RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C ERF2Q06551 359 aa5.05□□□□□ -1.6
RGD1YBR260C MET32Q12041 191 aa5.05□□□□□ -1.6
RGD1YBR260C ENV10Q99382 181 aa5.05□□□□□ -1.6
RGD1YBR260C YCR085WP25650 117 aa5.04□□□□□ -1.6
RGD1YBR260C MID2P36027 376 aa5.04□□□□□ -1.6
RGD1YBR260C CSH1P38287 376 aa5.04□□□□□ -1.6
RGD1YBR260C ATP19P81451 68 aa5.04□□□□□ -1.6
RGD1YBR260C RAF1Q06891 181 aa5.04□□□□□ -1.6
RGD1YBR260C YFL041W-AQ3E817 63 aa5.04□□□□□ -1.6
RGD1YBR260C MDM10P18409 493 aa5.04□□□□□ -1.6
RGD1YBR260C YHR173CP38864 112 aa5.04□□□□□ -1.6
RGD1YBR260C HNT2P49775 206 aa5.04□□□□□ -1.6
RGD1YBR260C RHO5P53879 331 aaKnown RBP5.04□□□□□ -1.6
RGD1YBR260C YDR029WQ12111 104 aa5.04□□□□□ -1.6
RGD1YBR260C HTL1Q9URQ5 78 aa5.04□□□□□ -1.6
RGD1YBR260C PIS1P06197 220 aaKnown RBP5.03□□□□□ -1.6
RGD1YBR260C YBR121C-AP0C5L4 52 aa5.03□□□□□ -1.6
RGD1YBR260C RPL30P14120 105 aaKnown RBP5.03□□□□□ -1.6
RGD1YBR260C UBC5P15732 148 aa5.03□□□□□ -1.6
RGD1YBR260C UBS1P38290 277 aa5.03□□□□□ -1.6
RGD1YBR260C YHM2Q04013 314 aa5.03□□□□□ -1.6
RGD1YBR260C YMR103CQ04436 120 aa5.03□□□□□ -1.6
RGD1YBR260C RPL27AP0C2H6 136 aaKnown RBP5.02□□□□□ -1.61
RGD1YBR260C RPL27BP0C2H7 136 aaKnown RBP5.02□□□□□ -1.61
RGD1YBR260C LCB3P47013 409 aa5.02□□□□□ -1.61
RGD1YBR260C VPS55P47111 140 aa5.02□□□□□ -1.61
RGD1YBR260C YMR317WQ04893 1140 aa5.02□□□□□ -1.61
RGD1YBR260C VPS68Q12016 184 aa5.02□□□□□ -1.61
RGD1YBR260C RFM1Q12192 310 aa5.02□□□□□ -1.61
RGD1YBR260C ECM12O13529 151 aa5.02□□□□□ -1.61
RGD1YBR260C BET2P20133 325 aa5.02□□□□□ -1.61
RGD1YBR260C DSE2P38844 325 aa5.02□□□□□ -1.61
RGD1YBR260C TIF34P40217 347 aaKnown RBP5.02□□□□□ -1.61
RGD1YBR260C RDL2Q08742 149 aaKnown RBP5.02□□□□□ -1.61
RGD1YBR260C YOR097CQ12274 175 aaPredicted RBP5.02□□□□□ -1.61
RGD1YBR260C RAD6P06104 172 aa5.01□□□□□ -1.61
RGD1YBR260C CIS3P47001 227 aa5.01□□□□□ -1.61
RGD1YBR260C YNR077CP53758 84 aa5.01□□□□□ -1.61
RGD1YBR260C RRG8Q06109 277 aa5.01□□□□□ -1.61
RGD1YBR260C FIT2Q08906 153 aa5.01□□□□□ -1.61
RGD1YBR260C RPS28BP0C0X0 67 aaKnown RBP5.01□□□□□ -1.61
RGD1YBR260C YDL022C-AP0C5L6 82 aa5.01□□□□□ -1.61
RGD1YBR260C IMP1P28627 190 aa5.01□□□□□ -1.61
RGD1YBR260C YKR032WP36127 104 aa5.01□□□□□ -1.61
RGD1YBR260C HST4P53688 370 aa5.01□□□□□ -1.61
RGD1YBR260C ATG33Q06485 197 aa5.01□□□□□ -1.61
RGD1YBR260C IRC19Q07843 230 aa5.01□□□□□ -1.61
RGD1YBR260C RPS28AQ3E7X9 67 aaPredicted RBP5.01□□□□□ -1.61
RGD1YBR260C YCL021W-AQ96VH3 125 aa5.01□□□□□ -1.61
RGD1YBR260C CDC26P14724 124 aa5□□□□□ -1.61
RGD1YBR260C HSP12P22943 109 aaKnown RBP5□□□□□ -1.61
RGD1YBR260C ISF1P32488 338 aa5□□□□□ -1.61
RGD1YBR260C MRPS5P33759 307 aa5□□□□□ -1.61
RGD1YBR260C PAU7P39545 55 aa5□□□□□ -1.61
RGD1YBR260C FIP1P45976 327 aa5□□□□□ -1.61
RGD1YBR260C CAX4P53223 239 aa5□□□□□ -1.61
RGD1YBR260C COF1Q03048 143 aaKnown RBP5□□□□□ -1.61
RGD1YBR260C LSM6Q06406 86 aaKnown RBP5□□□□□ -1.61
RGD1YBR260C YRA1Q12159 226 aaKnown RBP5□□□□□ -1.61
RGD1YBR260C YHR214C-EQ8TGK0 99 aa5□□□□□ -1.61
RGD1YBR260C ROX3P25046 220 aa4.99□□□□□ -1.61
RGD1YBR260C HSP150P32478 413 aa4.99□□□□□ -1.61
RGD1YBR260C YHR140WP38842 239 aa4.99□□□□□ -1.61
RGD1YBR260C OYE3P41816 400 aaPredicted RBP4.99□□□□□ -1.61
RGD1YBR260C AIM34Q03673 198 aa4.99□□□□□ -1.61
RGD1YBR260C NCE102Q12207 173 aaRIP-Chip data4.99□□□□□ -1.61not detected
RGD1YBR260C KTI12P34253 313 aaKnown RBP4.99□□□□□ -1.61
RGD1YBR260C FMP46P36141 133 aaKnown RBP4.99□□□□□ -1.61
RGD1YBR260C VTC1P40046 129 aaRIP-Chip data4.99□□□□□ -1.61not detected
RGD1YBR260C ALG13P53178 202 aa4.99□□□□□ -1.61
RGD1YBR260C ABF2Q02486 183 aa4.99□□□□□ -1.61
RGD1YBR260C YPL261CQ08976 102 aa4.99□□□□□ -1.61
RGD1YBR260C YER079WP40052 210 aaKnown RBP4.98□□□□□ -1.61
RGD1YBR260C VHS2P40463 436 aa4.98□□□□□ -1.61
RGD1YBR260C OST1P41543 476 aaKnown RBP4.98□□□□□ -1.61
RGD1YBR260C RXT3Q07458 294 aa4.98□□□□□ -1.61
RGD1YBR260C DAD1Q12248 94 aa4.98□□□□□ -1.61
RGD1YBR260C Q0182Q9ZZW1 134 aa4.98□□□□□ -1.61
RGD1YBR260C YHR139C-AO13536 103 aa4.97□□□□□ -1.61
RGD1YBR260C ARF1P11076 181 aaKnown RBP4.97□□□□□ -1.61
RGD1YBR260C MXR2P25566 168 aa4.97□□□□□ -1.61
RGD1YBR260C GPI18P38211 433 aa4.97□□□□□ -1.61
RGD1YBR260C MRPL49P40858 161 aaPredicted RBP4.97□□□□□ -1.61
RGD1YBR260C SKI6P46948 246 aaPredicted RBP4.97□□□□□ -1.61
RGD1YBR260C BOL1Q3E793 110 aa4.97□□□□□ -1.61
RGD1YBR260C BLM10P43583 2143 aa4.97□□□□□ -1.61
RGD1YBR260C CYR1P08678 2026 aaKnown RBP4.97□□□□□ -1.61
RGD1YBR260C YKL070WP36087 169 aa4.97□□□□□ -1.61
RGD1YBR260C YMR141CP40211 102 aa4.97□□□□□ -1.61
RGD1YBR260C UBC13P52490 153 aa4.97□□□□□ -1.61
RGD1YBR260C YLR112WQ12130 139 aa4.97□□□□□ -1.61
RGD1YBR260C YAL064W-BO13512 126 aa4.96□□□□□ -1.62
RGD1YBR260C TOM40P23644 387 aaKnown RBP4.96□□□□□ -1.62
RGD1YBR260C RPL15BP54780 204 aaPredicted RBP4.96□□□□□ -1.62
RGD1YBR260C GPI19Q04082 140 aa4.96□□□□□ -1.62
RGD1YBR260C MIX14Q04341 121 aa4.96□□□□□ -1.62
RGD1YBR260C SUT2Q12286 268 aa4.96□□□□□ -1.62
RGD1YBR260C INO2P26798 304 aa4.96□□□□□ -1.62
RGD1YBR260C SMP1P38128 452 aa4.96□□□□□ -1.62
RGD1YBR260C ECO1P43605 281 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms