RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	RAD6	P06104	172 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	RPS25B	P0C0T4	108 aa	Known RBP	1.26	□□□□□ -2.21
SSK2	YNR031C	HAP3	P13434	144 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	INO4	P13902	151 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	TRS65	P32893	560 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	YET1	P35723	206 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	VHS2	P40463	436 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	MEP2	P41948	499 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	NUP57	P48837	541 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	CRH1	P53301	507 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	1.26	□□□□□ -2.21	not detected
SSK2	YNR031C	AIM34	Q03673	198 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	STP3	Q05937	343 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	FCY1	Q12178	158 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	RPS25A	Q3E792	108 aa	Predicted RBP	1.26	□□□□□ -2.21
SSK2	YNR031C	YOR376W-A	Q3E805	51 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	YBR182C-A	Q8TGU6	64 aa		1.26	□□□□□ -2.21
SSK2	YNR031C	YHR139C-A	O13536	103 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	COX5B	P00425	151 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	TRP1	P00912	224 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	SNC2	P33328	115 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	TDA2	P40045	126 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	OST1	P41543	476 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	YFR035C	P43608	114 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	LCB3	P47013	409 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	BAT2	P47176	376 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	GRH1	Q04410	372 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	SME1	Q12330	94 aa	Predicted RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	ADH1	P00330	348 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	PIS1	P06197	220 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	RPS28B	P0C0X0	67 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	RPL18A	P0CX49	186 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	RPL18B	P0CX50	186 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	YCL002C	P25565	263 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	ATG8	P38182	117 aa	RIP-Chip data	1.25	□□□□□ -2.21	not detected
SSK2	YNR031C	YBL029W	P38201	376 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YNL165W	P53891	406 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YNL046W	P53956	172 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	SGF11	Q03067	99 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	RAV2	Q03956	351 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	VBA1	Q04301	562 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	CNL1	Q06333	122 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	STP4	Q07351	490 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	ATG5	Q12380	294 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	IZH2	Q12442	317 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YIR021W-A	Q3E739	70 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	DAT1	P13483	248 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	MDH2	P22133	377 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	CMC1	P36064	111 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	AUR1	P36107	401 aa	Predicted RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	SHE1	P38200	338 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	CUE1	P38428	203 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	SHU1	P38751	150 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YEA6	P39953	335 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	SYS1	P41544	203 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YGR219W	P53307	113 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	PMP3	P87284	55 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	ROT1	Q03691	256 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	MCP1	Q12106	302 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	TIR4	Q12218	487 aa	Predicted RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	YGK3	Q12222	375 aa	Predicted RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	YER190C-B	P0CX94	160 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YEL077W-A	P0CX95	160 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YGR296C-B	P0CX96	160 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YPL283W-B	P0CX97	160 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YPR204C-A	P0CX98	160 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	HMRA2	P0CY13	119 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	ANB1	P19211	157 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	QDR3	P38227	689 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	CSH1	P38287	376 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YHL037C	P38733	133 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	MST28	P39552	234 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	CWP2	P43497	92 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YFL065C	P43539	102 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	MST27	P53176	234 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YIF1	P53845	314 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	APS2	Q00381	147 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YPR203W	Q08994	102 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YLR050C	Q12155	161 aa	Known RBP	1.25	□□□□□ -2.21
SSK2	YNR031C	RLM1	Q12224	676 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	MCT1	Q12283	360 aa		1.25	□□□□□ -2.21
SSK2	YNR031C	YFL068W	P0CX99	160 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YLL066W-A	P0CY00	160 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YLL067W-A	P0CY01	160 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	TOM40	P23644	387 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	HOM6	P31116	359 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	IPT1	P38954	527 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	NSA2	P40078	261 aa	Known RBP	1.24	□□□□□ -2.21
SSK2	YNR031C	YIL169C	P40442	995 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	PRY1	P47032	299 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YJR015W	P47090	510 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	KNH1	P50112	268 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YMR253C	Q04835	414 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	RNH203	Q12338	110 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	RRT15	Q3E811	62 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YNR034W-A	Q3E841	98 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	YPR170W-B	P0C5R9	85 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	GPX2	P38143	162 aa		1.24	□□□□□ -2.21
SSK2	YNR031C	AVT5	P38176	459 aa		1.24	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 39 ms