RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	GAL83	Q04739	417 aa		1.1	□□□□□ -2.23
RIC1	YLR039C	ANT1	Q06497	328 aa		1.1	□□□□□ -2.23
RIC1	YLR039C	ATP20	Q12233	115 aa		1.1	□□□□□ -2.23
RIC1	YLR039C	YCR023C	P25351	611 aa		1.09	□□□□□ -2.23
RIC1	YLR039C	TTI2	P47168	421 aa		1.09	□□□□□ -2.23
RIC1	YLR039C	YGL235W	P53071	178 aa		1.09	□□□□□ -2.23
RIC1	YLR039C	SAY1	P53324	424 aa		1.09	□□□□□ -2.23
RIC1	YLR039C	CUE4	Q04201	117 aa	Predicted RBP	1.09	□□□□□ -2.23
RIC1	YLR039C	UTP20	P35194	2493 aa	Known RBP	1.09	□□□□□ -2.23
RIC1	YLR039C	PEX34	P25584	144 aa		1.09	□□□□□ -2.24
RIC1	YLR039C	FES1	P38260	290 aa		1.09	□□□□□ -2.24
RIC1	YLR039C	CUP9	P41817	306 aa		1.09	□□□□□ -2.24
RIC1	YLR039C	SHH3	Q04487	196 aa		1.09	□□□□□ -2.24
RIC1	YLR039C	YHL018W	P38744	120 aa	Predicted RBP	1.08	□□□□□ -2.24
RIC1	YLR039C	AIM18	P38884	321 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	TMA22	P47089	198 aa	Predicted RBP	1.08	□□□□□ -2.24
RIC1	YLR039C	YLR412C-A	Q3E742	68 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	TFC1	P32367	649 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	BAT2	P47176	376 aa	Known RBP	1.08	□□□□□ -2.24
RIC1	YLR039C	FIT2	Q08906	153 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	YOR097C	Q12274	175 aa	Predicted RBP	1.08	□□□□□ -2.24
RIC1	YLR039C	RDI1	Q12434	202 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	PHO13	P19881	312 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	SRX1	P36077	127 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	LDB18	Q07887	179 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	YPR013C	Q12145	317 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	UBR1	P19812	1950 aa		1.08	□□□□□ -2.24
RIC1	YLR039C	QCR2	P07257	368 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	STP22	P25604	385 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	UBC6	P33296	250 aa	Predicted RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	TMA19	P35691	167 aa	Known RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	RRT1	P38192	103 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	SLM6	P38343	150 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	THI74	Q04083	370 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	YPR202W	Q08993	238 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	COX8	P04039	78 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	CMD1	P06787	147 aa	Known RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	RPL2A	P0CX45	254 aa	Known RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	RPL2B	P0CX46	254 aa	Known RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	NMT1	P14743	455 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	YBR220C	P38318	560 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	EDC3	P39998	551 aa	Known RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	YER135C	P40082	130 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	YPR114W	Q06107	315 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	YPR174C	Q06616	221 aa	Predicted RBP	1.07	□□□□□ -2.24
RIC1	YLR039C	YOR214C	Q12282	236 aa		1.07	□□□□□ -2.24
RIC1	YLR039C	NSA2	P40078	261 aa	Known RBP	1.06	□□□□□ -2.24
RIC1	YLR039C	THG1	P53215	237 aa	Known RBP	1.06	□□□□□ -2.24
RIC1	YLR039C	ORM1	P53224	222 aa		1.06	□□□□□ -2.24
RIC1	YLR039C	PRP11	Q07350	266 aa	Predicted RBP	1.06	□□□□□ -2.24
RIC1	YLR039C	QCR8	P08525	94 aa		1.06	□□□□□ -2.24
RIC1	YLR039C	UBI4	P0CG63	381 aa	Known RBP	1.05	□□□□□ -2.24
RIC1	YLR039C	RPS1A	P33442	255 aa	Known RBP	1.05	□□□□□ -2.24
RIC1	YLR039C	UPS2	P35200	230 aa		1.05	□□□□□ -2.24
RIC1	YLR039C	DER1	P38307	211 aa		1.05	□□□□□ -2.24
RIC1	YLR039C	YIL046W-A	Q3E7Z4	54 aa		1.05	□□□□□ -2.24
RIC1	YLR039C	RPS28B	P0C0X0	67 aa	Known RBP	1.05	□□□□□ -2.24
RIC1	YLR039C	YGL101W	P53144	215 aa		1.05	□□□□□ -2.24
RIC1	YLR039C	MPA43	P53583	542 aa	Predicted RBP	1.05	□□□□□ -2.24
RIC1	YLR039C	DAD4	P69851	72 aa		1.05	□□□□□ -2.24
RIC1	YLR039C	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.05	□□□□□ -2.24
RIC1	YLR039C	ACC1	Q00955	2233 aa	Known RBP	1.04	□□□□□ -2.24
RIC1	YLR039C	SUA7	P29055	345 aa	Predicted RBP	1.04	□□□□□ -2.24
RIC1	YLR039C	YKR005C	Q02203	525 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YPR127W	Q06494	345 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YLR053C	Q12026	108 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YLR046C	Q12253	270 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YOL162W	P0CF19	215 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	GPA2	P10823	449 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YGL010W	P25338	174 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	FIG1	P38224	298 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YEL028W	P39989	153 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YIL086C	P40503	102 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	NHP10	Q03435	203 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	PLP1	Q04004	230 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	RIM9	Q04734	239 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	TEL1	P38110	2787 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	HSP30	P25619	332 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YEL073C	P39974	107 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	PIR1	Q03178	341 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	UPS1	Q05776	175 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YOR015W	Q12169	119 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	YOR381W-A	Q3E804	55 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	PET20	Q99373	253 aa		1.04	□□□□□ -2.24
RIC1	YLR039C	GSP2	P32836	220 aa	Known RBP	1.03	□□□□□ -2.24
RIC1	YLR039C	YEL008W	P40001	126 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	GIM4	P40005	111 aa	Known RBP	1.03	□□□□□ -2.24
RIC1	YLR039C	RPL13B	P40212	199 aa	Known RBP	1.03	□□□□□ -2.24
RIC1	YLR039C	APS3	P47064	194 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	VPS28	Q02767	242 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	NSL1	Q12143	216 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	RPL13A	Q12690	199 aa	Predicted RBP	1.03	□□□□□ -2.24
RIC1	YLR039C	SLH1	P53327	1967 aa	Known RBP	1.03	□□□□□ -2.24
RIC1	YLR039C	RPL43A	P0CX25	92 aa	Known RBP	1.03	□□□□□ -2.24
RIC1	YLR039C	RPL43B	P0CX26	92 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	CYC2	P38909	366 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	MPM1	P40364	252 aa		1.03	□□□□□ -2.24
RIC1	YLR039C	ECM31	P38122	312 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	GLR1	P41921	483 aa	Known RBP	1.02	□□□□□ -2.25
RIC1	YLR039C	SBH2	P52871	88 aa		1.02	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms