RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W GRX5Q02784 150 aa2.51□□□□□ -2.01
SSU72YNL222W RCE1Q03530 315 aa2.51□□□□□ -2.01
SSU72YNL222W PBP4Q07362 185 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W YLR012CQ07927 99 aa2.51□□□□□ -2.01
SSU72YNL222W NAT5Q08689 176 aa2.51□□□□□ -2.01
SSU72YNL222W YPR203WQ08994 102 aa2.51□□□□□ -2.01
SSU72YNL222W FCY1Q12178 158 aa2.51□□□□□ -2.01
SSU72YNL222W YLR126CQ12288 251 aa2.51□□□□□ -2.01
SSU72YNL222W SME1Q12330 94 aaPredicted RBP2.51□□□□□ -2.01
SSU72YNL222W YPR145C-AQ2V2P0 78 aa2.51□□□□□ -2.01
SSU72YNL222W BOL1Q3E793 110 aa2.51□□□□□ -2.01
SSU72YNL222W KTI11Q3E840 82 aa2.51□□□□□ -2.01
SSU72YNL222W DDP1Q99321 188 aaKnown RBP2.51□□□□□ -2.01
SSU72YNL222W YPL229WQ99395 206 aa2.51□□□□□ -2.01
SSU72YNL222W MSW1P04803 379 aa2.5□□□□□ -2.01
SSU72YNL222W KRE1P17260 313 aa2.5□□□□□ -2.01
SSU72YNL222W TOM40P23644 387 aaKnown RBP2.5□□□□□ -2.01
SSU72YNL222W ACB1P31787 87 aa2.5□□□□□ -2.01
SSU72YNL222W ERG24P32462 438 aaKnown RBP2.5□□□□□ -2.01
SSU72YNL222W CLB6P32943 380 aa2.5□□□□□ -2.01
SSU72YNL222W YBR063CP38083 404 aa2.5□□□□□ -2.01
SSU72YNL222W SWM2P40342 146 aa2.5□□□□□ -2.01
SSU72YNL222W AVT7P40501 490 aa2.5□□□□□ -2.01
SSU72YNL222W SYS1P41544 203 aa2.5□□□□□ -2.01
SSU72YNL222W CPD1P53314 239 aa2.5□□□□□ -2.01
SSU72YNL222W CYT2Q00873 224 aa2.5□□□□□ -2.01
SSU72YNL222W PET191Q02772 108 aa2.5□□□□□ -2.01
SSU72YNL222W YMR103CQ04436 120 aa2.5□□□□□ -2.01
SSU72YNL222W UPS1Q05776 175 aa2.5□□□□□ -2.01
SSU72YNL222W YPL162CQ12042 273 aa2.5□□□□□ -2.01
SSU72YNL222W YDR029WQ12111 104 aa2.5□□□□□ -2.01
SSU72YNL222W YPR064WQ12492 139 aa2.5□□□□□ -2.01
SSU72YNL222W VMA9Q3E7B6 73 aa2.5□□□□□ -2.01
SSU72YNL222W YNL277W-AQ3E7Z0 62 aa2.5□□□□□ -2.01
SSU72YNL222W BPT1P14772 1559 aa2.49□□□□□ -2.01
SSU72YNL222W RAS2P01120 322 aaKnown RBP2.49□□□□□ -2.01
SSU72YNL222W YKL102CP34249 101 aa2.49□□□□□ -2.01
SSU72YNL222W RPL14AP36105 138 aaKnown RBP2.49□□□□□ -2.01
SSU72YNL222W YKR032WP36127 104 aa2.49□□□□□ -2.01
SSU72YNL222W YHR140WP38842 239 aa2.49□□□□□ -2.01
SSU72YNL222W YAR029WP39549 74 aa2.49□□□□□ -2.01
SSU72YNL222W YER084WP40057 128 aa2.49□□□□□ -2.01
SSU72YNL222W VMA21P41806 77 aa2.49□□□□□ -2.01
SSU72YNL222W CUP9P41817 306 aa2.49□□□□□ -2.01
SSU72YNL222W SMD3P43321 101 aaKnown RBP2.49□□□□□ -2.01
SSU72YNL222W TTI2P47168 421 aa2.49□□□□□ -2.01
SSU72YNL222W BAT2P47176 376 aaKnown RBP2.49□□□□□ -2.01
SSU72YNL222W RSM10Q03201 203 aa2.49□□□□□ -2.01
SSU72YNL222W LOA1Q06508 300 aa2.49□□□□□ -2.01
SSU72YNL222W YPR174CQ06616 221 aaPredicted RBP2.49□□□□□ -2.01
SSU72YNL222W FIT3Q08907 204 aa2.49□□□□□ -2.01
SSU72YNL222W ARO1P08566 1588 aaKnown RBP2.49□□□□□ -2.01
SSU72YNL222W YLR422WQ06409 1932 aa2.48□□□□□ -2.01
SSU72YNL222W YRF1-2P40105 1681 aa2.48□□□□□ -2.01
SSU72YNL222W COX5AP00424 153 aa2.48□□□□□ -2.01
SSU72YNL222W CPA1P07258 411 aaKnown RBP2.48□□□□□ -2.01
SSU72YNL222W RPS25BP0C0T4 108 aaKnown RBP2.48□□□□□ -2.01
SSU72YNL222W SNF4P12904 322 aa2.48□□□□□ -2.01
SSU72YNL222W RPL30P14120 105 aaKnown RBP2.48□□□□□ -2.01
SSU72YNL222W TFS1P14306 219 aa2.48□□□□□ -2.01
SSU72YNL222W YRA2P36036 203 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SSU72YNL222W ATG12P38316 186 aa2.48□□□□□ -2.01
SSU72YNL222W CAT5P41735 233 aa2.48□□□□□ -2.01
SSU72YNL222W YFR054CP43622 192 aa2.48□□□□□ -2.01
SSU72YNL222W GEP7P53171 287 aa2.48□□□□□ -2.01
SSU72YNL222W YNL033WP53964 284 aa2.48□□□□□ -2.01
SSU72YNL222W YNL019CP53975 284 aa2.48□□□□□ -2.01
SSU72YNL222W YPL039WQ03080 316 aa2.48□□□□□ -2.01
SSU72YNL222W SHH4Q06236 168 aa2.48□□□□□ -2.01
SSU72YNL222W KEI1Q06346 221 aa2.48□□□□□ -2.01
SSU72YNL222W PAU23Q07987 124 aa2.48□□□□□ -2.01
SSU72YNL222W YOR292CQ08743 309 aa2.48□□□□□ -2.01
SSU72YNL222W PRM3Q08931 133 aa2.48□□□□□ -2.01
SSU72YNL222W PAU17Q12370 124 aa2.48□□□□□ -2.01
SSU72YNL222W RPS25AQ3E792 108 aaPredicted RBP2.48□□□□□ -2.01
SSU72YNL222W YRF1-3P0CX14 1859 aa2.48□□□□□ -2.01
SSU72YNL222W YRF1-7P0CX15 1859 aa2.48□□□□□ -2.01
SSU72YNL222W YRF1-6P53819 1859 aa2.48□□□□□ -2.01
SSU72YNL222W PAN1P32521 1480 aa2.47□□□□□ -2.01
SSU72YNL222W ECM12O13529 151 aa2.47□□□□□ -2.01
SSU72YNL222W MBF1O14467 151 aaKnown RBP2.47□□□□□ -2.01
SSU72YNL222W ILV1P00927 576 aaKnown RBP2.47□□□□□ -2.01
SSU72YNL222W SPO13P23624 291 aa2.47□□□□□ -2.01
SSU72YNL222W ZRT1P32804 376 aa2.47□□□□□ -2.01
SSU72YNL222W VMA11P32842 164 aa2.47□□□□□ -2.01
SSU72YNL222W CSH1P38287 376 aa2.47□□□□□ -2.01
SSU72YNL222W MED6P38782 295 aa2.47□□□□□ -2.01
SSU72YNL222W YER134CP40081 178 aa2.47□□□□□ -2.01
SSU72YNL222W EAF6P47128 113 aa2.47□□□□□ -2.01
SSU72YNL222W AIM25P47140 327 aa2.47□□□□□ -2.01
SSU72YNL222W BXI1P48558 297 aa2.47□□□□□ -2.01
SSU72YNL222W SWS2P53937 143 aa2.47□□□□□ -2.01
SSU72YNL222W RGM1Q00453 211 aa2.47□□□□□ -2.01
SSU72YNL222W GAS3Q03655 524 aa2.47□□□□□ -2.01
SSU72YNL222W YMR082CQ04276 118 aa2.47□□□□□ -2.01
SSU72YNL222W YPR098CQ06089 161 aa2.47□□□□□ -2.01
SSU72YNL222W DGA1Q08650 418 aa2.47□□□□□ -2.01
SSU72YNL222W RRS1Q08746 203 aaKnown RBP2.47□□□□□ -2.01
SSU72YNL222W YOR097CQ12274 175 aaPredicted RBP2.47□□□□□ -2.01
SSU72YNL222W YLR412C-AQ3E742 68 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms