RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	XRN1	P22147	1528 aa	Known RBP	3.04	□□□□□ -1.92
SPI1	YER150W	PAI3	P01094	68 aa		3.04	□□□□□ -1.92
SPI1	YER150W	RPB9	P27999	122 aa		3.04	□□□□□ -1.92
SPI1	YER150W	YHL018W	P38744	120 aa	Predicted RBP	3.04	□□□□□ -1.92
SPI1	YER150W	YFL065C	P43539	102 aa		3.04	□□□□□ -1.92
SPI1	YER150W	MPC3	P53311	146 aa		3.04	□□□□□ -1.92
SPI1	YER150W	RSM19	P53733	91 aa	Predicted RBP	3.04	□□□□□ -1.92
SPI1	YER150W	MIX14	Q04341	121 aa		3.04	□□□□□ -1.92
SPI1	YER150W	YPR203W	Q08994	102 aa		3.04	□□□□□ -1.92
SPI1	YER150W	RRT13	P40042	185 aa		3.03	□□□□□ -1.92
SPI1	YER150W	PEP8	P40335	379 aa		3.03	□□□□□ -1.92
SPI1	YER150W	VMA21	P41806	77 aa		3.03	□□□□□ -1.92
SPI1	YER150W	HUR1	P45820	110 aa		3.03	□□□□□ -1.92
SPI1	YER150W	MZM1	Q03429	123 aa	Predicted RBP	3.03	□□□□□ -1.92
SPI1	YER150W	SOM1	Q05676	74 aa		3.03	□□□□□ -1.92
SPI1	YER150W	PBA1	Q05778	276 aa		3.03	□□□□□ -1.92
SPI1	YER150W	SEC7	P11075	2009 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	YCR043C	P25361	127 aa		3.02	□□□□□ -1.93
SPI1	YER150W	FYV5	P25585	152 aa		3.02	□□□□□ -1.93
SPI1	YER150W	YCR085W	P25650	117 aa		3.02	□□□□□ -1.93
SPI1	YER150W	MIG3	P39943	394 aa		3.02	□□□□□ -1.93
SPI1	YER150W	SUN4	P53616	420 aa		3.02	□□□□□ -1.93
SPI1	YER150W	YLR296W	Q05898	108 aa		3.02	□□□□□ -1.93
SPI1	YER150W	YER078W-A	Q3E7A2	54 aa		3.02	□□□□□ -1.93
SPI1	YER150W	SUS1	Q6WNK7	96 aa		3.02	□□□□□ -1.93
SPI1	YER150W	YAL067W-A	Q8TGK6	75 aa		3.02	□□□□□ -1.93
SPI1	YER150W	YCL021W-A	Q96VH3	125 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-DR5	P0C2I2	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-DR6	P0C2I3	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-LR2	P0C2I5	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-JR1	P47098	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-ML2	Q03434	1755 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-ER1	Q03612	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-ML1	Q04711	1755 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-GR2	Q12269	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-OL	Q12273	1755 aa		3.02	□□□□□ -1.93
SPI1	YER150W	TY1B-PL	Q12414	1755 aa	Known RBP	3.02	□□□□□ -1.93
SPI1	YER150W	NUP159	P40477	1460 aa		3.02	□□□□□ -1.93
SPI1	YER150W	MMS1	Q06211	1407 aa		3.02	□□□□□ -1.93
SPI1	YER150W	YEL045C	P32616	141 aa		3.01	□□□□□ -1.93
SPI1	YER150W	FZF1	P32805	299 aa		3.01	□□□□□ -1.93
SPI1	YER150W	SSS1	P35179	80 aa		3.01	□□□□□ -1.93
SPI1	YER150W	SVP26	P38869	228 aa		3.01	□□□□□ -1.93
SPI1	YER150W	REE1	P40893	198 aa		3.01	□□□□□ -1.93
SPI1	YER150W	YRF1-2	P40105	1681 aa		3.01	□□□□□ -1.93
SPI1	YER150W	SRB8	P25648	1427 aa		3.01	□□□□□ -1.93
SPI1	YER150W	FAS2	P19097	1887 aa	Known RBP	3.01	□□□□□ -1.93
SPI1	YER150W	ROM2	P51862	1356 aa	Known RBP	3	□□□□□ -1.93
SPI1	YER150W	COX4	P04037	155 aa		3	□□□□□ -1.93
SPI1	YER150W	MIG1	P27705	504 aa		3	□□□□□ -1.93
SPI1	YER150W	YHR138C	P38841	114 aa	Predicted RBP	3	□□□□□ -1.93
SPI1	YER150W	SWM2	P40342	146 aa		3	□□□□□ -1.93
SPI1	YER150W	IRC19	Q07843	230 aa		3	□□□□□ -1.93
SPI1	YER150W	IRC23	Q08416	157 aa		3	□□□□□ -1.93
SPI1	YER150W	YBR298C-A	Q8TGK4	73 aa		3	□□□□□ -1.93
SPI1	YER150W	TY1B-GR3	Q12316	1755 aa		3	□□□□□ -1.93
SPI1	YER150W	TY1B-OR	Q92393	1755 aa		3	□□□□□ -1.93
SPI1	YER150W	AUS1	Q08409	1394 aa		3	□□□□□ -1.93
SPI1	YER150W	SWR1	Q05471	1514 aa		2.99	□□□□□ -1.93
SPI1	YER150W	RPS25B	P0C0T4	108 aa	Known RBP	2.99	□□□□□ -1.93
SPI1	YER150W	YHR032W-A	P0C5N6	59 aa		2.99	□□□□□ -1.93
SPI1	YER150W	RPA12	P32529	125 aa	Known RBP	2.99	□□□□□ -1.93
SPI1	YER150W	MID2	P36027	376 aa		2.99	□□□□□ -1.93
SPI1	YER150W	HSP10	P38910	106 aa		2.99	□□□□□ -1.93
SPI1	YER150W	YER187W	P40102	141 aa		2.99	□□□□□ -1.93
SPI1	YER150W	HYR1	P40581	163 aa	Known RBP	2.99	□□□□□ -1.93
SPI1	YER150W	SNN1	P48232	102 aa		2.99	□□□□□ -1.93
SPI1	YER150W	IGO1	P53897	168 aa		2.99	□□□□□ -1.93
SPI1	YER150W	YDR042C	Q03205	200 aa		2.99	□□□□□ -1.93
SPI1	YER150W	YML079W	Q03629	201 aa		2.99	□□□□□ -1.93
SPI1	YER150W	PRM3	Q08931	133 aa		2.99	□□□□□ -1.93
SPI1	YER150W	DAD1	Q12248	94 aa		2.99	□□□□□ -1.93
SPI1	YER150W	EMC6	Q12431	108 aa		2.99	□□□□□ -1.93
SPI1	YER150W	YLR363W-A	Q3E747	85 aa		2.99	□□□□□ -1.93
SPI1	YER150W	DNA2	P38859	1522 aa		2.98	□□□□□ -1.93
SPI1	YER150W	YPK9	Q12697	1472 aa		2.98	□□□□□ -1.93
SPI1	YER150W	YBL059W	P34224	193 aa		2.98	□□□□□ -1.93
SPI1	YER150W	YKR045C	P36138	183 aa		2.98	□□□□□ -1.93
SPI1	YER150W	ECM34	P38728	170 aa		2.98	□□□□□ -1.93
SPI1	YER150W	TMC1	Q08422	150 aa	Predicted RBP	2.98	□□□□□ -1.93
SPI1	YER150W	NAT5	Q08689	176 aa		2.98	□□□□□ -1.93
SPI1	YER150W	YOR015W	Q12169	119 aa		2.98	□□□□□ -1.93
SPI1	YER150W	MHF1	Q3E835	90 aa		2.98	□□□□□ -1.93
SPI1	YER150W	FLO11	P08640	1367 aa		2.98	□□□□□ -1.93
SPI1	YER150W	MYO4	P32492	1471 aa		2.97	□□□□□ -1.93
SPI1	YER150W	MDM35	O60200	86 aa		2.97	□□□□□ -1.93
SPI1	YER150W	PAU21	P0CE86	164 aa		2.97	□□□□□ -1.93
SPI1	YER150W	PAU22	P0CE87	164 aa		2.97	□□□□□ -1.93
SPI1	YER150W	KRE1	P17260	313 aa		2.97	□□□□□ -1.93
SPI1	YER150W	ASK1	P35734	292 aa		2.97	□□□□□ -1.93
SPI1	YER150W	PIR1	Q03178	341 aa		2.97	□□□□□ -1.93
SPI1	YER150W	YDL241W	Q07738	123 aa		2.97	□□□□□ -1.93
SPI1	YER150W	YPL261C	Q08976	102 aa		2.97	□□□□□ -1.93
SPI1	YER150W	RRT15	Q3E811	62 aa		2.97	□□□□□ -1.93
SPI1	YER150W	ENV10	Q99382	181 aa		2.97	□□□□□ -1.93
SPI1	YER150W	MSB2	P32334	1306 aa		2.96	□□□□□ -1.93
SPI1	YER150W	SMD3	P43321	101 aa	Known RBP	2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms