RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeast

Gene HCR1, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCR1	YLR192C	STD1	Q02794	444 aa		4.59	□□□□□ -1.67
HCR1	YLR192C	ARL3	Q02804	198 aa		4.59	□□□□□ -1.67
HCR1	YLR192C	YMR007W	Q03675	126 aa		4.59	□□□□□ -1.67
HCR1	YLR192C	FRQ1	Q06389	190 aa		4.59	□□□□□ -1.67
HCR1	YLR192C	GEP5	Q12393	293 aa		4.59	□□□□□ -1.67
HCR1	YLR192C	YOS1	Q3E834	85 aa		4.59	□□□□□ -1.67
HCR1	YLR192C	FMP49	A0A023PZB3	126 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	TOM40	P23644	387 aa	Known RBP	4.58	□□□□□ -1.68
HCR1	YLR192C	YKL075C	P36083	450 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	AVT5	P38176	459 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	DFG10	P40526	253 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	SAS2	P40963	338 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	GPI2	P46961	280 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	ATG27	P46989	271 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	YJR015W	P47090	510 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	MIX17	Q03667	156 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	SHH3	Q04487	196 aa		4.58	□□□□□ -1.68
HCR1	YLR192C	POC4	Q12245	148 aa	Predicted RBP	4.58	□□□□□ -1.68
HCR1	YLR192C	RPL15A	P05748	204 aa	Known RBP	4.57	□□□□□ -1.68
HCR1	YLR192C	LST7	P53237	242 aa		4.57	□□□□□ -1.68
HCR1	YLR192C	LOA1	Q06508	300 aa		4.57	□□□□□ -1.68
HCR1	YLR192C	MCH1	Q07376	486 aa		4.57	□□□□□ -1.68
HCR1	YLR192C	CSI2	Q08054	341 aa		4.57	□□□□□ -1.68
HCR1	YLR192C	YLR302C	O13544	120 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	NOP1	P15646	327 aa	Known RBP	4.56	□□□□□ -1.68
HCR1	YLR192C	RNA15	P25299	296 aa	Predicted RBP	4.56	□□□□□ -1.68
HCR1	YLR192C	RAD23	P32628	398 aa	Known RBP	4.56	□□□□□ -1.68
HCR1	YLR192C	PMU1	P36069	295 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	MRPL28	P36527	147 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	YIP1	P53039	248 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	YGL185C	P53100	379 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	CRH1	P53301	507 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	CUE4	Q04201	117 aa	Predicted RBP	4.56	□□□□□ -1.68
HCR1	YLR192C	SMT3	Q12306	101 aa	Known RBP	4.56	□□□□□ -1.68
HCR1	YLR192C	DCN1	Q12395	269 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	COA6	Q3E846	104 aa		4.56	□□□□□ -1.68
HCR1	YLR192C	HTB1	P02293	131 aa	Known RBP	4.55	□□□□□ -1.68
HCR1	YLR192C	MRS3	P10566	314 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	HSP12	P22943	109 aa	Known RBP	4.55	□□□□□ -1.68
HCR1	YLR192C	SUA7	P29055	345 aa	Predicted RBP	4.55	□□□□□ -1.68
HCR1	YLR192C	ICS2	P38284	255 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	YAR068W	P39564	161 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	HIT1	P46973	164 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	CYT2	Q00873	224 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	NAT3	Q06504	195 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	LDS2	Q08218	356 aa		4.55	□□□□□ -1.68
HCR1	YLR192C	PAA1	Q12447	191 aa	Known RBP	4.55	□□□□□ -1.68
HCR1	YLR192C	PHO85	P17157	305 aa		4.54	□□□□□ -1.68
HCR1	YLR192C	YGL010W	P25338	174 aa		4.54	□□□□□ -1.68
HCR1	YLR192C	RPS2	P25443	254 aa	Known RBP	4.54	□□□□□ -1.68
HCR1	YLR192C	VMA11	P32842	164 aa		4.54	□□□□□ -1.68
HCR1	YLR192C	DSK2	P48510	373 aa		4.54	□□□□□ -1.68
HCR1	YLR192C	YMR317W	Q04893	1140 aa		4.54	□□□□□ -1.68
HCR1	YLR192C	PIS1	P06197	220 aa	Known RBP	4.53	□□□□□ -1.68
HCR1	YLR192C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
HCR1	YLR192C	SRP21	P32342	167 aa		4.53	□□□□□ -1.68
HCR1	YLR192C	YBL071C	P38185	102 aa		4.53	□□□□□ -1.68
HCR1	YLR192C	RPB11	P38902	120 aa		4.53	□□□□□ -1.68
HCR1	YLR192C	SDH7	Q04401	133 aa		4.53	□□□□□ -1.68
HCR1	YLR192C	YOR105W	Q08504	108 aa		4.53	□□□□□ -1.68
HCR1	YLR192C	YMR316C-A	I2HB70	103 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	ILV5	P06168	395 aa	Known RBP	4.52	□□□□□ -1.69
HCR1	YLR192C	RPB9	P27999	122 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	DAD2	P36162	133 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	CSH1	P38287	376 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	YHR173C	P38864	112 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	BDH1	P39714	382 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	ERV14	P53173	138 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	YHP1	Q04116	353 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	ATO3	Q12359	275 aa		4.52	□□□□□ -1.69
HCR1	YLR192C	COX2	P00410	251 aa		4.51	□□□□□ -1.69
HCR1	YLR192C	LST8	P41318	303 aa		4.51	□□□□□ -1.69
HCR1	YLR192C	YGR149W	P48236	432 aa		4.51	□□□□□ -1.69
HCR1	YLR192C	YNL234W	P53857	426 aa		4.51	□□□□□ -1.69
HCR1	YLR192C	ATP19	P81451	68 aa		4.51	□□□□□ -1.69
HCR1	YLR192C	MRX11	Q03079	207 aa		4.51	□□□□□ -1.69
HCR1	YLR192C	HMRA1	P0CY11	126 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	PHD1	P36093	366 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	YKR045C	P36138	183 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	MRPL11	P36521	249 aa	Predicted RBP	4.5	□□□□□ -1.69
HCR1	YLR192C	DOG2	P38773	246 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	DOG1	P38774	246 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	YIL163C	P40448	117 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	OST3	P48439	350 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	CPD1	P53314	239 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	NDE2	Q07500	545 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.5	□□□□□ -1.69
HCR1	YLR192C	YNR034W-A	Q3E841	98 aa		4.5	□□□□□ -1.69
HCR1	YLR192C	POR1	P04840	283 aa	Known RBP	4.49	□□□□□ -1.69
HCR1	YLR192C	MRPL44	P19956	98 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	YCR022C	P25620	114 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	QRI5	P32344	111 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	SFT2	P38166	215 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	SRP14	P38985	146 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	YER188W	P40103	239 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	YGR018C	P53211	109 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	FIT2	Q08906	153 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	YIL134C-A	Q45U18	67 aa		4.49	□□□□□ -1.69
HCR1	YLR192C	SOD1	P00445	154 aa	Known RBP	4.48	□□□□□ -1.69
HCR1	YLR192C	MRS1	P07266	363 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 114.1 ms