RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C PAC10P48363 199 aa1.31□□□□□ -2.2
RRI1YDL216C PLP1Q04004 230 aa1.31□□□□□ -2.2
RRI1YDL216C PEX11Q12462 236 aa1.31□□□□□ -2.2
RRI1YDL216C YAR064WP39563 99 aa1.3□□□□□ -2.2
RRI1YDL216C YEL073CP39974 107 aa1.3□□□□□ -2.2
RRI1YDL216C SOL1P50278 321 aa1.3□□□□□ -2.2
RRI1YDL216C CCW12Q12127 133 aa1.3□□□□□ -2.2
RRI1YDL216C PEX34P25584 144 aa1.29□□□□□ -2.2
RRI1YDL216C SRX1P36077 127 aa1.29□□□□□ -2.2
RRI1YDL216C YJR015WP47090 510 aa1.29□□□□□ -2.2
RRI1YDL216C NQM1P53228 333 aaPredicted RBP1.29□□□□□ -2.2
RRI1YDL216C YML079WQ03629 201 aa1.29□□□□□ -2.2
RRI1YDL216C YIL046W-AQ3E7Z4 54 aa1.29□□□□□ -2.2
RRI1YDL216C SAC3P46674 1301 aa1.29□□□□□ -2.2
RRI1YDL216C YKR070WP36151 352 aaKnown RBP1.28□□□□□ -2.2
RRI1YDL216C EGD2P38879 174 aaKnown RBP1.28□□□□□ -2.2
RRI1YDL216C YGL230CP53074 147 aa1.28□□□□□ -2.2
RRI1YDL216C HRD1Q08109 551 aa1.28□□□□□ -2.2
RRI1YDL216C YOR097CQ12274 175 aaPredicted RBP1.28□□□□□ -2.2
RRI1YDL216C FMP49A0A023PZB3 126 aa1.27□□□□□ -2.21
RRI1YDL216C PRE1P22141 198 aaKnown RBP1.27□□□□□ -2.21
RRI1YDL216C SHB17P36136 271 aaKnown RBP1.27□□□□□ -2.21
RRI1YDL216C GRE1Q08969 168 aa1.27□□□□□ -2.21
RRI1YDL216C YDL157CQ12082 118 aa1.27□□□□□ -2.21
RRI1YDL216C YLR050CQ12155 161 aaKnown RBP1.27□□□□□ -2.21
RRI1YDL216C STT4P37297 1900 aa1.26□□□□□ -2.21
RRI1YDL216C RAD51P25454 400 aa1.26□□□□□ -2.21
RRI1YDL216C SRP14P38985 146 aa1.25□□□□□ -2.21
RRI1YDL216C YGR269WP40326 108 aa1.25□□□□□ -2.21
RRI1YDL216C YIP3P53633 176 aa1.25□□□□□ -2.21
RRI1YDL216C SYM1Q06563 197 aa1.25□□□□□ -2.21
RRI1YDL216C YDC1Q02896 317 aa1.24□□□□□ -2.21
RRI1YDL216C ATG38Q05789 226 aaKnown RBP1.24□□□□□ -2.21
RRI1YDL216C KEI1Q06346 221 aa1.24□□□□□ -2.21
RRI1YDL216C SPS2P08459 502 aa1.23□□□□□ -2.21
RRI1YDL216C YEL028WP39989 153 aa1.23□□□□□ -2.21
RRI1YDL216C AVO2Q04749 426 aa1.23□□□□□ -2.21
RRI1YDL216C CMD1P06787 147 aaKnown RBP1.22□□□□□ -2.21
RRI1YDL216C RPS25BP0C0T4 108 aaKnown RBP1.22□□□□□ -2.21
RRI1YDL216C LIP1Q03579 150 aa1.22□□□□□ -2.21
RRI1YDL216C RPS25AQ3E792 108 aaPredicted RBP1.22□□□□□ -2.21
RRI1YDL216C THI74Q04083 370 aa1.21□□□□□ -2.22
RRI1YDL216C KIN28P06242 306 aa1.19□□□□□ -2.22
RRI1YDL216C CSH1P38287 376 aa1.19□□□□□ -2.22
RRI1YDL216C APS3P47064 194 aa1.19□□□□□ -2.22
RRI1YDL216C TMA23Q03525 211 aa1.19□□□□□ -2.22
RRI1YDL216C ATG10Q07879 167 aa1.19□□□□□ -2.22
RRI1YDL216C UIP4Q08926 304 aa1.19□□□□□ -2.22
RRI1YDL216C FCY1Q12178 158 aa1.19□□□□□ -2.22
RRI1YDL216C URA2P07259 2214 aaKnown RBP1.19□□□□□ -2.22
RRI1YDL216C HAP2P06774 265 aa1.18□□□□□ -2.22
RRI1YDL216C CDC39P25655 2108 aaKnown RBP1.18□□□□□ -2.22
RRI1YDL216C UBC6P33296 250 aaPredicted RBP1.18□□□□□ -2.22
RRI1YDL216C SRP102P36057 244 aaPredicted RBP1.18□□□□□ -2.22
RRI1YDL216C GEP7P53171 287 aa1.18□□□□□ -2.22
RRI1YDL216C YNL140CP53910 189 aa1.18□□□□□ -2.22
RRI1YDL216C HSK3P69852 69 aa1.18□□□□□ -2.22
RRI1YDL216C TMA20P89886 181 aaPredicted RBP1.18□□□□□ -2.22
RRI1YDL216C RPL35AP0CX84 120 aaKnown RBP1.17□□□□□ -2.22
RRI1YDL216C RPL35BP0CX85 120 aaKnown RBP1.17□□□□□ -2.22
RRI1YDL216C PTC1P35182 281 aa1.17□□□□□ -2.22
RRI1YDL216C INO4P13902 151 aa1.16□□□□□ -2.22
RRI1YDL216C PHB1P40961 287 aa1.16□□□□□ -2.22
RRI1YDL216C YCR001WP25347 104 aa1.15□□□□□ -2.23
RRI1YDL216C VPS51P36116 164 aa1.15□□□□□ -2.23
RRI1YDL216C CIN5P40917 295 aa1.15□□□□□ -2.23
RRI1YDL216C GLC8P41818 229 aa1.15□□□□□ -2.23
RRI1YDL216C YPR114WQ06107 315 aa1.15□□□□□ -2.23
RRI1YDL216C SPT14P32363 452 aa1.14□□□□□ -2.23
RRI1YDL216C YPT31P38555 223 aaKnown RBP1.14□□□□□ -2.23
RRI1YDL216C YDL241WQ07738 123 aa1.14□□□□□ -2.23
RRI1YDL216C VAM10Q08474 114 aa1.14□□□□□ -2.23
RRI1YDL216C YOL013W-AP0C272 63 aaPredicted RBP1.13□□□□□ -2.23
RRI1YDL216C RME1P32338 300 aaKnown RBP1.13□□□□□ -2.23
RRI1YDL216C YNR064CP53750 290 aa1.13□□□□□ -2.23
RRI1YDL216C YGL101WP53144 215 aa1.12□□□□□ -2.23
RRI1YDL216C YDR102CQ03864 110 aa1.12□□□□□ -2.23
RRI1YDL216C GIM5Q04493 163 aa1.12□□□□□ -2.23
RRI1YDL216C UBR1P19812 1950 aa1.11□□□□□ -2.23
RRI1YDL216C BLM10P43583 2143 aa1.11□□□□□ -2.23
RRI1YDL216C ATP5P09457 212 aa1.11□□□□□ -2.23
RRI1YDL216C BPH1P25356 2167 aa1.11□□□□□ -2.23
RRI1YDL216C YBR027CP38220 110 aa1.1□□□□□ -2.23
RRI1YDL216C YEL014CP39999 101 aa1.1□□□□□ -2.23
RRI1YDL216C EMC4P53073 190 aa1.1□□□□□ -2.23
RRI1YDL216C YLR046CQ12253 270 aa1.1□□□□□ -2.23
RRI1YDL216C RAD50P12753 1312 aa1.09□□□□□ -2.23
RRI1YDL216C CCW14O13547 238 aa1.09□□□□□ -2.24
RRI1YDL216C ECM31P38122 312 aa1.09□□□□□ -2.24
RRI1YDL216C HTD2P38790 280 aaKnown RBP1.08□□□□□ -2.24
RRI1YDL216C CCC1P47818 322 aa1.08□□□□□ -2.24
RRI1YDL216C SMD2Q06217 110 aaKnown RBP1.08□□□□□ -2.24
RRI1YDL216C YLR053CQ12026 108 aa1.08□□□□□ -2.24
RRI1YDL216C RDI1Q12434 202 aa1.08□□□□□ -2.24
RRI1YDL216C YHR213W-BQ8TGK1 99 aa1.08□□□□□ -2.24
RRI1YDL216C LSM3P57743 89 aaKnown RBP1.07□□□□□ -2.24
RRI1YDL216C MAK3Q03503 176 aa1.07□□□□□ -2.24
RRI1YDL216C CMC4Q3E7A9 73 aa1.07□□□□□ -2.24
RRI1YDL216C Q0297Q9ZZV8 51 aa1.07□□□□□ -2.24
RRI1YDL216C FES1P38260 290 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms