RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C SLO1Q3E784 85 aa1.97□□□□□ -2.09
SCL1YGL011C PET20Q99373 253 aa1.97□□□□□ -2.09
SCL1YGL011C PDR11P40550 1411 aa1.97□□□□□ -2.09
SCL1YGL011C VAR1P02381 398 aa1.96□□□□□ -2.1
SCL1YGL011C QCR2P07257 368 aa1.96□□□□□ -2.1
SCL1YGL011C FUN14P18411 198 aa1.96□□□□□ -2.1
SCL1YGL011C SEC59P20048 519 aa1.96□□□□□ -2.1
SCL1YGL011C STP22P25604 385 aa1.96□□□□□ -2.1
SCL1YGL011C UGX2P32772 223 aa1.96□□□□□ -2.1
SCL1YGL011C SFK1P35735 353 aa1.96□□□□□ -2.1
SCL1YGL011C PDX3P38075 228 aaKnown RBP1.96□□□□□ -2.1
SCL1YGL011C LSM2P38203 95 aaKnown RBP1.96□□□□□ -2.1
SCL1YGL011C YEL008WP40001 126 aa1.96□□□□□ -2.1
SCL1YGL011C YFL065CP43539 102 aa1.96□□□□□ -2.1
SCL1YGL011C TIM13P53299 105 aa1.96□□□□□ -2.1
SCL1YGL011C YDR366CP87287 132 aa1.96□□□□□ -2.1
SCL1YGL011C YPL067CQ02754 198 aa1.96□□□□□ -2.1
SCL1YGL011C HPT1Q04178 221 aaKnown RBP1.96□□□□□ -2.1
SCL1YGL011C SEN15Q04675 128 aa1.96□□□□□ -2.1
SCL1YGL011C GAL83Q04739 417 aa1.96□□□□□ -2.1
SCL1YGL011C NUP188P52593 1655 aaKnown RBP1.96□□□□□ -2.1
SCL1YGL011C UBR1P19812 1950 aa1.96□□□□□ -2.1
SCL1YGL011C TY1B-NL2Q99337 1749 aaKnown RBP1.95□□□□□ -2.1
SCL1YGL011C YCL042WP25572 119 aa1.95□□□□□ -2.1
SCL1YGL011C SRB6P32570 121 aa1.95□□□□□ -2.1
SCL1YGL011C RPB7P34087 171 aa1.95□□□□□ -2.1
SCL1YGL011C DER1P38307 211 aa1.95□□□□□ -2.1
SCL1YGL011C IPI1P38803 334 aaPredicted RBP1.95□□□□□ -2.1
SCL1YGL011C SRP14P38985 146 aa1.95□□□□□ -2.1
SCL1YGL011C PKR1Q03880 122 aaKnown RBP1.95□□□□□ -2.1
SCL1YGL011C TVP18Q04767 167 aa1.95□□□□□ -2.1
SCL1YGL011C PEX11Q12462 236 aa1.95□□□□□ -2.1
SCL1YGL011C YGL194C-AQ2V2P6 80 aa1.95□□□□□ -2.1
SCL1YGL011C PCC1Q3E833 88 aa1.95□□□□□ -2.1
SCL1YGL011C RIF1P29539 1916 aa1.95□□□□□ -2.1
SCL1YGL011C YOR1P53049 1477 aa1.94□□□□□ -2.1
SCL1YGL011C COX5BP00425 151 aa1.94□□□□□ -2.1
SCL1YGL011C ADK1P07170 222 aaKnown RBP1.94□□□□□ -2.1
SCL1YGL011C RRT1P38192 103 aa1.94□□□□□ -2.1
SCL1YGL011C YPT31P38555 223 aaKnown RBP1.94□□□□□ -2.1
SCL1YGL011C VPS28Q02767 242 aa1.94□□□□□ -2.1
SCL1YGL011C MAK3Q03503 176 aa1.94□□□□□ -2.1
SCL1YGL011C CNL1Q06333 122 aa1.94□□□□□ -2.1
SCL1YGL011C ATG10Q07879 167 aa1.94□□□□□ -2.1
SCL1YGL011C YPR202WQ08993 238 aa1.94□□□□□ -2.1
SCL1YGL011C YLR361C-AQ3E795 98 aa1.94□□□□□ -2.1
SCL1YGL011C YRF1-1P0CX20 1796 aa1.93□□□□□ -2.1
SCL1YGL011C YRF1-5P0CX21 1796 aa1.93□□□□□ -2.1
SCL1YGL011C YRF1-8P0CX22 1796 aa1.93□□□□□ -2.1
SCL1YGL011C HAP2P06774 265 aa1.93□□□□□ -2.1
SCL1YGL011C SPS2P08459 502 aa1.93□□□□□ -2.1
SCL1YGL011C YHR212W-AP0CX91 67 aa1.93□□□□□ -2.1
SCL1YGL011C HAP3P13434 144 aa1.93□□□□□ -2.1
SCL1YGL011C MRP49P32388 137 aa1.93□□□□□ -2.1
SCL1YGL011C PRS3P38689 320 aaKnown RBP1.93□□□□□ -2.1
SCL1YGL011C FYV4P38783 130 aaPredicted RBP1.93□□□□□ -2.1
SCL1YGL011C YEL067CP39978 195 aa1.93□□□□□ -2.1
SCL1YGL011C GLR1P41921 483 aaKnown RBP1.93□□□□□ -2.1
SCL1YGL011C HHO1P53551 258 aa1.93□□□□□ -2.1
SCL1YGL011C SDH7Q04401 133 aa1.93□□□□□ -2.1
SCL1YGL011C YLR099W-AQ3E798 87 aa1.93□□□□□ -2.1
SCL1YGL011C RSF2P46974 1380 aa1.93□□□□□ -2.1
SCL1YGL011C YBT1P32386 1661 aa1.93□□□□□ -2.1
SCL1YGL011C DNF3Q12674 1656 aa1.93□□□□□ -2.1
SCL1YGL011C YCR023CP25351 611 aa1.92□□□□□ -2.1
SCL1YGL011C SUA7P29055 345 aaPredicted RBP1.92□□□□□ -2.1
SCL1YGL011C MRPL11P36521 249 aaPredicted RBP1.92□□□□□ -2.1
SCL1YGL011C YBR013CP38215 129 aa1.92□□□□□ -2.1
SCL1YGL011C SNU13P39990 126 aaKnown RBP1.92□□□□□ -2.1
SCL1YGL011C YGL101WP53144 215 aa1.92□□□□□ -2.1
SCL1YGL011C TIM8P57744 87 aa1.92□□□□□ -2.1
SCL1YGL011C PIR1Q03178 341 aa1.92□□□□□ -2.1
SCL1YGL011C UPS3Q04006 179 aa1.92□□□□□ -2.1
SCL1YGL011C MED11Q99278 115 aa1.92□□□□□ -2.1
SCL1YGL011C YOR093CQ12275 1648 aa1.91□□□□□ -2.1
SCL1YGL011C ATP5P09457 212 aa1.91□□□□□ -2.1
SCL1YGL011C YBR032WP38223 100 aa1.91□□□□□ -2.1
SCL1YGL011C YHR130CP38834 111 aa1.91□□□□□ -2.1
SCL1YGL011C APS2Q00381 147 aa1.91□□□□□ -2.1
SCL1YGL011C ELC1Q03071 99 aa1.91□□□□□ -2.1
SCL1YGL011C FMN1Q03778 218 aa1.91□□□□□ -2.1
SCL1YGL011C UPS1Q05776 175 aa1.91□□□□□ -2.1
SCL1YGL011C YIR021W-AQ3E739 70 aa1.91□□□□□ -2.1
SCL1YGL011C YIL134C-AQ45U18 67 aa1.91□□□□□ -2.1
SCL1YGL011C VTH1P40438 1549 aa1.91□□□□□ -2.1
SCL1YGL011C VTH2P40890 1549 aa1.91□□□□□ -2.1
SCL1YGL011C YRF1-3P0CX14 1859 aa1.9□□□□□ -2.1
SCL1YGL011C YRF1-7P0CX15 1859 aa1.9□□□□□ -2.1
SCL1YGL011C MOT1P32333 1867 aa1.9□□□□□ -2.1
SCL1YGL011C YRF1-6P53819 1859 aa1.9□□□□□ -2.1
SCL1YGL011C PAI3P01094 68 aa1.9□□□□□ -2.11
SCL1YGL011C INO4P13902 151 aa1.9□□□□□ -2.11
SCL1YGL011C ANB1P19211 157 aa1.9□□□□□ -2.11
SCL1YGL011C ATG8P38182 117 aaRIP-Chip data1.9□□□□□ -2.11not detected
SCL1YGL011C YNL200CP40165 246 aaKnown RBP1.9□□□□□ -2.11
SCL1YGL011C SWM2P40342 146 aa1.9□□□□□ -2.11
SCL1YGL011C VMA21P41806 77 aa1.9□□□□□ -2.11
SCL1YGL011C XPT1P47165 209 aa1.9□□□□□ -2.11
SCL1YGL011C TTI2P47168 421 aa1.9□□□□□ -2.11
SCL1YGL011C TMA23Q03525 211 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms