RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ALCAMQ13740 583 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 SOWAHAQ2M3V2 549 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 LMBRD2Q68DH5 695 aaPredicted RBP18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 FSTL4Q6MZW2 842 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 TMEM86AQ8N2M4 240 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 PDILTQ8N807 584 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 FBRSL1Q9HCM7 1045 aaKnown RBP18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 ABCB6Q9NP58 842 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 CDV3Q9UKY7 258 aaKnown RBP18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 CACNA1BQ00975 2339 aa18.75■□□□□ 0.59
EXOSC4-201ENST00000316052 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 GREB1Q4ZG55 1949 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 DCDC2BA2VCK2 349 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 SOBPA7XYQ1 873 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 GABRDO14764 452 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 NOL4O94818 638 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 HOXA6P31267 233 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 CNR2P34972 360 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 HOXD13P35453 343 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 MYL7Q01449 175 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 TMEM196Q5HYL7 178 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 GPD1LQ8N335 351 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 TOP6BLQ8N6T0 577 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 OR5B17Q8NGF7 314 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 MRPS31Q92665 395 aaKnown RBP18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 MYRFLQ96LU7 910 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 CYP2S1Q96SQ9 504 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 TMEM206Q9H813 350 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
EXOSC4-201ENST00000316052 TRDMT1O14717 391 aaKnown RBP18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 ATP2C2O75185 946 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 LHX1P48742 406 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 RPL10AP62906 217 aaKnown RBP18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 ZNF268Q14587 947 aaPredicted RBP18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 NAIF1Q69YI7 327 aaPredicted RBP18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 FAM171BQ6P995 826 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 LIMS2Q7Z4I7 341 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 CBWD2Q8IUF1 395 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 ADGRF2Q8IZF7 708 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 TRMT2BQ96GJ1 504 aaKnown RBP18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 INTS13Q9NVM9 706 aa18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
EXOSC4-201ENST00000316052 LRP3O75074 770 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 EGFP01133 1207 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 TMEM191BP0C7N4 346 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 LMO2P25791 158 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 PXNP49023 591 aaPredicted RBP18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 GALK1P51570 392 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 CFAP221Q4G0U5 840 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 WDR5BQ86VZ2 330 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 CCDC65Q8IXS2 484 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 FAM160A2Q8N612 972 aaPredicted RBP18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 SPATA18Q8TC71 538 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 INTS4Q96HW7 963 aaKnown RBP18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 RTKNQ9BST9 563 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 KIF9Q9HAQ2 790 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 SEMA4GQ9NTN9 838 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 EML5Q05BV3 1969 aa18.72■□□□□ 0.59
EXOSC4-201ENST00000316052 ZNF233A6NK53 670 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 PCSK1P29120 753 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 GRSF1Q12849 480 aaKnown RBP eCLIP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 E2F4Q16254 413 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 CC2D1AQ6P1N0 951 aaPredicted RBP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 CEP68Q76N32 757 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 SPATA2LQ8IUW3 424 aaPredicted RBP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 SCN4BQ8IWT1 228 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 HPDLQ96IR7 371 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 ANKRD36BP1Q96IX9 119 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 ZSCAN16Q9H4T2 348 aaPredicted RBP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 TRPC7Q9HCX4 862 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 KBTBD4Q9NVX7 518 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 GCNT4Q9P109 453 aa18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 TFIP11Q9UBB9 837 aaKnown RBP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 UXTQ9UBK9 157 aaPredicted RBP18.71■□□□□ 0.59
EXOSC4-201ENST00000316052 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 C2orf78A6NCI8 922 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 STX6O43752 255 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 GDF9O60383 454 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 GJA4P35212 333 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 PSMC1P62191 440 aaKnown RBP18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 MTF1Q14872 753 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 PDGFRLQ15198 375 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 STK38Q15208 465 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 ZNF77Q15935 545 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 CSRP2Q16527 193 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 DUOXA2Q1HG44 320 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 PRR23CQ6ZRP0 262 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 FUBP3Q96I24 572 aaKnown RBP eCLIP18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 TRIM9Q9C026 710 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 TNMDQ9H2S6 317 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 ECT2Q9H8V3 914 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 CRTAC1Q9NQ79 661 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms