RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C YCR025CP25352 136 aa3.72□□□□□ -1.81
CDC48YDL126C HSP150P32478 413 aa3.72□□□□□ -1.81
CDC48YDL126C RIM9Q04734 239 aa3.72□□□□□ -1.81
CDC48YDL126C YOR376WQ08900 122 aa3.72□□□□□ -1.81
CDC48YDL126C INO4P13902 151 aa3.72□□□□□ -1.81
CDC48YDL126C YNL208WP40159 199 aaKnown RBP3.72□□□□□ -1.81
CDC48YDL126C YNL198CP40166 100 aa3.72□□□□□ -1.81
CDC48YDL126C HST4P53688 370 aa3.72□□□□□ -1.81
CDC48YDL126C CSI2Q08054 341 aa3.72□□□□□ -1.81
CDC48YDL126C YOL024WQ08172 172 aa3.72□□□□□ -1.81
CDC48YDL126C DGA1Q08650 418 aa3.72□□□□□ -1.81
CDC48YDL126C ADH1P00330 348 aaKnown RBP3.71□□□□□ -1.82
CDC48YDL126C GLE2P40066 365 aa3.71□□□□□ -1.82
CDC48YDL126C YFR054CP43622 192 aa3.71□□□□□ -1.82
CDC48YDL126C ATP23P53722 227 aa3.71□□□□□ -1.82
CDC48YDL126C SRP21P32342 167 aa3.71□□□□□ -1.82
CDC48YDL126C YCR041WP37265 110 aa3.71□□□□□ -1.82
CDC48YDL126C PTH1P38876 190 aaKnown RBP3.71□□□□□ -1.82
CDC48YDL126C YFL065CP43539 102 aa3.71□□□□□ -1.82
CDC48YDL126C CAB4P53332 305 aa3.71□□□□□ -1.82
CDC48YDL126C YNL046WP53956 172 aa3.71□□□□□ -1.82
CDC48YDL126C YMR082CQ04276 118 aa3.71□□□□□ -1.82
CDC48YDL126C IRC19Q07843 230 aa3.71□□□□□ -1.82
CDC48YDL126C YPR203WQ08994 102 aa3.71□□□□□ -1.82
CDC48YDL126C YOR343CQ12484 108 aa3.71□□□□□ -1.82
CDC48YDL126C RPS22AP0C0W1 130 aaKnown RBP3.7□□□□□ -1.82
CDC48YDL126C MRS3P10566 314 aa3.7□□□□□ -1.82
CDC48YDL126C CSH1P38287 376 aa3.7□□□□□ -1.82
CDC48YDL126C LCB3P47013 409 aa3.7□□□□□ -1.82
CDC48YDL126C YGR219WP53307 113 aa3.7□□□□□ -1.82
CDC48YDL126C PAU4P53427 120 aa3.7□□□□□ -1.82
CDC48YDL126C YDR209CQ03480 137 aa3.7□□□□□ -1.82
CDC48YDL126C YIL046W-AQ3E7Z4 54 aa3.7□□□□□ -1.82
CDC48YDL126C SEC11P15367 167 aa3.7□□□□□ -1.82
CDC48YDL126C VMA11P32842 164 aa3.7□□□□□ -1.82
CDC48YDL126C PEX17P40155 199 aa3.7□□□□□ -1.82
CDC48YDL126C GPI2P46961 280 aa3.7□□□□□ -1.82
CDC48YDL126C PAU1P0CE88 120 aa3.69□□□□□ -1.82
CDC48YDL126C PAU14P0CE89 120 aa3.69□□□□□ -1.82
CDC48YDL126C PAU6P0CE90 120 aa3.69□□□□□ -1.82
CDC48YDL126C PAU18P0CE91 120 aa3.69□□□□□ -1.82
CDC48YDL126C PAU8P0CE92 120 aa3.69□□□□□ -1.82
CDC48YDL126C PAU11P0CE93 120 aa3.69□□□□□ -1.82
CDC48YDL126C YCR085WP25650 117 aa3.69□□□□□ -1.82
CDC48YDL126C PAU13P38725 120 aa3.69□□□□□ -1.82
CDC48YDL126C PAU10Q03050 120 aa3.69□□□□□ -1.82
CDC48YDL126C BET5Q03630 159 aa3.69□□□□□ -1.82
CDC48YDL126C SYM1Q06563 197 aa3.69□□□□□ -1.82
CDC48YDL126C YLR042CQ07990 161 aa3.69□□□□□ -1.82
CDC48YDL126C PAU20Q08322 120 aa3.69□□□□□ -1.82
CDC48YDL126C YDL180WQ12301 547 aa3.69□□□□□ -1.82
CDC48YDL126C PAU9Q3E770 120 aa3.69□□□□□ -1.82
CDC48YDL126C YFL041W-AQ3E817 63 aa3.69□□□□□ -1.82
CDC48YDL126C ECM12O13529 151 aa3.69□□□□□ -1.82
CDC48YDL126C RPL2AP0CX45 254 aaKnown RBP3.69□□□□□ -1.82
CDC48YDL126C RPL2BP0CX46 254 aaKnown RBP3.69□□□□□ -1.82
CDC48YDL126C CDC43P18898 376 aa3.69□□□□□ -1.82
CDC48YDL126C ERG24P32462 438 aaKnown RBP3.69□□□□□ -1.82
CDC48YDL126C SHB17P36136 271 aaKnown RBP3.69□□□□□ -1.82
CDC48YDL126C PEX22P39718 180 aa3.69□□□□□ -1.82
CDC48YDL126C YIL059CP40520 121 aa3.69□□□□□ -1.82
CDC48YDL126C YGL118CP53132 145 aa3.69□□□□□ -1.82
CDC48YDL126C ALG9P53868 555 aaKnown RBP3.69□□□□□ -1.82
CDC48YDL126C FCF1Q05498 189 aaPredicted RBP3.69□□□□□ -1.82
CDC48YDL126C NMA1Q06178 401 aaKnown RBP3.69□□□□□ -1.82
CDC48YDL126C RPL16BP26785 198 aaKnown RBP3.68□□□□□ -1.82
CDC48YDL126C TOM6P33448 61 aa3.68□□□□□ -1.82
CDC48YDL126C YKL044WP36092 106 aa3.68□□□□□ -1.82
CDC48YDL126C TEM1P38987 245 aa3.68□□□□□ -1.82
CDC48YDL126C MST28P39552 234 aa3.68□□□□□ -1.82
CDC48YDL126C OST2P46964 130 aa3.68□□□□□ -1.82
CDC48YDL126C YLR146W-AQ2V2P1 62 aa3.68□□□□□ -1.82
CDC48YDL126C ODC2Q99297 307 aa3.68□□□□□ -1.82
CDC48YDL126C POL2P21951 2222 aaKnown RBP3.68□□□□□ -1.82
CDC48YDL126C RPL42AP0CX27 106 aaKnown RBP3.68□□□□□ -1.82
CDC48YDL126C RPL42BP0CX28 106 aaKnown RBP3.68□□□□□ -1.82
CDC48YDL126C GON7P46984 123 aa3.68□□□□□ -1.82
CDC48YDL126C PGU1P47180 361 aa3.68□□□□□ -1.82
CDC48YDL126C CAX4P53223 239 aa3.68□□□□□ -1.82
CDC48YDL126C MRX11Q03079 207 aa3.68□□□□□ -1.82
CDC48YDL126C SHH4Q06236 168 aa3.68□□□□□ -1.82
CDC48YDL126C YAL064W-BO13512 126 aa3.67□□□□□ -1.82
CDC48YDL126C YHR214C-DP0CX93 97 aa3.67□□□□□ -1.82
CDC48YDL126C MIG1P27705 504 aa3.67□□□□□ -1.82
CDC48YDL126C NRG2P38082 220 aa3.67□□□□□ -1.82
CDC48YDL126C WSC2P53832 503 aa3.67□□□□□ -1.82
CDC48YDL126C YNL234WP53857 426 aa3.67□□□□□ -1.82
CDC48YDL126C COF1Q03048 143 aaKnown RBP3.67□□□□□ -1.82
CDC48YDL126C YPL039WQ03080 316 aa3.67□□□□□ -1.82
CDC48YDL126C NAT3Q06504 195 aa3.67□□□□□ -1.82
CDC48YDL126C HMRA1P0CY11 126 aa3.67□□□□□ -1.82
CDC48YDL126C CYB5P40312 120 aa3.67□□□□□ -1.82
CDC48YDL126C NIP7Q08962 181 aaKnown RBP3.67□□□□□ -1.82
CDC48YDL126C YNL277W-AQ3E7Z0 62 aa3.67□□□□□ -1.82
CDC48YDL126C YOR032W-AQ8TGS1 66 aa3.67□□□□□ -1.82
CDC48YDL126C FAS1P07149 2051 aaKnown RBP3.66□□□□□ -1.82
CDC48YDL126C URA5P13298 226 aaKnown RBP3.66□□□□□ -1.82
CDC48YDL126C MDH2P22133 377 aa3.66□□□□□ -1.82
CDC48YDL126C MRPL20P22354 195 aaPredicted RBP3.66□□□□□ -1.82
CDC48YDL126C NHP2P32495 156 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms