RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C SPC24Q04477 213 aa0.48□□□□□ -2.33
SMB1YER029C TVP18Q04767 167 aa0.48□□□□□ -2.33
SMB1YER029C NKP2Q06162 153 aa0.48□□□□□ -2.33
SMB1YER029C IRC19Q07843 230 aa0.48□□□□□ -2.33
SMB1YER029C RIB3Q99258 208 aa0.48□□□□□ -2.33
SMB1YER029C DDP1Q99321 188 aaKnown RBP0.48□□□□□ -2.33
SMB1YER029C Q0144Q9ZZW2 109 aa0.48□□□□□ -2.33
SMB1YER029C ROM2P51862 1356 aaKnown RBP0.47□□□□□ -2.33
SMB1YER029C COX5BP00425 151 aa0.47□□□□□ -2.33
SMB1YER029C FYV5P25585 152 aa0.47□□□□□ -2.33
SMB1YER029C YCR050CP25630 102 aa0.47□□□□□ -2.33
SMB1YER029C ATG8P38182 117 aaRIP-Chip data0.47□□□□□ -2.33not detected
SMB1YER029C RPS20P38701 121 aaKnown RBP0.47□□□□□ -2.33
SMB1YER029C YHR140WP38842 239 aa0.47□□□□□ -2.33
SMB1YER029C VMA7P39111 118 aa0.47□□□□□ -2.33
SMB1YER029C YAL064WP39711 94 aa0.47□□□□□ -2.33
SMB1YER029C DIE2P50076 525 aa0.47□□□□□ -2.33
SMB1YER029C SPG1P50088 95 aa0.47□□□□□ -2.33
SMB1YER029C YGL149WP53116 101 aa0.47□□□□□ -2.33
SMB1YER029C YCL001W-AP87012 153 aa0.47□□□□□ -2.33
SMB1YER029C SAE3P89114 91 aa0.47□□□□□ -2.33
SMB1YER029C APS2Q00381 147 aa0.47□□□□□ -2.33
SMB1YER029C SED1Q01589 338 aa0.47□□□□□ -2.33
SMB1YER029C RUB1Q03919 77 aa0.47□□□□□ -2.33
SMB1YER029C FRQ1Q06389 190 aa0.47□□□□□ -2.33
SMB1YER029C YLR118CQ12354 227 aa0.47□□□□□ -2.33
SMB1YER029C SLO1Q3E784 85 aa0.47□□□□□ -2.33
SMB1YER029C YLR099W-AQ3E798 87 aa0.47□□□□□ -2.33
SMB1YER029C YNL277W-AQ3E7Z0 62 aa0.47□□□□□ -2.33
SMB1YER029C YHR213W-BQ8TGK1 99 aa0.47□□□□□ -2.33
SMB1YER029C TY1B-HO13535 1793 aa0.47□□□□□ -2.33
SMB1YER029C SPP41P38904 1435 aa0.47□□□□□ -2.33
SMB1YER029C TRM732Q03496 1420 aa0.47□□□□□ -2.33
SMB1YER029C BLM10P43583 2143 aa0.46□□□□□ -2.34
SMB1YER029C RPS1BP23248 255 aaKnown RBP0.46□□□□□ -2.34
SMB1YER029C RPS1AP33442 255 aaKnown RBP0.46□□□□□ -2.34
SMB1YER029C TDA2P40045 126 aa0.46□□□□□ -2.34
SMB1YER029C YER137CP40083 148 aaKnown RBP0.46□□□□□ -2.34
SMB1YER029C PHS1P40857 217 aa0.46□□□□□ -2.34
SMB1YER029C SFT1P43682 97 aa0.46□□□□□ -2.34
SMB1YER029C AIM11P87275 137 aa0.46□□□□□ -2.34
SMB1YER029C ARL3Q02804 198 aa0.46□□□□□ -2.34
SMB1YER029C MGR2Q02889 113 aa0.46□□□□□ -2.34
SMB1YER029C YDR278CQ05612 105 aa0.46□□□□□ -2.34
SMB1YER029C YPR153WQ06537 140 aa0.46□□□□□ -2.34
SMB1YER029C RAF1Q06891 181 aa0.46□□□□□ -2.34
SMB1YER029C NAT5Q08689 176 aa0.46□□□□□ -2.34
SMB1YER029C FCF2Q12035 217 aaPredicted RBP0.46□□□□□ -2.34
SMB1YER029C HUT1Q12520 339 aa0.46□□□□□ -2.34
SMB1YER029C MHF1Q3E835 90 aa0.46□□□□□ -2.34
SMB1YER029C KTI11Q3E840 82 aa0.46□□□□□ -2.34
SMB1YER029C YOR304C-AO14468 76 aa0.45□□□□□ -2.34
SMB1YER029C HAP2P06774 265 aa0.45□□□□□ -2.34
SMB1YER029C HAP3P13434 144 aa0.45□□□□□ -2.34
SMB1YER029C FUN14P18411 198 aa0.45□□□□□ -2.34
SMB1YER029C MRPL44P19956 98 aa0.45□□□□□ -2.34
SMB1YER029C LHP1P33399 275 aaKnown RBP0.45□□□□□ -2.34
SMB1YER029C UTP11P34247 250 aaPredicted RBP0.45□□□□□ -2.34
SMB1YER029C SFT2P38166 215 aa0.45□□□□□ -2.34
SMB1YER029C RPB11P38902 120 aa0.45□□□□□ -2.34
SMB1YER029C HSP10P38910 106 aa0.45□□□□□ -2.34
SMB1YER029C MPC1P53157 130 aaKnown RBP0.45□□□□□ -2.34
SMB1YER029C ERV14P53173 138 aa0.45□□□□□ -2.34
SMB1YER029C YPL067CQ02754 198 aa0.45□□□□□ -2.34
SMB1YER029C SEN15Q04675 128 aa0.45□□□□□ -2.34
SMB1YER029C SOM1Q05676 74 aa0.45□□□□□ -2.34
SMB1YER029C GPI11Q06636 219 aa0.45□□□□□ -2.34
SMB1YER029C LDB18Q07887 179 aa0.45□□□□□ -2.34
SMB1YER029C YOR385WQ08909 290 aa0.45□□□□□ -2.34
SMB1YER029C RTR2Q12378 196 aa0.45□□□□□ -2.34
SMB1YER029C GTT2Q12390 233 aa0.45□□□□□ -2.34
SMB1YER029C YOR376W-AQ3E805 51 aa0.45□□□□□ -2.34
SMB1YER029C SNT2P53127 1403 aa0.45□□□□□ -2.34
SMB1YER029C DNA2P38859 1522 aa0.44□□□□□ -2.34
SMB1YER029C RPL33AP05744 107 aaKnown RBP0.44□□□□□ -2.34
SMB1YER029C YGL014C-AP0C5N1 53 aa0.44□□□□□ -2.34
SMB1YER029C PAU21P0CE86 164 aa0.44□□□□□ -2.34
SMB1YER029C PAU22P0CE87 164 aa0.44□□□□□ -2.34
SMB1YER029C RPL40AP0CH08 128 aaKnown RBP0.44□□□□□ -2.34
SMB1YER029C RPL40BP0CH09 128 aaKnown RBP0.44□□□□□ -2.34
SMB1YER029C ANB1P19211 157 aa0.44□□□□□ -2.34
SMB1YER029C SEC59P20048 519 aa0.44□□□□□ -2.34
SMB1YER029C YKL044WP36092 106 aa0.44□□□□□ -2.34
SMB1YER029C QCR10P37299 77 aa0.44□□□□□ -2.34
SMB1YER029C YAR029WP39549 74 aa0.44□□□□□ -2.34
SMB1YER029C GPI19Q04082 140 aa0.44□□□□□ -2.34
SMB1YER029C YLR296WQ05898 108 aa0.44□□□□□ -2.34
SMB1YER029C YLR042CQ07990 161 aa0.44□□□□□ -2.34
SMB1YER029C YOR072WQ08486 104 aa0.44□□□□□ -2.34
SMB1YER029C YIR021W-AQ3E739 70 aa0.44□□□□□ -2.34
SMB1YER029C MED11Q99278 115 aa0.44□□□□□ -2.34
SMB1YER029C BUD4P47136 1447 aa0.44□□□□□ -2.34
SMB1YER029C TY4B-JP47024 1803 aa0.43□□□□□ -2.34
SMB1YER029C RPS22AP0C0W1 130 aaKnown RBP0.43□□□□□ -2.34
SMB1YER029C YER039C-AP0CD97 72 aa0.43□□□□□ -2.34
SMB1YER029C NMT1P14743 455 aa0.43□□□□□ -2.34
SMB1YER029C SRL3P36167 246 aa0.43□□□□□ -2.34
SMB1YER029C MRPL11P36521 249 aaPredicted RBP0.43□□□□□ -2.34
SMB1YER029C AIM18P38884 321 aa0.43□□□□□ -2.34
SMB1YER029C SNF11P38956 169 aa0.43□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 162.3 ms