RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA1YDL185W DUO1P53168 247 aaKnown RBP3.31□□□□□ -1.88
VMA1YDL185W FIT2Q08906 153 aa3.31□□□□□ -1.88
VMA1YDL185W USB1Q12208 290 aaKnown RBP3.31□□□□□ -1.88
VMA1YDL185W YAL064W-BO13512 126 aa3.3□□□□□ -1.88
VMA1YDL185W ARF1P11076 181 aaKnown RBP3.3□□□□□ -1.88
VMA1YDL185W ROX3P25046 220 aa3.3□□□□□ -1.88
VMA1YDL185W SPC29P33419 253 aa3.3□□□□□ -1.88
VMA1YDL185W APS1P35181 156 aa3.3□□□□□ -1.88
VMA1YDL185W RPS27AP35997 82 aaKnown RBP3.3□□□□□ -1.88
VMA1YDL185W RPS27BP38711 82 aa3.3□□□□□ -1.88
VMA1YDL185W FCY1Q12178 158 aa3.3□□□□□ -1.88
VMA1YDL185W NAG1Q8TGN9 163 aa3.3□□□□□ -1.88
VMA1YDL185W YSF3P0C074 85 aaPredicted RBP3.3□□□□□ -1.88
VMA1YDL185W MRPL20P22354 195 aaPredicted RBP3.3□□□□□ -1.88
VMA1YDL185W REC104P33323 182 aa3.3□□□□□ -1.88
VMA1YDL185W YJL193WP39542 402 aa3.3□□□□□ -1.88
VMA1YDL185W YER076CP40049 302 aa3.3□□□□□ -1.88
VMA1YDL185W YLR460CP54007 376 aa3.3□□□□□ -1.88
VMA1YDL185W TRS23Q03784 219 aa3.3□□□□□ -1.88
VMA1YDL185W HPA2Q06592 156 aa3.3□□□□□ -1.88
VMA1YDL185W YDL022C-AP0C5L6 82 aa3.29□□□□□ -1.88
VMA1YDL185W RPA12P32529 125 aaKnown RBP3.29□□□□□ -1.88
VMA1YDL185W YKR032WP36127 104 aa3.29□□□□□ -1.88
VMA1YDL185W YER181CP40097 107 aa3.29□□□□□ -1.88
VMA1YDL185W SDH7Q04401 133 aa3.29□□□□□ -1.88
VMA1YDL185W YMR103CQ04436 120 aa3.29□□□□□ -1.88
VMA1YDL185W LIP2Q06005 328 aa3.29□□□□□ -1.88
VMA1YDL185W RAF1Q06891 181 aa3.29□□□□□ -1.88
VMA1YDL185W RDL2Q08742 149 aaKnown RBP3.29□□□□□ -1.88
VMA1YDL185W NCE102Q12207 173 aaRIP-Chip data3.29□□□□□ -1.88not detected
VMA1YDL185W YGL258W-AQ3E740 77 aa3.29□□□□□ -1.88
VMA1YDL185W MRP10O75012 95 aa3.29□□□□□ -1.88
VMA1YDL185W IMP1P28627 190 aa3.29□□□□□ -1.88
VMA1YDL185W PAU7P39545 55 aa3.29□□□□□ -1.88
VMA1YDL185W YNR077CP53758 84 aa3.29□□□□□ -1.88
VMA1YDL185W MRPL24P36525 258 aaPredicted RBP3.29□□□□□ -1.88
VMA1YDL185W YFR057WP43625 151 aa3.29□□□□□ -1.88
VMA1YDL185W YGR039WP53225 103 aa3.29□□□□□ -1.88
VMA1YDL185W YMR254CQ04838 102 aa3.29□□□□□ -1.88
VMA1YDL185W NIP7Q08962 181 aaKnown RBP3.29□□□□□ -1.88
VMA1YDL185W GLT1Q12680 2145 aaKnown RBP3.28□□□□□ -1.88
VMA1YDL185W PIS1P06197 220 aaKnown RBP3.28□□□□□ -1.88
VMA1YDL185W IMG2P25642 146 aaPredicted RBP3.28□□□□□ -1.88
VMA1YDL185W MRPS5P33759 307 aa3.28□□□□□ -1.88
VMA1YDL185W OXA1P39952 402 aa3.28□□□□□ -1.88
VMA1YDL185W SHR5P41912 237 aa3.28□□□□□ -1.88
VMA1YDL185W YDL186WP48568 277 aa3.28□□□□□ -1.88
VMA1YDL185W YLR112WQ12130 139 aa3.28□□□□□ -1.88
VMA1YDL185W RFM1Q12192 310 aa3.28□□□□□ -1.88
VMA1YDL185W YLR415CO13578 112 aa3.28□□□□□ -1.88
VMA1YDL185W FPR1P20081 114 aaKnown RBP3.28□□□□□ -1.88
VMA1YDL185W HSP12P22943 109 aaKnown RBP3.28□□□□□ -1.88
VMA1YDL185W OSW5P40219 148 aa3.28□□□□□ -1.88
VMA1YDL185W UBC13P52490 153 aa3.28□□□□□ -1.88
VMA1YDL185W YDR119W-AQ2V2P9 66 aa3.28□□□□□ -1.88
VMA1YDL185W VPS63O13549 108 aa3.27□□□□□ -1.89
VMA1YDL185W BNA1P47096 177 aa3.27□□□□□ -1.89
VMA1YDL185W SBH2P52871 88 aa3.27□□□□□ -1.89
VMA1YDL185W PCP1P53259 346 aa3.27□□□□□ -1.89
VMA1YDL185W SEC16P48415 2195 aaKnown RBP3.27□□□□□ -1.89
VMA1YDL185W BLM10P43583 2143 aa3.27□□□□□ -1.89
VMA1YDL185W GPI18P38211 433 aa3.27□□□□□ -1.89
VMA1YDL185W CWP2P43497 92 aa3.27□□□□□ -1.89
VMA1YDL185W PRY1P47032 299 aa3.27□□□□□ -1.89
VMA1YDL185W ATG21Q02887 496 aa3.27□□□□□ -1.89
VMA1YDL185W YTH1Q06102 208 aaPredicted RBP3.27□□□□□ -1.89
VMA1YDL185W YOR097CQ12274 175 aaPredicted RBP3.27□□□□□ -1.89
VMA1YDL185W YFL041W-AQ3E817 63 aa3.27□□□□□ -1.89
VMA1YDL185W YER039C-AP0CD97 72 aa3.27□□□□□ -1.89
VMA1YDL185W NCE103P53615 221 aa3.27□□□□□ -1.89
VMA1YDL185W BRR2P32639 2163 aaKnown RBP3.27□□□□□ -1.89
VMA1YDL185W YMR31P19955 123 aa3.26□□□□□ -1.89
VMA1YDL185W FPR2P32472 135 aa3.26□□□□□ -1.89
VMA1YDL185W YMR141CP40211 102 aa3.26□□□□□ -1.89
VMA1YDL185W OST1P41543 476 aaKnown RBP3.26□□□□□ -1.89
VMA1YDL185W TDA7P53882 636 aaPredicted RBP3.26□□□□□ -1.89
VMA1YDL185W MIX14Q04341 121 aa3.26□□□□□ -1.89
VMA1YDL185W LSM6Q06406 86 aaKnown RBP3.26□□□□□ -1.89
VMA1YDL185W ACC1Q00955 2233 aaKnown RBP3.26□□□□□ -1.89
VMA1YDL185W VMA11P32842 164 aa3.26□□□□□ -1.89
VMA1YDL185W MID2P36027 376 aa3.26□□□□□ -1.89
VMA1YDL185W HST4P53688 370 aa3.26□□□□□ -1.89
VMA1YDL185W MOT3P54785 490 aaKnown RBP3.26□□□□□ -1.89
VMA1YDL185W YMR317WQ04893 1140 aa3.26□□□□□ -1.89
VMA1YDL185W ENV10Q99382 181 aa3.26□□□□□ -1.89
VMA1YDL185W RPS16AP0CX51 143 aaKnown RBP3.25□□□□□ -1.89
VMA1YDL185W RPS16BP0CX52 143 aaKnown RBP3.25□□□□□ -1.89
VMA1YDL185W YCR022CP25620 114 aa3.25□□□□□ -1.89
VMA1YDL185W RRG8Q06109 277 aa3.25□□□□□ -1.89
VMA1YDL185W NRG2P38082 220 aa3.25□□□□□ -1.89
VMA1YDL185W VTC1P40046 129 aaRIP-Chip data3.25□□□□□ -1.89not detected
VMA1YDL185W NCA3P46955 337 aa3.25□□□□□ -1.89
VMA1YDL185W CIS3P47001 227 aa3.25□□□□□ -1.89
VMA1YDL185W UBC7Q02159 165 aa3.25□□□□□ -1.89
VMA1YDL185W MGR2Q02889 113 aa3.25□□□□□ -1.89
VMA1YDL185W UPS1Q05776 175 aa3.25□□□□□ -1.89
VMA1YDL185W AQY1P0CD91 305 aa3.25□□□□□ -1.89
VMA1YDL185W YCR085WP25650 117 aa3.25□□□□□ -1.89
VMA1YDL185W ECO1P43605 281 aa3.25□□□□□ -1.89
VMA1YDL185W VPS55P47111 140 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms