RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W SNU13P39990 126 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YER188WP40103 239 aa1.77□□□□□ -2.13
SNU114YKL173W YGL262WP53054 175 aa1.77□□□□□ -2.13
SNU114YKL173W SMT3Q12306 101 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W TSC3Q3E790 80 aa1.77□□□□□ -2.13
SNU114YKL173W YEL045CP32616 141 aa1.77□□□□□ -2.13
SNU114YKL173W UTP30P36144 274 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YHR130CP38834 111 aa1.77□□□□□ -2.13
SNU114YKL173W GEP7P53171 287 aa1.77□□□□□ -2.13
SNU114YKL173W SMD1Q02260 146 aaPredicted RBP1.77□□□□□ -2.13
SNU114YKL173W NIP7Q08962 181 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YPL264CQ08980 353 aa1.77□□□□□ -2.13
SNU114YKL173W HUT1Q12520 339 aa1.77□□□□□ -2.13
SNU114YKL173W REP2P03872 296 aa1.77□□□□□ -2.13
SNU114YKL173W CKS1P20486 150 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W HYP2P23301 157 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W CTR2P38865 189 aa1.77□□□□□ -2.13
SNU114YKL173W YJL218WP40892 196 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YNR062CP53748 327 aa1.77□□□□□ -2.13
SNU114YKL173W YPL162CQ12042 273 aa1.77□□□□□ -2.13
SNU114YKL173W SPC3Q12133 184 aa1.77□□□□□ -2.13
SNU114YKL173W FCY1Q12178 158 aa1.77□□□□□ -2.13
SNU114YKL173W YPR014CQ6B0W2 109 aa1.77□□□□□ -2.13
SNU114YKL173W SGA1P08019 549 aa1.76□□□□□ -2.13
SNU114YKL173W PEX4P29340 183 aa1.76□□□□□ -2.13
SNU114YKL173W GAA1P39012 614 aa1.76□□□□□ -2.13
SNU114YKL173W YAR029WP39549 74 aa1.76□□□□□ -2.13
SNU114YKL173W MPM1P40364 252 aa1.76□□□□□ -2.13
SNU114YKL173W TIM13P53299 105 aa1.76□□□□□ -2.13
SNU114YKL173W SAY1P53324 424 aa1.76□□□□□ -2.13
SNU114YKL173W FCF1Q05498 189 aaPredicted RBP1.76□□□□□ -2.13
SNU114YKL173W FMP27Q06179 2628 aa1.76□□□□□ -2.13
SNU114YKL173W ATP5P09457 212 aa1.76□□□□□ -2.13
SNU114YKL173W TIR1P10863 254 aa1.76□□□□□ -2.13
SNU114YKL173W NSE4P43124 402 aa1.76□□□□□ -2.13
SNU114YKL173W YGL230CP53074 147 aa1.76□□□□□ -2.13
SNU114YKL173W TVP15Q03860 143 aa1.76□□□□□ -2.13
SNU114YKL173W YER189WP40104 122 aa1.75□□□□□ -2.13
SNU114YKL173W SMD3P43321 101 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W BUD25P85052 153 aa1.75□□□□□ -2.13
SNU114YKL173W ELC1Q03071 99 aa1.75□□□□□ -2.13
SNU114YKL173W MCP1Q12106 302 aa1.75□□□□□ -2.13
SNU114YKL173W YFR032C-BQ8TGU2 87 aa1.75□□□□□ -2.13
SNU114YKL173W GCN1P33892 2672 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W YEL009C-AA0A023PZF2 135 aa1.75□□□□□ -2.13
SNU114YKL173W FYV4P38783 130 aaPredicted RBP1.75□□□□□ -2.13
SNU114YKL173W TEM1P38987 245 aa1.75□□□□□ -2.13
SNU114YKL173W YEL075CP39972 122 aa1.75□□□□□ -2.13
SNU114YKL173W YIL059CP40520 121 aa1.75□□□□□ -2.13
SNU114YKL173W CUP9P41817 306 aa1.75□□□□□ -2.13
SNU114YKL173W GPI2P46961 280 aa1.75□□□□□ -2.13
SNU114YKL173W BAT2P47176 376 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W SBH1P52870 82 aa1.75□□□□□ -2.13
SNU114YKL173W CAX4P53223 239 aa1.75□□□□□ -2.13
SNU114YKL173W YMR252CQ04814 134 aa1.75□□□□□ -2.13
SNU114YKL173W SML1Q04964 104 aa1.75□□□□□ -2.13
SNU114YKL173W YOR376W-AQ3E805 51 aa1.75□□□□□ -2.13
SNU114YKL173W DDP1Q99321 188 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W ACC1Q00955 2233 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W ADE6P38972 1358 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W NOP1P15646 327 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W RPB3P16370 318 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W SRP21P32342 167 aa1.74□□□□□ -2.13
SNU114YKL173W CCS1P40202 249 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W YIL054WP40524 105 aa1.74□□□□□ -2.13
SNU114YKL173W YCL001W-AP87012 153 aa1.74□□□□□ -2.13
SNU114YKL173W YDR102CQ03864 110 aa1.74□□□□□ -2.13
SNU114YKL173W RAD28Q12021 506 aa1.74□□□□□ -2.13
SNU114YKL173W YLR412C-AQ3E742 68 aa1.74□□□□□ -2.13
SNU114YKL173W DDR48P18899 430 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W HSP12P22943 109 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W LSM2P38203 95 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W HPA3P39979 161 aa1.74□□□□□ -2.13
SNU114YKL173W GTT1P40582 234 aa1.74□□□□□ -2.13
SNU114YKL173W PAM16P42949 149 aa1.74□□□□□ -2.13
SNU114YKL173W YFL019CP43576 117 aa1.74□□□□□ -2.13
SNU114YKL173W ALG9P53868 555 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W LPP1Q04396 274 aa1.74□□□□□ -2.13
SNU114YKL173W UIP4Q08926 304 aa1.74□□□□□ -2.13
SNU114YKL173W BOL1Q3E793 110 aa1.74□□□□□ -2.13
SNU114YKL173W TDA8Q6B2U8 126 aa1.74□□□□□ -2.13
SNU114YKL173W LAA1P39526 2014 aa1.74□□□□□ -2.13
SNU114YKL173W HSP26P15992 214 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SNU114YKL173W MRS4P23500 304 aa1.74□□□□□ -2.13
SNU114YKL173W YBR090CP38253 122 aa1.74□□□□□ -2.13
SNU114YKL173W SPC25P40014 221 aa1.74□□□□□ -2.13
SNU114YKL173W YER134CP40081 178 aa1.74□□□□□ -2.13
SNU114YKL173W TIF34P40217 347 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W PFS2P42841 465 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W YMR103CQ04436 120 aa1.74□□□□□ -2.13
SNU114YKL173W PST1Q12355 444 aa1.74□□□□□ -2.13
SNU114YKL173W KTI11Q3E840 82 aa1.74□□□□□ -2.13
SNU114YKL173W AUS1Q08409 1394 aa1.74□□□□□ -2.13
SNU114YKL173W SCM4P32564 187 aa1.73□□□□□ -2.13
SNU114YKL173W UTH1P36135 365 aa1.73□□□□□ -2.13
SNU114YKL173W ECM34P38728 170 aa1.73□□□□□ -2.13
SNU114YKL173W AVT2P39981 480 aa1.73□□□□□ -2.13
SNU114YKL173W YFR045WP43617 309 aa1.73□□□□□ -2.13
SNU114YKL173W YPR174CQ06616 221 aaPredicted RBP1.73□□□□□ -2.13
SNU114YKL173W ATG10Q07879 167 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms