RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	PEX11	Q12462	236 aa		4.62	□□□□□ -1.67
TRP1	YDR007W	MRS1	P07266	363 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	GPX1	P36014	167 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	YBR090C	P38253	122 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	PHO88	P38264	188 aa	Predicted RBP	4.61	□□□□□ -1.67
TRP1	YDR007W	YJL028W	P47062	111 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	VEL1	P53058	206 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	YMR082C	Q04276	118 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	NMA1	Q06178	401 aa	Known RBP	4.61	□□□□□ -1.67
TRP1	YDR007W	ATG40	Q99325	256 aa		4.61	□□□□□ -1.67
TRP1	YDR007W	YDR157W	A0A023PZE8	133 aa		4.6	□□□□□ -1.67
TRP1	YDR007W	YGL118C	P53132	145 aa		4.6	□□□□□ -1.67
TRP1	YDR007W	AIM34	Q03673	198 aa		4.6	□□□□□ -1.67
TRP1	YDR007W	INP1	Q03694	420 aa		4.6	□□□□□ -1.67
TRP1	YDR007W	API2	Q04413	109 aa		4.6	□□□□□ -1.67
TRP1	YDR007W	GRE1	Q08969	168 aa		4.6	□□□□□ -1.67
TRP1	YDR007W	RPS22A	P0C0W1	130 aa	Known RBP	4.59	□□□□□ -1.67
TRP1	YDR007W	SRP21	P32342	167 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	YER076C	P40049	302 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	GPI2	P46961	280 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	OST2	P46964	130 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	YPS5	P53057	165 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	YDR209C	Q03480	137 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	TMC1	Q08422	150 aa	Predicted RBP	4.59	□□□□□ -1.67
TRP1	YDR007W	YOR105W	Q08504	108 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	YPL278C	Q08990	100 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	ATO3	Q12359	275 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	YKL023C-A	Q2V2P3	75 aa		4.59	□□□□□ -1.67
TRP1	YDR007W	SMP1	P38128	452 aa		4.58	□□□□□ -1.68
TRP1	YDR007W	ARP3	P47117	449 aa	Known RBP	4.58	□□□□□ -1.68
TRP1	YDR007W	BXI1	P48558	297 aa		4.58	□□□□□ -1.68
TRP1	YDR007W	YMR090W	Q04304	227 aa	Known RBP	4.58	□□□□□ -1.68
TRP1	YDR007W	YLR296W	Q05898	108 aa		4.58	□□□□□ -1.68
TRP1	YDR007W	NAT3	Q06504	195 aa		4.58	□□□□□ -1.68
TRP1	YDR007W	KRE1	P17260	313 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	MDH2	P22133	377 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	SGE1	P33335	543 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	FRM2	P37261	193 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	MIC12	P38341	106 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	YIL059C	P40520	121 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	ALG9	P53868	555 aa	Known RBP	4.57	□□□□□ -1.68
TRP1	YDR007W	ABF2	Q02486	183 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	RAV2	Q03956	351 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	SPG3	Q04398	127 aa	Predicted RBP	4.57	□□□□□ -1.68
TRP1	YDR007W	DGA1	Q08650	418 aa		4.57	□□□□□ -1.68
TRP1	YDR007W	SMT3	Q12306	101 aa	Known RBP	4.57	□□□□□ -1.68
TRP1	YDR007W	HMRA1	P0CY11	126 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	CUP2	P15315	225 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	STE18	P18852	110 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	AHT1	P29589	182 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	NHP2	P32495	156 aa	Predicted RBP	4.56	□□□□□ -1.68
TRP1	YDR007W	ECM14	P38836	430 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	ERG28	P40030	148 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	RRT13	P40042	185 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	PGU1	P47180	361 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	BUD25	P85052	153 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	YMR244W	Q04018	355 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	YOL029C	Q08187	201 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	YPR011C	Q12251	326 aa		4.56	□□□□□ -1.68
TRP1	YDR007W	YAL064W-B	O13512	126 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	YER039C-A	P0CD97	72 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	QCR9	P22289	66 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	SPO13	P23624	291 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	RFA3	P26755	122 aa	Known RBP	4.55	□□□□□ -1.68
TRP1	YDR007W	SHB17	P36136	271 aa	Known RBP	4.55	□□□□□ -1.68
TRP1	YDR007W	CYB5	P40312	120 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	YFR045W	P43617	309 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	AIM11	P87275	137 aa		4.55	□□□□□ -1.68
TRP1	YDR007W	MRS4	P23500	304 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	IMP1	P28627	190 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	QRI5	P32344	111 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	AGA2	P32781	87 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	VMA11	P32842	164 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	RPB7	P34087	171 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	YGP1	P38616	354 aa	Known RBP	4.54	□□□□□ -1.68
TRP1	YDR007W	ECM34	P38728	170 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	SBH1	P52870	82 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	YLR152C	P54072	576 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	HAL1	Q01766	294 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	VPS71	Q03433	280 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	YDL180W	Q12301	547 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	KTI11	Q3E840	82 aa		4.54	□□□□□ -1.68
TRP1	YDR007W	MSB2	P32334	1306 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	UBC5	P15732	148 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	CPT1	P17898	393 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	RPA12	P32529	125 aa	Known RBP	4.53	□□□□□ -1.68
TRP1	YDR007W	YAR068W	P39564	161 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	APQ12	P40532	138 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	GEP7	P53171	287 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	LPP1	Q04396	274 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	UPS1	Q05776	175 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	ARC18	Q05933	178 aa	Known RBP	4.53	□□□□□ -1.68
TRP1	YDR007W	USB1	Q12208	290 aa	Known RBP	4.53	□□□□□ -1.68
TRP1	YDR007W	SCS22	Q6Q595	175 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	YAL067W-A	Q8TGK6	75 aa		4.53	□□□□□ -1.68
TRP1	YDR007W	YMR316C-A	I2HB70	103 aa		4.52	□□□□□ -1.69
TRP1	YDR007W	ECM12	O13529	151 aa		4.52	□□□□□ -1.69
TRP1	YDR007W	SOD1	P00445	154 aa	Known RBP	4.52	□□□□□ -1.69
TRP1	YDR007W	YKL044W	P36092	106 aa		4.52	□□□□□ -1.69
TRP1	YDR007W	TRM7	P38238	310 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms