□ -2.26
MDS3YGL197W YHC1Q05900 231 aaKnown RBP0.96□□□□□ -2.26
MDS3YGL197W FSF1Q12029 327 aaKnown RBP0.96□□□□□ -2.26
MDS3YGL197W MCP1Q12106 302 aa0.96□□□□□ -2.26
MDS3YGL197W COX5AP00424 153 aa0.95□□□□□ -2.26
MDS3YGL197W TOM40P23644 387 aaKnown RBP0.95□□□□□ -2.26
MDS3YGL197W MSA2P36157 363 aa0.95□□□□□ -2.26
MDS3YGL197W YBR096WP38256 230 aa0.95□□□□□ -2.26
MDS3YGL197W YNL217WP40152 326 aa0.95□□□□□ -2.26
MDS3YGL197W DIE2P50076 525 aa0.95□□□□□ -2.26
MDS3YGL197W YKR005CQ02203 525 aa0.95□□□□□ -2.26
MDS3YGL197W MET31Q03081 177 aa0.95□□□□□ -2.26
MDS3YGL197W NAT5Q08689 176 aa0.95□□□□□ -2.26
MDS3YGL197W YPL278CQ08990 100 aa0.95□□□□□ -2.26
MDS3YGL197W KRE1P17260 313 aa0.95□□□□□ -2.26
MDS3YGL197W EMP24P32803 203 aaKnown RBP0.95□□□□□ -2.26
MDS3YGL197W YBR090CP38253 122 aa0.95□□□□□ -2.26
MDS3YGL197W YEL073CP39974 107 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms