RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W RSM10Q03201 203 aa1.84□□□□□ -2.12
HRD3YLR207W YDR114CQ04597 100 aa1.84□□□□□ -2.12
HRD3YLR207W MRX8Q05473 314 aa1.84□□□□□ -2.12
HRD3YLR207W YTH1Q06102 208 aaPredicted RBP1.84□□□□□ -2.12
HRD3YLR207W REP2P03872 296 aa1.83□□□□□ -2.12
HRD3YLR207W RPL2AP0CX45 254 aaKnown RBP1.83□□□□□ -2.12
HRD3YLR207W RPL2BP0CX46 254 aaKnown RBP1.83□□□□□ -2.12
HRD3YLR207W BET1P22804 142 aa1.83□□□□□ -2.12
HRD3YLR207W RPB9P27999 122 aa1.83□□□□□ -2.12
HRD3YLR207W YBL010CP32788 280 aa1.83□□□□□ -2.12
HRD3YLR207W FLX1P40464 311 aa1.83□□□□□ -2.12
HRD3YLR207W MRPS16Q02608 121 aa1.83□□□□□ -2.12
HRD3YLR207W NEJ1Q06148 342 aa1.83□□□□□ -2.12
HRD3YLR207W FIT3Q08907 204 aa1.83□□□□□ -2.12
HRD3YLR207W YOR289WQ12012 251 aaPredicted RBP1.83□□□□□ -2.12
HRD3YLR207W TSC3Q3E790 80 aa1.83□□□□□ -2.12
HRD3YLR207W YLR361C-AQ3E795 98 aa1.83□□□□□ -2.12
HRD3YLR207W MRPS28P21771 286 aa1.83□□□□□ -2.12
HRD3YLR207W YER084WP40057 128 aa1.83□□□□□ -2.12
HRD3YLR207W PFS2P42841 465 aaKnown RBP1.83□□□□□ -2.12
HRD3YLR207W YFL051CP43552 160 aa1.83□□□□□ -2.12
HRD3YLR207W DOC1P53068 250 aa1.83□□□□□ -2.12
HRD3YLR207W YDL180WQ12301 547 aa1.83□□□□□ -2.12
HRD3YLR207W GEP5Q12393 293 aa1.83□□□□□ -2.12
HRD3YLR207W YOR032W-AQ8TGS1 66 aa1.83□□□□□ -2.12
HRD3YLR207W MSW1P04803 379 aa1.82□□□□□ -2.12
HRD3YLR207W CBP6P07253 162 aaPredicted RBP1.82□□□□□ -2.12
HRD3YLR207W YLR156WP0CE96 114 aa1.82□□□□□ -2.12
HRD3YLR207W YLR159WP0CE97 114 aa1.82□□□□□ -2.12
HRD3YLR207W YLR161WP0CE98 114 aa1.82□□□□□ -2.12
HRD3YLR207W URA5P13298 226 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W COX10P21592 462 aa1.82□□□□□ -2.12
HRD3YLR207W PRE7P23724 241 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W SUA7P29055 345 aaPredicted RBP1.82□□□□□ -2.12
HRD3YLR207W UTP30P36144 274 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W YEA4P40004 342 aa1.82□□□□□ -2.12
HRD3YLR207W RIO2P40160 425 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W DLS1P40366 167 aa1.82□□□□□ -2.12
HRD3YLR207W ALG9P53868 555 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W YGL041W-AP0C5N3 154 aa1.82□□□□□ -2.12
HRD3YLR207W UBI4P0CG63 381 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W SPO13P23624 291 aa1.82□□□□□ -2.12
HRD3YLR207W MRPL27P36526 146 aaPredicted RBP1.82□□□□□ -2.12
HRD3YLR207W RFC2P40348 353 aa1.82□□□□□ -2.12
HRD3YLR207W RPA43P46669 326 aa1.82□□□□□ -2.12
HRD3YLR207W GPI14P47088 403 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W RBL2P48606 106 aaKnown RBP1.82□□□□□ -2.12
HRD3YLR207W HAL1Q01766 294 aa1.82□□□□□ -2.12
HRD3YLR207W DYN2Q02647 92 aa1.82□□□□□ -2.12
HRD3YLR207W RCE1Q03530 315 aa1.82□□□□□ -2.12
HRD3YLR207W YOL014WQ08110 124 aa1.82□□□□□ -2.12
HRD3YLR207W PRR2Q12310 699 aa1.82□□□□□ -2.12
HRD3YLR207W SUS1Q6WNK7 96 aa1.82□□□□□ -2.12
HRD3YLR207W RPB3P16370 318 aaKnown RBP1.81□□□□□ -2.12
HRD3YLR207W OCH1P31755 480 aa1.81□□□□□ -2.12
HRD3YLR207W TMA19P35691 167 aaKnown RBP1.81□□□□□ -2.12
HRD3YLR207W HTD2P38790 280 aaKnown RBP1.81□□□□□ -2.12
HRD3YLR207W HPA3P39979 161 aa1.81□□□□□ -2.12
HRD3YLR207W SIP18P50263 79 aa1.81□□□□□ -2.12
HRD3YLR207W UBC7Q02159 165 aa1.81□□□□□ -2.12
HRD3YLR207W TMC1Q08422 150 aaPredicted RBP1.81□□□□□ -2.12
HRD3YLR207W ATG41Q12048 136 aa1.81□□□□□ -2.12
HRD3YLR207W YML100W-AQ8TGT0 57 aa1.81□□□□□ -2.12
HRD3YLR207W ODC2Q99297 307 aa1.81□□□□□ -2.12
HRD3YLR207W Q0255P03881 472 aa1.81□□□□□ -2.12
HRD3YLR207W HIS3P06633 220 aa1.81□□□□□ -2.12
HRD3YLR207W RPL43AP0CX25 92 aaKnown RBP1.81□□□□□ -2.12
HRD3YLR207W RPL43BP0CX26 92 aa1.81□□□□□ -2.12
HRD3YLR207W VMA11P32842 164 aa1.81□□□□□ -2.12
HRD3YLR207W SFK1P35735 353 aa1.81□□□□□ -2.12
HRD3YLR207W SHE2P36068 246 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
HRD3YLR207W CTR2P38865 189 aa1.81□□□□□ -2.12
HRD3YLR207W FCY21P40039 528 aa1.81□□□□□ -2.12
HRD3YLR207W YJL218WP40892 196 aaKnown RBP1.81□□□□□ -2.12
HRD3YLR207W SER2P42941 309 aa1.81□□□□□ -2.12
HRD3YLR207W YGL088WP53151 121 aa1.81□□□□□ -2.12
HRD3YLR207W PAU12P53343 120 aa1.81□□□□□ -2.12
HRD3YLR207W THI74Q04083 370 aa1.81□□□□□ -2.12
HRD3YLR207W UTP11P34247 250 aaPredicted RBP1.8□□□□□ -2.12
HRD3YLR207W PRS3P38689 320 aaKnown RBP1.8□□□□□ -2.12
HRD3YLR207W ARC15P40518 154 aaRIP-Chip data1.8□□□□□ -2.12not detected
HRD3YLR207W OST2P46964 130 aa1.8□□□□□ -2.12
HRD3YLR207W YAE1P47118 141 aaPredicted RBP1.8□□□□□ -2.12
HRD3YLR207W XPT1P47165 209 aa1.8□□□□□ -2.12
HRD3YLR207W SOL1P50278 321 aa1.8□□□□□ -2.12
HRD3YLR207W AIM36Q03798 255 aa1.8□□□□□ -2.12
HRD3YLR207W HUT1Q12520 339 aa1.8□□□□□ -2.12
HRD3YLR207W SLO1Q3E784 85 aa1.8□□□□□ -2.12
HRD3YLR207W RPL39P04650 51 aa1.8□□□□□ -2.12
HRD3YLR207W RPL30P14120 105 aaKnown RBP1.8□□□□□ -2.12
HRD3YLR207W AGA2P32781 87 aa1.8□□□□□ -2.12
HRD3YLR207W CLB6P32943 380 aa1.8□□□□□ -2.12
HRD3YLR207W UMP1P38293 148 aa1.8□□□□□ -2.12
HRD3YLR207W YBR220CP38318 560 aa1.8□□□□□ -2.12
HRD3YLR207W YHR125WP38831 101 aa1.8□□□□□ -2.12
HRD3YLR207W ERJ5P43613 295 aaPredicted RBP1.8□□□□□ -2.12
HRD3YLR207W TDA4P47153 279 aa1.8□□□□□ -2.12
HRD3YLR207W CCC1P47818 322 aa1.8□□□□□ -2.12
HRD3YLR207W DSK2P48510 373 aa1.8□□□□□ -2.12
HRD3YLR207W DIE2P50076 525 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms