RNA–Protein interactions for RNA: YFR022W

ROG3, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROG3, Length 2,202 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROG3	YFR022W	MTC7	P32633	139 aa		4.58	□□□□□ -1.68
ROG3	YFR022W	SVP26	P38869	228 aa		4.58	□□□□□ -1.68
ROG3	YFR022W	YNL200C	P40165	246 aa	Known RBP	4.58	□□□□□ -1.68
ROG3	YFR022W	SKI6	P46948	246 aa	Predicted RBP	4.58	□□□□□ -1.68
ROG3	YFR022W	SDS23	P53172	527 aa		4.58	□□□□□ -1.68
ROG3	YFR022W	CRH1	P53301	507 aa		4.58	□□□□□ -1.68
ROG3	YFR022W	HST4	P53688	370 aa		4.58	□□□□□ -1.68
ROG3	YFR022W	YPL038W-A	Q3E7B4	63 aa		4.58	□□□□□ -1.68
ROG3	YFR022W	YCR006C	P25350	157 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	SMP1	P38128	452 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	YHR140W	P38842	239 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	YNR071C	P53757	342 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	YPS3	Q12303	508 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	CCH1	P50077	2039 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	MBB1	P39534	108 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	BRP1	P53194	125 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	YIL014C-A	Q02598	104 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	MET32	Q12041	191 aa		4.57	□□□□□ -1.68
ROG3	YFR022W	YHR139C-A	O13536	103 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	APS1	P35181	156 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	MST27	P53176	234 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	MIM1	Q08176	113 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	MCH4	Q08268	501 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	AQY1	P0CD91	305 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	VMA3	P25515	160 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	FZF1	P32805	299 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	OM14	P38325	134 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	CPD1	P53314	239 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	SLG1	P54867	378 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	YPR011C	Q12251	326 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	CSR2	Q12734	1121 aa		4.56	□□□□□ -1.68
ROG3	YFR022W	QRI5	P32344	111 aa		4.55	□□□□□ -1.68
ROG3	YFR022W	FIP1	P45976	327 aa		4.55	□□□□□ -1.68
ROG3	YFR022W	SPG3	Q04398	127 aa	Predicted RBP	4.55	□□□□□ -1.68
ROG3	YFR022W	YLR281C	Q05863	155 aa		4.55	□□□□□ -1.68
ROG3	YFR022W	GAT3	Q07928	141 aa		4.55	□□□□□ -1.68
ROG3	YFR022W	PCL2	P25693	308 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	REC114	P32841	428 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
ROG3	YFR022W	RRT13	P40042	185 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	IST3	P40565	148 aa	Predicted RBP	4.54	□□□□□ -1.68
ROG3	YFR022W	YDR209C	Q03480	137 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	YLR149C	Q99296	730 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	BET1	P22804	142 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	RPS2	P25443	254 aa	Known RBP	4.54	□□□□□ -1.68
ROG3	YFR022W	ECM15	P35195	104 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	YIL163C	P40448	117 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	YFR054C	P43622	192 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	VPS55	P47111	140 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	GLO1	P50107	326 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	ROT1	Q03691	256 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	LSM6	Q06406	86 aa	Known RBP	4.54	□□□□□ -1.68
ROG3	YFR022W	YOR186W	Q08560	144 aa		4.54	□□□□□ -1.68
ROG3	YFR022W	DAT1	P13483	248 aa	Known RBP	4.53	□□□□□ -1.68
ROG3	YFR022W	OST1	P41543	476 aa	Known RBP	4.53	□□□□□ -1.68
ROG3	YFR022W	CIS3	P47001	227 aa		4.53	□□□□□ -1.68
ROG3	YFR022W	VEL1	P53058	206 aa		4.53	□□□□□ -1.68
ROG3	YFR022W	RPL23A	P0CX41	137 aa	Known RBP	4.53	□□□□□ -1.68
ROG3	YFR022W	RPL23B	P0CX42	137 aa	Known RBP	4.53	□□□□□ -1.68
ROG3	YFR022W	RPL18A	P0CX49	186 aa	Known RBP	4.53	□□□□□ -1.68
ROG3	YFR022W	RPL18B	P0CX50	186 aa	Known RBP	4.53	□□□□□ -1.68
ROG3	YFR022W	CSE2	P33308	149 aa		4.53	□□□□□ -1.68
ROG3	YFR022W	BUD8	P41698	603 aa		4.53	□□□□□ -1.68
ROG3	YFR022W	SUT2	Q12286	268 aa		4.53	□□□□□ -1.68
ROG3	YFR022W	IGO2	Q9P305	131 aa		4.53	□□□□□ -1.68
ROG3	YFR022W	YMR316C-A	I2HB70	103 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	ERG2	P32352	222 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	CSL4	P53859	292 aa	Predicted RBP	4.52	□□□□□ -1.69
ROG3	YFR022W	TDA7	P53882	636 aa	Predicted RBP	4.52	□□□□□ -1.69
ROG3	YFR022W	EMC6	Q12431	108 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	GGC1	P38988	300 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	YEL073C	P39974	107 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	EAF6	P47128	113 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	YPL062W	Q02781	134 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	YMR007W	Q03675	126 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	YDR102C	Q03864	110 aa		4.52	□□□□□ -1.69
ROG3	YFR022W	Q0255	P03881	472 aa		4.51	□□□□□ -1.69
ROG3	YFR022W	IMP1	P28627	190 aa		4.51	□□□□□ -1.69
ROG3	YFR022W	MED6	P38782	295 aa		4.51	□□□□□ -1.69
ROG3	YFR022W	SHH4	Q06236	168 aa		4.51	□□□□□ -1.69
ROG3	YFR022W	YMR175W-A	Q3E766	64 aa		4.51	□□□□□ -1.69
ROG3	YFR022W	FLO9	P39712	1322 aa		4.51	□□□□□ -1.69
ROG3	YFR022W	UBC4	P15731	148 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	YGR269W	P40326	108 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	YDR381C-A	Q3E6R5	114 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	SPO24	Q3E752	67 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	PIS1	P06197	220 aa	Known RBP	4.5	□□□□□ -1.69
ROG3	YFR022W	RPL30	P14120	105 aa	Known RBP	4.5	□□□□□ -1.69
ROG3	YFR022W	DSE2	P38844	325 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	YPI1	P43587	155 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	RSM19	P53733	91 aa	Predicted RBP	4.5	□□□□□ -1.69
ROG3	YFR022W	HAL1	Q01766	294 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	RLM1	Q12224	676 aa		4.5	□□□□□ -1.69
ROG3	YFR022W	MRPL31	P14063	131 aa	Predicted RBP	4.49	□□□□□ -1.69
ROG3	YFR022W	RFA2	P26754	273 aa	Known RBP	4.49	□□□□□ -1.69
ROG3	YFR022W	TIM18	Q08749	192 aa		4.49	□□□□□ -1.69
ROG3	YFR022W	YOR387C	Q08910	206 aa		4.49	□□□□□ -1.69
ROG3	YFR022W	CYR1	P08678	2026 aa	Known RBP	4.49	□□□□□ -1.69
ROG3	YFR022W	RPP1	P38786	293 aa		4.49	□□□□□ -1.69
ROG3	YFR022W	LST8	P41318	303 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 718.1 ms