RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A HSK3P69852 69 aa2.37□□□□□ -2.03
RIM1YCR028C-A YML079WQ03629 201 aa2.37□□□□□ -2.03
RIM1YCR028C-A LPP1Q04396 274 aa2.37□□□□□ -2.03
RIM1YCR028C-A GIM5Q04493 163 aa2.37□□□□□ -2.03
RIM1YCR028C-A YPR195CQ06594 109 aa2.37□□□□□ -2.03
RIM1YCR028C-A YDL180WQ12301 547 aa2.37□□□□□ -2.03
RIM1YCR028C-A YOR192C-CQ3E736 78 aa2.37□□□□□ -2.03
RIM1YCR028C-A BOL1Q3E793 110 aa2.37□□□□□ -2.03
RIM1YCR028C-A RPL35AP0CX84 120 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A RPL35BP0CX85 120 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A PRE1P22141 198 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A TOM40P23644 387 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A ROX3P25046 220 aa2.36□□□□□ -2.03
RIM1YCR028C-A QRI5P32344 111 aa2.36□□□□□ -2.03
RIM1YCR028C-A MRP49P32388 137 aa2.36□□□□□ -2.03
RIM1YCR028C-A RAD23P32628 398 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A MRPL39P36533 70 aa2.36□□□□□ -2.03
RIM1YCR028C-A RPF1P38805 295 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A SRP14P38985 146 aa2.36□□□□□ -2.03
RIM1YCR028C-A YER134CP40081 178 aa2.36□□□□□ -2.03
RIM1YCR028C-A CIN5P40917 295 aa2.36□□□□□ -2.03
RIM1YCR028C-A TDA4P47153 279 aa2.36□□□□□ -2.03
RIM1YCR028C-A DSK2P48510 373 aa2.36□□□□□ -2.03
RIM1YCR028C-A SSU72P53538 206 aaPredicted RBP2.36□□□□□ -2.03
RIM1YCR028C-A NRM1P53718 249 aa2.36□□□□□ -2.03
RIM1YCR028C-A ATP19P81451 68 aa2.36□□□□□ -2.03
RIM1YCR028C-A RUB1Q03919 77 aa2.36□□□□□ -2.03
RIM1YCR028C-A ECM18Q04623 453 aa2.36□□□□□ -2.03
RIM1YCR028C-A CSI2Q08054 341 aa2.36□□□□□ -2.03
RIM1YCR028C-A YOL118CQ08259 102 aa2.36□□□□□ -2.03
RIM1YCR028C-A YPL162CQ12042 273 aa2.36□□□□□ -2.03
RIM1YCR028C-A YDL157CQ12082 118 aa2.36□□□□□ -2.03
RIM1YCR028C-A YLR050CQ12155 161 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A POC4Q12245 148 aaPredicted RBP2.36□□□□□ -2.03
RIM1YCR028C-A GEP5Q12393 293 aa2.36□□□□□ -2.03
RIM1YCR028C-A MPD1Q12404 318 aaKnown RBP2.36□□□□□ -2.03
RIM1YCR028C-A HTL1Q9URQ5 78 aa2.36□□□□□ -2.03
RIM1YCR028C-A CUP2P15315 225 aa2.35□□□□□ -2.03
RIM1YCR028C-A ZRT1P32804 376 aa2.35□□□□□ -2.03
RIM1YCR028C-A PAM17P36147 197 aa2.35□□□□□ -2.03
RIM1YCR028C-A FYV4P38783 130 aaPredicted RBP2.35□□□□□ -2.03
RIM1YCR028C-A YHR173CP38864 112 aa2.35□□□□□ -2.03
RIM1YCR028C-A YIL163CP40448 117 aa2.35□□□□□ -2.03
RIM1YCR028C-A AGE2P40529 298 aa2.35□□□□□ -2.03
RIM1YCR028C-A MSL1P40567 111 aaPredicted RBP2.35□□□□□ -2.03
RIM1YCR028C-A ECO1P43605 281 aa2.35□□□□□ -2.03
RIM1YCR028C-A YGL230CP53074 147 aa2.35□□□□□ -2.03
RIM1YCR028C-A CPD1P53314 239 aa2.35□□□□□ -2.03
RIM1YCR028C-A DYN2Q02647 92 aa2.35□□□□□ -2.03
RIM1YCR028C-A RRS1Q08746 203 aaKnown RBP2.35□□□□□ -2.03
RIM1YCR028C-A CSM4Q08955 156 aa2.35□□□□□ -2.03
RIM1YCR028C-A WIP1Q2V2P8 89 aa2.35□□□□□ -2.03
RIM1YCR028C-A YMR316C-AI2HB70 103 aa2.34□□□□□ -2.03
RIM1YCR028C-A COX2P00410 251 aa2.34□□□□□ -2.03
RIM1YCR028C-A SEC4P07560 215 aaKnown RBP2.34□□□□□ -2.03
RIM1YCR028C-A TIR1P10863 254 aa2.34□□□□□ -2.03
RIM1YCR028C-A GSP1P32835 219 aaKnown RBP2.34□□□□□ -2.03
RIM1YCR028C-A GSP2P32836 220 aaKnown RBP2.34□□□□□ -2.03
RIM1YCR028C-A PRS4P38063 326 aaPredicted RBP2.34□□□□□ -2.03
RIM1YCR028C-A PAU7P39545 55 aa2.34□□□□□ -2.03
RIM1YCR028C-A YAR068WP39564 161 aa2.34□□□□□ -2.03
RIM1YCR028C-A UPS3Q04006 179 aa2.34□□□□□ -2.03
RIM1YCR028C-A SDH7Q04401 133 aa2.34□□□□□ -2.03
RIM1YCR028C-A GRH1Q04410 372 aaKnown RBP2.34□□□□□ -2.03
RIM1YCR028C-A RAF1Q06891 181 aa2.34□□□□□ -2.03
RIM1YCR028C-A YPL257WQ08974 193 aa2.34□□□□□ -2.03
RIM1YCR028C-A RFM1Q12192 310 aa2.34□□□□□ -2.03
RIM1YCR028C-A YLR363W-AQ3E747 85 aa2.34□□□□□ -2.03
RIM1YCR028C-A YIL046W-AQ3E7Z4 54 aa2.34□□□□□ -2.03
RIM1YCR028C-A YOS1Q3E834 85 aa2.34□□□□□ -2.03
RIM1YCR028C-A Q0144Q9ZZW2 109 aa2.34□□□□□ -2.03
RIM1YCR028C-A SAL1D6W196 494 aa2.33□□□□□ -2.04
RIM1YCR028C-A PAI3P01094 68 aa2.33□□□□□ -2.04
RIM1YCR028C-A YPR170W-BP0C5R9 85 aa2.33□□□□□ -2.04
RIM1YCR028C-A SEC11P15367 167 aa2.33□□□□□ -2.04
RIM1YCR028C-A COX10P21592 462 aa2.33□□□□□ -2.04
RIM1YCR028C-A MIG1P27705 504 aa2.33□□□□□ -2.04
RIM1YCR028C-A YKR070WP36151 352 aaKnown RBP2.33□□□□□ -2.04
RIM1YCR028C-A YBL071CP38185 102 aa2.33□□□□□ -2.04
RIM1YCR028C-A DOG2P38773 246 aa2.33□□□□□ -2.04
RIM1YCR028C-A YER084WP40057 128 aa2.33□□□□□ -2.04
RIM1YCR028C-A YJL028WP47062 111 aa2.33□□□□□ -2.04
RIM1YCR028C-A SIP18P50263 79 aa2.33□□□□□ -2.04
RIM1YCR028C-A SDS23P53172 527 aa2.33□□□□□ -2.04
RIM1YCR028C-A YHP1Q04116 353 aa2.33□□□□□ -2.04
RIM1YCR028C-A DPP1Q05521 289 aa2.33□□□□□ -2.04
RIM1YCR028C-A ARC18Q05933 178 aaKnown RBP2.33□□□□□ -2.04
RIM1YCR028C-A MRS1P07266 363 aa2.32□□□□□ -2.04
RIM1YCR028C-A DDI2P0CH63 225 aa2.32□□□□□ -2.04
RIM1YCR028C-A DDI3P0CH64 225 aa2.32□□□□□ -2.04
RIM1YCR028C-A MRPL31P14063 131 aaPredicted RBP2.32□□□□□ -2.04
RIM1YCR028C-A APS1P35181 156 aa2.32□□□□□ -2.04
RIM1YCR028C-A CSH1P38287 376 aa2.32□□□□□ -2.04
RIM1YCR028C-A YGP1P38616 354 aaKnown RBP2.32□□□□□ -2.04
RIM1YCR028C-A YFR045WP43617 309 aa2.32□□□□□ -2.04
RIM1YCR028C-A YGR017WP53210 297 aa2.32□□□□□ -2.04
RIM1YCR028C-A CAB4P53332 305 aa2.32□□□□□ -2.04
RIM1YCR028C-A POP3P53833 195 aaPredicted RBP2.32□□□□□ -2.04
RIM1YCR028C-A YDR209CQ03480 137 aa2.32□□□□□ -2.04
RIM1YCR028C-A RAV2Q03956 351 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms