RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W TY1B-PR2P0C2J0 1756 aa1.98□□□□□ -2.09
TRM112YNR046W COX8P04039 78 aa1.97□□□□□ -2.09
TRM112YNR046W RAD6P06104 172 aa1.97□□□□□ -2.09
TRM112YNR046W FPR1P20081 114 aaKnown RBP1.97□□□□□ -2.09
TRM112YNR046W YHL018WP38744 120 aaPredicted RBP1.97□□□□□ -2.09
TRM112YNR046W FYV4P38783 130 aaPredicted RBP1.97□□□□□ -2.09
TRM112YNR046W RIO2P40160 425 aaKnown RBP1.97□□□□□ -2.09
TRM112YNR046W FIP1P45976 327 aa1.97□□□□□ -2.09
TRM112YNR046W THG1P53215 237 aaKnown RBP1.97□□□□□ -2.09
TRM112YNR046W PIR1Q03178 341 aa1.97□□□□□ -2.09
TRM112YNR046W RCE1Q03530 315 aa1.97□□□□□ -2.09
TRM112YNR046W AIM36Q03798 255 aa1.97□□□□□ -2.09
TRM112YNR046W YPR114WQ06107 315 aa1.97□□□□□ -2.09
TRM112YNR046W FCY1Q12178 158 aa1.97□□□□□ -2.09
TRM112YNR046W YLR118CQ12354 227 aa1.97□□□□□ -2.09
TRM112YNR046W PTC1P35182 281 aa1.96□□□□□ -2.1
TRM112YNR046W YPT31P38555 223 aaKnown RBP1.96□□□□□ -2.1
TRM112YNR046W AIM11P87275 137 aa1.96□□□□□ -2.1
TRM112YNR046W MZM1Q03429 123 aaPredicted RBP1.96□□□□□ -2.1
TRM112YNR046W FCF2Q12035 217 aaPredicted RBP1.96□□□□□ -2.1
TRM112YNR046W YNL277W-AQ3E7Z0 62 aa1.96□□□□□ -2.1
TRM112YNR046W SPP41P38904 1435 aa1.96□□□□□ -2.1
TRM112YNR046W DUR1,2P32528 1835 aaKnown RBP1.96□□□□□ -2.1
TRM112YNR046W SPS2P08459 502 aa1.95□□□□□ -2.1
TRM112YNR046W YRA2P36036 203 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
TRM112YNR046W YER181CP40097 107 aa1.95□□□□□ -2.1
TRM112YNR046W FLX1P40464 311 aa1.95□□□□□ -2.1
TRM112YNR046W YNL019CP53975 284 aa1.95□□□□□ -2.1
TRM112YNR046W SPC3Q12133 184 aa1.95□□□□□ -2.1
TRM112YNR046W REV3P14284 1504 aa1.95□□□□□ -2.1
TRM112YNR046W MYO2P19524 1574 aaKnown RBP1.94□□□□□ -2.1
TRM112YNR046W TSC11P40061 1430 aa1.94□□□□□ -2.1
TRM112YNR046W MYO1P08964 1928 aa1.94□□□□□ -2.1
TRM112YNR046W VAR1P02381 398 aa1.94□□□□□ -2.1
TRM112YNR046W ATP5P09457 212 aa1.94□□□□□ -2.1
TRM112YNR046W YER039C-AP0CD97 72 aa1.94□□□□□ -2.1
TRM112YNR046W SRP21P32342 167 aa1.94□□□□□ -2.1
TRM112YNR046W SPT14P32363 452 aa1.94□□□□□ -2.1
TRM112YNR046W SHB17P36136 271 aaKnown RBP1.94□□□□□ -2.1
TRM112YNR046W YKR070WP36151 352 aaKnown RBP1.94□□□□□ -2.1
TRM112YNR046W YHR140WP38842 239 aa1.94□□□□□ -2.1
TRM112YNR046W MOB1P40484 314 aa1.94□□□□□ -2.1
TRM112YNR046W SFT1P43682 97 aa1.94□□□□□ -2.1
TRM112YNR046W GPI2P46961 280 aa1.94□□□□□ -2.1
TRM112YNR046W YAE1P47118 141 aaPredicted RBP1.94□□□□□ -2.1
TRM112YNR046W FIT2Q08906 153 aa1.94□□□□□ -2.1
TRM112YNR046W YNL146C-AQ3E7Z1 64 aa1.94□□□□□ -2.1
TRM112YNR046W HSL1P34244 1518 aa1.94□□□□□ -2.1
TRM112YNR046W TY1B-BRQ12193 1756 aa1.94□□□□□ -2.1
TRM112YNR046W MSB2P32334 1306 aa1.93□□□□□ -2.1
TRM112YNR046W ESC1Q03661 1658 aaKnown RBP1.93□□□□□ -2.1
TRM112YNR046W TRM3Q07527 1436 aa1.93□□□□□ -2.1
TRM112YNR046W HAP2P06774 265 aa1.93□□□□□ -2.1
TRM112YNR046W ANB1P19211 157 aa1.93□□□□□ -2.1
TRM112YNR046W RPL14AP36105 138 aaKnown RBP1.93□□□□□ -2.1
TRM112YNR046W MRPL15P36523 253 aa1.93□□□□□ -2.1
TRM112YNR046W RPL14BP38754 138 aaKnown RBP1.93□□□□□ -2.1
TRM112YNR046W AIM18P38884 321 aa1.93□□□□□ -2.1
TRM112YNR046W HPA3P39979 161 aa1.93□□□□□ -2.1
TRM112YNR046W YLR422WQ06409 1932 aa1.93□□□□□ -2.1
TRM112YNR046W SEC7P11075 2009 aaKnown RBP1.93□□□□□ -2.1
TRM112YNR046W FAS1P07149 2051 aaKnown RBP1.92□□□□□ -2.1
TRM112YNR046W SEC59P20048 519 aa1.92□□□□□ -2.1
TRM112YNR046W YEL073CP39974 107 aa1.92□□□□□ -2.1
TRM112YNR046W HYR1P40581 163 aaKnown RBP1.92□□□□□ -2.1
TRM112YNR046W YJL218WP40892 196 aaKnown RBP1.92□□□□□ -2.1
TRM112YNR046W NHP10Q03435 203 aa1.92□□□□□ -2.1
TRM112YNR046W UPS3Q04006 179 aa1.92□□□□□ -2.1
TRM112YNR046W YLR042CQ07990 161 aa1.92□□□□□ -2.1
TRM112YNR046W HUT1Q12520 339 aa1.92□□□□□ -2.1
TRM112YNR046W YOR381W-AQ3E804 55 aa1.92□□□□□ -2.1
TRM112YNR046W YGL041W-AP0C5N3 154 aa1.91□□□□□ -2.1
TRM112YNR046W RPB7P34087 171 aa1.91□□□□□ -2.1
TRM112YNR046W ETR1P38071 380 aa1.91□□□□□ -2.1
TRM112YNR046W RPB11P38902 120 aa1.91□□□□□ -2.1
TRM112YNR046W NSE4P43124 402 aa1.91□□□□□ -2.1
TRM112YNR046W YGL230CP53074 147 aa1.91□□□□□ -2.1
TRM112YNR046W YGL193CP53097 103 aa1.91□□□□□ -2.1
TRM112YNR046W YHP1Q04116 353 aa1.91□□□□□ -2.1
TRM112YNR046W RIM9Q04734 239 aa1.91□□□□□ -2.1
TRM112YNR046W TVP18Q04767 167 aa1.91□□□□□ -2.1
TRM112YNR046W SYM1Q06563 197 aa1.91□□□□□ -2.1
TRM112YNR046W ATG41Q12048 136 aa1.91□□□□□ -2.1
TRM112YNR046W OCA6Q12454 224 aa1.91□□□□□ -2.1
TRM112YNR046W KTI11Q3E840 82 aa1.91□□□□□ -2.1
TRM112YNR046W LAA1P39526 2014 aa1.9□□□□□ -2.11
TRM112YNR046W RIF1P29539 1916 aa1.9□□□□□ -2.11
TRM112YNR046W HSP12P22943 109 aaKnown RBP1.9□□□□□ -2.11
TRM112YNR046W MAK31P23059 88 aa1.9□□□□□ -2.11
TRM112YNR046W AHT1P29589 182 aa1.9□□□□□ -2.11
TRM112YNR046W YHL042WP38729 150 aa1.9□□□□□ -2.11
TRM112YNR046W YEL028WP39989 153 aa1.9□□□□□ -2.11
TRM112YNR046W DIE2P50076 525 aa1.9□□□□□ -2.11
TRM112YNR046W GEP7P53171 287 aa1.9□□□□□ -2.11
TRM112YNR046W UPS1Q05776 175 aa1.9□□□□□ -2.11
TRM112YNR046W STF2P16965 84 aa1.89□□□□□ -2.11
TRM112YNR046W HTD2P38790 280 aaKnown RBP1.89□□□□□ -2.11
TRM112YNR046W YEA6P39953 335 aa1.89□□□□□ -2.11
TRM112YNR046W PHS1P40857 217 aa1.89□□□□□ -2.11
TRM112YNR046W ELC1Q03071 99 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 165.4 ms