RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 HSCBQ8IWL3 235 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 DCLK2Q8N568 766 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 GLIS3Q8NEA6 775 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 OR5B17Q8NGF7 314 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 HPS3Q969F9 1004 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 FAM83CQ9BQN1 747 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 GKN1Q9NS71 199 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 FAM13BQ9NYF5 915 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 CDH9Q9ULB4 789 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 RAB23Q9ULC3 237 aa21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 MAGED2Q9UNF1 606 aaPredicted RBP21.4■■□□□ 1.02
UBE2D3-220ENST00000505307 FAM163BP0C2L3 166 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 SNRNP35Q16560 246 aaKnown RBP21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 DDR2Q16832 855 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 LMBRD2Q68DH5 695 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 CC2D1AQ6P1N0 951 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 FAM171BQ6P995 826 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 TXNDC11Q6PKC3 985 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 OSTM1Q86WC4 334 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 USP13Q92995 863 aaPredicted RBP21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 FNBP1Q96RU3 617 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 AGPAT3Q9NRZ7 376 aa21.39■■□□□ 1.01
UBE2D3-220ENST00000505307 PVALEFA0A1B0GWK0 134 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 POLR2DO15514 142 aaKnown RBP21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 TGFB1I1O43294 461 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 SDHBP21912 280 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 CNR2P34972 360 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 GPR15P49685 360 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 SATB1Q01826 763 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 TNK2Q07912 1038 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 EHHADHQ08426 723 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 RUNX3Q13761 415 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 CCINQ13939 588 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 GAS6Q14393 721 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 PUM1Q14671 1186 aaKnown RBP eCLIP21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 TXNDC8Q6A555 127 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 VSTM1Q6UX27 236 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 TRAPPC11Q7Z392 1133 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 FSIP1Q8NA03 581 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 XXYLT1Q8NBI6 393 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 EXOC4Q96A65 974 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 SYT15Q9BQS2 421 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 SMG9Q9H0W8 520 aaKnown RBP21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 MAGEC2Q9UBF1 373 aaPredicted RBP21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 GMEB2Q9UKD1 530 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 CFAP45Q9UL16 551 aa21.38■■□□□ 1.01
UBE2D3-220ENST00000505307 PTPRJQ12913 1337 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 F13A1P00488 732 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 TNNI1P19237 187 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 WARSP23381 471 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 HOXA6P31267 233 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 ME1P48163 572 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 PSMD6Q15008 389 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 PON2Q15165 354 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 PDGFRLQ15198 375 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 SDHAF4Q5VUM1 108 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 SCARA3Q6AZY7 606 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 TTC8Q8TAM2 541 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 RMDN1Q96DB5 314 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 FAM84AQ96KN4 292 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 SPATA17Q96L03 361 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 RBM12Q9NTZ6 932 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 EHD2Q9NZN4 543 aa21.37■■□□□ 1.01
UBE2D3-220ENST00000505307 USP17L7P0C7H9 530 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 PDE6CP51160 858 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 FAM160A1Q05DH4 1040 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 BMT2Q1RMZ1 405 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 SCN4BQ8IWT1 228 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 C12orf56Q8IXR9 622 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 SCFD1Q8WVM8 642 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 KBTBD7Q8WVZ9 684 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 MMS19Q96T76 1030 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 CGRRF1Q99675 332 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 PCDHA7Q9UN72 937 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 CCL26Q9Y258 94 aa21.36■■□□□ 1.01
UBE2D3-220ENST00000505307 DENND4CQ5VZ89 1909 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 TRAV19A0A0A6YYK7 116 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 TACC1O75410 805 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 DLATP10515 647 aaKnown RBP21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 PFKLP17858 780 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 CYP24A1Q07973 514 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 GRSF1Q12849 480 aaKnown RBP eCLIP21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 FOXD4L5Q5VV16 416 aaPredicted RBP21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 RESP18Q5W5W9 173 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 LAIR1Q6GTX8 287 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 LONP2Q86WA8 852 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 RDH13Q8NBN7 331 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 GOLGA5Q8TBA6 731 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 FOXD4L4Q8WXT5 416 aaPredicted RBP21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 HPS4Q9NQG7 708 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 FRYLO94915 3013 aa21.35■■□□□ 1.01
UBE2D3-220ENST00000505307 DCHS1Q96JQ0 3298 aa21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 PRR5-ARHGAP8B1AHC4 643 aa21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 TRDMT1O14717 391 aaKnown RBP21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 CLIC2O15247 247 aa21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 ATG13O75143 517 aa21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 TADA3O75528 432 aa21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 STAU1O95793 577 aaKnown RBP21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 LMO2P25791 158 aa21.34■■□□□ 1.01
UBE2D3-220ENST00000505307 CYP2J2P51589 502 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms