RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDH1	YKL085W	PHD1	P36093	366 aa		4.71	□□□□□ -1.66
MDH1	YKL085W	YIR035C	P40579	254 aa		4.71	□□□□□ -1.66
MDH1	YKL085W	TAD2	P47058	250 aa		4.71	□□□□□ -1.66
MDH1	YKL085W	LST7	P53237	242 aa		4.71	□□□□□ -1.66
MDH1	YKL085W	POS5	Q06892	414 aa		4.71	□□□□□ -1.66
MDH1	YKL085W	CDC7	P06243	507 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	ZRC1	P20107	442 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	RTC3	P38804	111 aa	Predicted RBP	4.7	□□□□□ -1.66
MDH1	YKL085W	MBB1	P39534	108 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	MIG3	P39943	394 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	YER135C	P40082	130 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	PNC1	P53184	216 aa	Known RBP	4.7	□□□□□ -1.66
MDH1	YKL085W	SGF11	Q03067	99 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	YPL264C	Q08980	353 aa		4.7	□□□□□ -1.66
MDH1	YKL085W	FCF2	Q12035	217 aa	Predicted RBP	4.7	□□□□□ -1.66
MDH1	YKL085W	TPI1	P00942	248 aa	Known RBP	4.69	□□□□□ -1.66
MDH1	YKL085W	UBI4	P0CG63	381 aa	Known RBP	4.69	□□□□□ -1.66
MDH1	YKL085W	CNB1	P25296	175 aa		4.69	□□□□□ -1.66
MDH1	YKL085W	YCR001W	P25347	104 aa		4.69	□□□□□ -1.66
MDH1	YKL085W	EMP24	P32803	203 aa	Known RBP	4.69	□□□□□ -1.66
MDH1	YKL085W	HST4	P53688	370 aa		4.69	□□□□□ -1.66
MDH1	YKL085W	ZEO1	Q08245	113 aa		4.69	□□□□□ -1.66
MDH1	YKL085W	COA2	Q3E823	68 aa		4.69	□□□□□ -1.66
MDH1	YKL085W	FCY2	P17064	533 aa		4.68	□□□□□ -1.66
MDH1	YKL085W	AIM24	P47127	394 aa		4.68	□□□□□ -1.66
MDH1	YKL085W	SNN1	P48232	102 aa		4.68	□□□□□ -1.66
MDH1	YKL085W	YIF1	P53845	314 aa	Known RBP	4.68	□□□□□ -1.66
MDH1	YKL085W	YOL160W	Q08321	113 aa		4.68	□□□□□ -1.66
MDH1	YKL085W	AIM45	Q12480	344 aa	Known RBP	4.68	□□□□□ -1.66
MDH1	YKL085W	YLR146W-A	Q2V2P1	62 aa		4.68	□□□□□ -1.66
MDH1	YKL085W	YMR316C-A	I2HB70	103 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	SEC22	P22214	214 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	GPI15	P53961	229 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	ODC1	Q03028	310 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	SDH7	Q04401	133 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	YPR195C	Q06594	109 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	BER1	Q06688	274 aa	Known RBP	4.67	□□□□□ -1.66
MDH1	YKL085W	SDO1	Q07953	250 aa	Known RBP	4.67	□□□□□ -1.66
MDH1	YKL085W	YPL162C	Q12042	273 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	AYT1	Q12226	474 aa		4.67	□□□□□ -1.66
MDH1	YKL085W	RPL2A	P0CX45	254 aa	Known RBP	4.66	□□□□□ -1.66
MDH1	YKL085W	RPL2B	P0CX46	254 aa	Known RBP	4.66	□□□□□ -1.66
MDH1	YKL085W	RPS11A	P0CX47	156 aa	Known RBP	4.66	□□□□□ -1.66
MDH1	YKL085W	RPS11B	P0CX48	156 aa	Known RBP	4.66	□□□□□ -1.66
MDH1	YKL085W	TIP1	P27654	210 aa	Predicted RBP	4.66	□□□□□ -1.66
MDH1	YKL085W	POG1	P40473	351 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	EMC5	P40540	141 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	YJR015W	P47090	510 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	YJR111C	P47148	283 aa	Known RBP	4.66	□□□□□ -1.66
MDH1	YKL085W	PKP2	P53170	491 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	HHO1	P53551	258 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	YCL001W-A	P87012	153 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	UBC7	Q02159	165 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	YPR063C	Q12160	140 aa		4.66	□□□□□ -1.66
MDH1	YKL085W	RPS25B	P0C0T4	108 aa	Known RBP	4.65	□□□□□ -1.67
MDH1	YKL085W	YCR025C	P25352	136 aa		4.65	□□□□□ -1.67
MDH1	YKL085W	MSK1	P32048	576 aa		4.65	□□□□□ -1.67
MDH1	YKL085W	PDR17	P53844	350 aa		4.65	□□□□□ -1.67
MDH1	YKL085W	MRPS17	Q03246	237 aa	Predicted RBP	4.65	□□□□□ -1.67
MDH1	YKL085W	IZH1	Q03419	316 aa		4.65	□□□□□ -1.67
MDH1	YKL085W	ERP1	Q05359	219 aa	Known RBP	4.65	□□□□□ -1.67
MDH1	YKL085W	LOA1	Q06508	300 aa		4.65	□□□□□ -1.67
MDH1	YKL085W	RPS25A	Q3E792	108 aa	Predicted RBP	4.65	□□□□□ -1.67
MDH1	YKL085W	VMA9	Q3E7B6	73 aa		4.65	□□□□□ -1.67
MDH1	YKL085W	AQY1	P0CD91	305 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	SHB17	P36136	271 aa	Known RBP	4.64	□□□□□ -1.67
MDH1	YKL085W	SFT2	P38166	215 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	LSM2	P38203	95 aa	Known RBP	4.64	□□□□□ -1.67
MDH1	YKL085W	YBR292C	P38357	123 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	PGD1	P40356	397 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	YIL024C	P40543	189 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	MOG1	P47123	218 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	MCM22	P47167	239 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	CAF40	P53829	373 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	FMP41	P53889	259 aa	Known RBP	4.64	□□□□□ -1.67
MDH1	YKL085W	YMR090W	Q04304	227 aa	Known RBP	4.64	□□□□□ -1.67
MDH1	YKL085W	RRT7	Q07829	113 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	PCC1	Q3E833	88 aa		4.64	□□□□□ -1.67
MDH1	YKL085W	SAL1	D6W196	494 aa		4.63	□□□□□ -1.67
MDH1	YKL085W	YEA6	P39953	335 aa		4.63	□□□□□ -1.67
MDH1	YKL085W	YEA4	P40004	342 aa		4.63	□□□□□ -1.67
MDH1	YKL085W	SPC25	P40014	221 aa		4.63	□□□□□ -1.67
MDH1	YKL085W	YGR269W	P40326	108 aa		4.63	□□□□□ -1.67
MDH1	YKL085W	YNR066C	P53752	436 aa		4.63	□□□□□ -1.67
MDH1	YKL085W	SNU23	Q12368	194 aa	Predicted RBP	4.63	□□□□□ -1.67
MDH1	YKL085W	ACP1	P32463	125 aa		4.62	□□□□□ -1.67
MDH1	YKL085W	SLM6	P38343	150 aa		4.62	□□□□□ -1.67
MDH1	YKL085W	PRE5	P40302	234 aa	Known RBP	4.62	□□□□□ -1.67
MDH1	YKL085W	CCW12	Q12127	133 aa		4.62	□□□□□ -1.67
MDH1	YKL085W	MIC27	P50945	234 aa		4.61	□□□□□ -1.67
MDH1	YKL085W	BOR1	P53838	576 aa		4.61	□□□□□ -1.67
MDH1	YKL085W	TMA23	Q03525	211 aa		4.61	□□□□□ -1.67
MDH1	YKL085W	DDI2	P0CH63	225 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	DDI3	P0CH64	225 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	TIR2	P33890	251 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	RIB5	P38145	238 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	YHR022C	P38763	256 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	GTT1	P40582	234 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	SHH3	Q04487	196 aa		4.6	□□□□□ -1.67
MDH1	YKL085W	YLR179C	Q06252	201 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms