RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 NHP6AP11632 93 aaKnown RBP-2.83□□□□□ -2.86
snR47snR47 UTP11P34247 250 aaPredicted RBP-2.83□□□□□ -2.86
snR47snR47 YBR016WP38216 128 aa-2.83□□□□□ -2.86
snR47snR47 LIP1Q03579 150 aa-2.83□□□□□ -2.86
snR47snR47 YPR114WQ06107 315 aa-2.83□□□□□ -2.86
snR47snR47 YOR214CQ12282 236 aa-2.83□□□□□ -2.86
snR47snR47 RPL40AP0CH08 128 aaKnown RBP-2.84□□□□□ -2.86
snR47snR47 RPL40BP0CH09 128 aaKnown RBP-2.84□□□□□ -2.86
snR47snR47 RUB1Q03919 77 aa-2.84□□□□□ -2.86
snR47snR47 FES1P38260 290 aa-2.85□□□□□ -2.87
snR47snR47 PGA1P53896 198 aa-2.85□□□□□ -2.87
snR47snR47 YHR213WP0CI67 198 aa-2.86□□□□□ -2.87
snR47snR47 XPT1P47165 209 aa-2.86□□□□□ -2.87
snR47snR47 MMS2P53152 137 aa-2.86□□□□□ -2.87
snR47snR47 IRC19Q07843 230 aa-2.86□□□□□ -2.87
snR47snR47 SPS18P32572 300 aa-2.87□□□□□ -2.87
snR47snR47 YEL028WP39989 153 aa-2.87□□□□□ -2.87
snR47snR47 YPR153WQ06537 140 aa-2.87□□□□□ -2.87
snR47snR47 URB1P34241 1764 aaKnown RBP-2.87□□□□□ -2.87
snR47snR47 SEC7P11075 2009 aaKnown RBP-2.88□□□□□ -2.87
snR47snR47 YGL041W-AP0C5N3 154 aa-2.88□□□□□ -2.87
snR47snR47 YMR31P19955 123 aa-2.88□□□□□ -2.87
snR47snR47 BNA6P43619 295 aa-2.88□□□□□ -2.87
snR47snR47 RCF2P53721 224 aa-2.88□□□□□ -2.87
snR47snR47 YNL184CP53876 108 aa-2.88□□□□□ -2.87
snR47snR47 YLR283WQ05867 314 aa-2.88□□□□□ -2.87
snR47snR47 TRM3Q07527 1436 aa-2.88□□□□□ -2.87
snR47snR47 RPO41P13433 1351 aaKnown RBP-2.88□□□□□ -2.87
snR47snR47 RIM15P43565 1770 aa-2.89□□□□□ -2.87
snR47snR47 VMA10P48836 114 aaKnown RBP-2.89□□□□□ -2.87
snR47snR47 HHO1P53551 258 aa-2.89□□□□□ -2.87
snR47snR47 YPR014CQ6B0W2 109 aa-2.89□□□□□ -2.87
snR47snR47 AIM34Q03673 198 aa-2.9□□□□□ -2.87
snR47snR47 ANB1P19211 157 aa-2.91□□□□□ -2.88
snR47snR47 CYC2P38909 366 aa-2.91□□□□□ -2.88
snR47snR47 ERV25P54837 211 aaKnown RBP-2.91□□□□□ -2.88
snR47snR47 SRL4Q03085 281 aa-2.91□□□□□ -2.88
snR47snR47 PLP1Q04004 230 aa-2.91□□□□□ -2.88
snR47snR47 MPD1Q12404 318 aaKnown RBP-2.91□□□□□ -2.88
snR47snR47 TOR1P35169 2470 aa-2.92□□□□□ -2.88
snR47snR47 THP2O13539 261 aaKnown RBP-2.92□□□□□ -2.88
snR47snR47 STF1P01098 86 aa-2.92□□□□□ -2.88
snR47snR47 VMA6P32366 345 aaKnown RBP-2.92□□□□□ -2.88
snR47snR47 YNL198CP40166 100 aa-2.92□□□□□ -2.88
snR47snR47 PHS1P40857 217 aa-2.92□□□□□ -2.88
snR47snR47 PFY1P07274 126 aa-2.93□□□□□ -2.88
snR47snR47 MATALPHA1P0CY06 175 aa-2.93□□□□□ -2.88
snR47snR47 HMLALPHA1P0CY07 175 aa-2.93□□□□□ -2.88
snR47snR47 GPI2P46961 280 aa-2.93□□□□□ -2.88
snR47snR47 TIM13P53299 105 aa-2.93□□□□□ -2.88
snR47snR47 HUT1Q12520 339 aa-2.93□□□□□ -2.88
snR47snR47 YKL183C-AQ3E765 70 aa-2.93□□□□□ -2.88
snR47snR47 YIL134C-AQ45U18 67 aa-2.93□□□□□ -2.88
snR47snR47 SRP21P32342 167 aa-2.94□□□□□ -2.88
snR47snR47 SRP102P36057 244 aaPredicted RBP-2.94□□□□□ -2.88
snR47snR47 RTC3P38804 111 aaPredicted RBP-2.94□□□□□ -2.88
snR47snR47 YGR164WP53291 111 aa-2.94□□□□□ -2.88
snR47snR47 HPA2Q06592 156 aa-2.94□□□□□ -2.88
snR47snR47 YBR121C-AP0C5L4 52 aa-2.95□□□□□ -2.88
snR47snR47 TTI2P47168 421 aa-2.95□□□□□ -2.88
snR47snR47 YNR064CP53750 290 aa-2.95□□□□□ -2.88
snR47snR47 YDR102CQ03864 110 aa-2.95□□□□□ -2.88
snR47snR47 YGR240C-AQ3E786 66 aa-2.95□□□□□ -2.88
snR47snR47 ENV10Q99382 181 aa-2.95□□□□□ -2.88
snR47snR47 YRF1-6P53819 1859 aa-2.95□□□□□ -2.88
snR47snR47 NUF2P33895 451 aa-2.96□□□□□ -2.88
snR47snR47 FMC1P40491 155 aa-2.96□□□□□ -2.88
snR47snR47 MRS4P23500 304 aa-2.97□□□□□ -2.88
snR47snR47 LDB18Q07887 179 aa-2.97□□□□□ -2.88
snR47snR47 OCA6Q12454 224 aa-2.97□□□□□ -2.88
snR47snR47 SPA2P23201 1466 aaKnown RBP-2.97□□□□□ -2.89
snR47snR47 SNT2P53127 1403 aa-2.98□□□□□ -2.89
snR47snR47 YNL194CP40169 301 aa-2.98□□□□□ -2.89
snR47snR47 ATP14Q12349 124 aa-2.98□□□□□ -2.89
snR47snR47 YRB1P41920 201 aaKnown RBP-2.99□□□□□ -2.89
snR47snR47 RAD9P14737 1309 aa-2.99□□□□□ -2.89
snR47snR47 FMP27Q06179 2628 aa-3□□□□□ -2.89
snR47snR47 COX5BP00425 151 aa-3□□□□□ -2.89
snR47snR47 CBT1P36038 271 aaPredicted RBP-3□□□□□ -2.89
snR47snR47 GCV3P39726 170 aaPredicted RBP-3□□□□□ -2.89
snR47snR47 YIL163CP40448 117 aa-3□□□□□ -2.89
snR47snR47 YOL024WQ08172 172 aa-3□□□□□ -2.89
snR47snR47 TY1B-LR3P0C2I6 1755 aaKnown RBP-3.01□□□□□ -2.89
snR47snR47 TY1B-PR3P0C2J1 1755 aaKnown RBP-3.01□□□□□ -2.89
snR47snR47 IKI1P38874 309 aa-3.01□□□□□ -2.89
snR47snR47 YLR296WQ05898 108 aa-3.01□□□□□ -2.89
snR47snR47 RPS29AP41057 56 aaKnown RBP-3.02□□□□□ -2.89
snR47snR47 YDR246W-AQ3E763 66 aa-3.02□□□□□ -2.89
snR47snR47 YKL102CP34249 101 aa-3.03□□□□□ -2.89
snR47snR47 YCL001W-AP87012 153 aa-3.03□□□□□ -2.89
snR47snR47 YPL067CQ02754 198 aa-3.03□□□□□ -2.89
snR47snR47 FCF2Q12035 217 aaPredicted RBP-3.03□□□□□ -2.89
snR47snR47 CWC23P52868 283 aaPredicted RBP-3.04□□□□□ -2.9
snR47snR47 EFM5P53200 248 aaKnown RBP-3.04□□□□□ -2.9
snR47snR47 YDL085C-AQ3E7B7 68 aaKnown RBP-3.04□□□□□ -2.9
snR47snR47 YLR255CO13574 117 aa-3.05□□□□□ -2.9
snR47snR47 AHC2P25649 128 aa-3.05□□□□□ -2.9
snR47snR47 COX23P38824 151 aa-3.05□□□□□ -2.9
snR47snR47 GTT2Q12390 233 aa-3.05□□□□□ -2.9
snR47snR47 NCB2Q92317 146 aa-3.05□□□□□ -2.9
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms