RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	ENV10	Q99382	181 aa		5.09	□□□□□ -1.59
RSA4	YCR072C	CUP9	P41817	306 aa		5.08	□□□□□ -1.6
RSA4	YCR072C	WSC2	P53832	503 aa		5.08	□□□□□ -1.6
RSA4	YCR072C	ABF2	Q02486	183 aa		5.08	□□□□□ -1.6
RSA4	YCR072C	MPD1	Q12404	318 aa	Known RBP	5.08	□□□□□ -1.6
RSA4	YCR072C	YDR119W-A	Q2V2P9	66 aa		5.08	□□□□□ -1.6
RSA4	YCR072C	YLR365W	Q7LIF2	110 aa		5.08	□□□□□ -1.6
RSA4	YCR072C	ECM12	O13529	151 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	PHO85	P17157	305 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	REC114	P32841	428 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	MID2	P36027	376 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	SRX1	P36077	127 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	YKR041W	P36134	250 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	YER181C	P40097	107 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	SDS23	P53172	527 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	USV1	Q12132	391 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	FRM2	P37261	193 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	SBH1	P52870	82 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	FCF1	Q05498	189 aa	Predicted RBP	5.07	□□□□□ -1.6
RSA4	YCR072C	RFM1	Q12192	310 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	YPR108W-A	Q3E7B3	70 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	HUG1	Q6Q5K6	68 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	HTL1	Q9URQ5	78 aa		5.07	□□□□□ -1.6
RSA4	YCR072C	RPL23A	P0CX41	137 aa	Known RBP	5.06	□□□□□ -1.6
RSA4	YCR072C	RPL23B	P0CX42	137 aa	Known RBP	5.06	□□□□□ -1.6
RSA4	YCR072C	YMR31	P19955	123 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	MXR2	P25566	168 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	INO2	P26798	304 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	ALG13	P53178	202 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	CAX4	P53223	239 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	PET191	Q02772	108 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	PIR1	Q03178	341 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	FIT3	Q08907	204 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	YDR029W	Q12111	104 aa		5.06	□□□□□ -1.6
RSA4	YCR072C	APS1	P35181	156 aa		5.05	□□□□□ -1.6
RSA4	YCR072C	YPL073C	P40323	161 aa		5.05	□□□□□ -1.6
RSA4	YCR072C	AIM11	P87275	137 aa		5.05	□□□□□ -1.6
RSA4	YCR072C	MRX11	Q03079	207 aa		5.05	□□□□□ -1.6
RSA4	YCR072C	UPS1	Q05776	175 aa		5.05	□□□□□ -1.6
RSA4	YCR072C	RDL2	Q08742	149 aa	Known RBP	5.05	□□□□□ -1.6
RSA4	YCR072C	FUB1	P25659	250 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	MRPS5	P33759	307 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	YER079W	P40052	210 aa	Known RBP	5.04	□□□□□ -1.6
RSA4	YCR072C	LCB3	P47013	409 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	DSK2	P48510	373 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	UBC11	P52492	156 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	COX12	Q01519	83 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	YIL014C-A	Q02598	104 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	YOR292C	Q08743	309 aa		5.04	□□□□□ -1.6
RSA4	YCR072C	DFM1	Q12743	341 aa	Known RBP	5.04	□□□□□ -1.6
RSA4	YCR072C	IES6	P32617	166 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	YKL097C	P34245	136 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	KNH1	P50112	268 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	ATP19	P81451	68 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	MCH4	Q08268	501 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	MSA1	Q08471	629 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	YOR387C	Q08910	206 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	KTI11	Q3E840	82 aa		5.03	□□□□□ -1.6
RSA4	YCR072C	YMR316C-A	I2HB70	103 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	MDM10	P18409	493 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	YPI1	P43587	155 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	GON7	P46984	123 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	YOR186W	Q08560	144 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	TIM18	Q08749	192 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	FCY1	Q12178	158 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	YGR050C	P53231	118 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	COF1	Q03048	143 aa	Known RBP	5.02	□□□□□ -1.61
RSA4	YCR072C	YDR042C	Q03205	200 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	PBP4	Q07362	185 aa	Known RBP	5.02	□□□□□ -1.61
RSA4	YCR072C	IRC25	Q07951	179 aa		5.02	□□□□□ -1.61
RSA4	YCR072C	SFT2	P38166	215 aa		5.01	□□□□□ -1.61
RSA4	YCR072C	CSH1	P38287	376 aa		5.01	□□□□□ -1.61
RSA4	YCR072C	TRS23	Q03784	219 aa		5.01	□□□□□ -1.61
RSA4	YCR072C	RAF1	Q06891	181 aa		5.01	□□□□□ -1.61
RSA4	YCR072C	RPL20A	P0CX23	172 aa	Known RBP	5	□□□□□ -1.61
RSA4	YCR072C	RPL20B	P0CX24	172 aa	Predicted RBP	5	□□□□□ -1.61
RSA4	YCR072C	RPB8	P20436	146 aa		5	□□□□□ -1.61
RSA4	YCR072C	RPS2	P25443	254 aa	Known RBP	5	□□□□□ -1.61
RSA4	YCR072C	KTI12	P34253	313 aa	Known RBP	5	□□□□□ -1.61
RSA4	YCR072C	YFR057W	P43625	151 aa		5	□□□□□ -1.61
RSA4	YCR072C	HST4	P53688	370 aa		5	□□□□□ -1.61
RSA4	YCR072C	LSM6	Q06406	86 aa	Known RBP	5	□□□□□ -1.61
RSA4	YCR072C	MIM1	Q08176	113 aa		5	□□□□□ -1.61
RSA4	YCR072C	YOR097C	Q12274	175 aa	Predicted RBP	5	□□□□□ -1.61
RSA4	YCR072C	YPS3	Q12303	508 aa		5	□□□□□ -1.61
RSA4	YCR072C	YCL021W-A	Q96VH3	125 aa		5	□□□□□ -1.61
RSA4	YCR072C	TOM6	P33448	61 aa		4.99	□□□□□ -1.61
RSA4	YCR072C	YHL042W	P38729	150 aa		4.99	□□□□□ -1.61
RSA4	YCR072C	YHR173C	P38864	112 aa		4.99	□□□□□ -1.61
RSA4	YCR072C	MRPL49	P40858	161 aa	Predicted RBP	4.99	□□□□□ -1.61
RSA4	YCR072C	SKI6	P46948	246 aa	Predicted RBP	4.99	□□□□□ -1.61
RSA4	YCR072C	NRG2	P38082	220 aa		4.98	□□□□□ -1.61
RSA4	YCR072C	YHR140W	P38842	239 aa		4.98	□□□□□ -1.61
RSA4	YCR072C	YHR180W	P38868	163 aa		4.98	□□□□□ -1.61
RSA4	YCR072C	PAU7	P39545	55 aa		4.98	□□□□□ -1.61
RSA4	YCR072C	LST8	P41318	303 aa		4.98	□□□□□ -1.61
RSA4	YCR072C	VEL1	P53058	206 aa		4.98	□□□□□ -1.61
RSA4	YCR072C	YER145C-A	A0A023PYF4	145 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	MRPL31	P14063	131 aa	Predicted RBP	4.97	□□□□□ -1.61
RSA4	YCR072C	ARF2	P19146	181 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms