RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C GTT1P40582 234 aa2.35□□□□□ -2.03
ATG27YJL178C HIT1P46973 164 aa2.35□□□□□ -2.03
ATG27YJL178C YGL114WP53134 725 aa2.35□□□□□ -2.03
ATG27YJL178C TIM21P53220 239 aa2.35□□□□□ -2.03
ATG27YJL178C CTR3Q06686 241 aa2.35□□□□□ -2.03
ATG27YJL178C PAM18Q07914 168 aa2.35□□□□□ -2.03
ATG27YJL178C SME1Q12330 94 aaPredicted RBP2.35□□□□□ -2.03
ATG27YJL178C RPS25AQ3E792 108 aaPredicted RBP2.35□□□□□ -2.03
ATG27YJL178C YDR157WA0A023PZE8 133 aa2.34□□□□□ -2.03
ATG27YJL178C YMR316C-AI2HB70 103 aa2.34□□□□□ -2.03
ATG27YJL178C ADH3P07246 375 aaKnown RBP2.34□□□□□ -2.03
ATG27YJL178C PAU1P0CE88 120 aa2.34□□□□□ -2.03
ATG27YJL178C PAU14P0CE89 120 aa2.34□□□□□ -2.03
ATG27YJL178C PAU6P0CE90 120 aa2.34□□□□□ -2.03
ATG27YJL178C PAU18P0CE91 120 aa2.34□□□□□ -2.03
ATG27YJL178C PAU8P0CE92 120 aa2.34□□□□□ -2.03
ATG27YJL178C PAU11P0CE93 120 aa2.34□□□□□ -2.03
ATG27YJL178C SPS100P13130 326 aa2.34□□□□□ -2.03
ATG27YJL178C DAL80P26343 269 aa2.34□□□□□ -2.03
ATG27YJL178C CPR5P35176 225 aa2.34□□□□□ -2.03
ATG27YJL178C YKR045CP36138 183 aa2.34□□□□□ -2.03
ATG27YJL178C YBR220CP38318 560 aa2.34□□□□□ -2.03
ATG27YJL178C TRS20P38334 175 aa2.34□□□□□ -2.03
ATG27YJL178C SHG1P38337 142 aa2.34□□□□□ -2.03
ATG27YJL178C YBR292CP38357 123 aa2.34□□□□□ -2.03
ATG27YJL178C PAU13P38725 120 aa2.34□□□□□ -2.03
ATG27YJL178C ECM14P38836 430 aa2.34□□□□□ -2.03
ATG27YJL178C HUA1P40325 198 aa2.34□□□□□ -2.03
ATG27YJL178C PHS1P40857 217 aa2.34□□□□□ -2.03
ATG27YJL178C LOC1P43586 204 aaPredicted RBP2.34□□□□□ -2.03
ATG27YJL178C YJR015WP47090 510 aa2.34□□□□□ -2.03
ATG27YJL178C MOG1P47123 218 aa2.34□□□□□ -2.03
ATG27YJL178C TTI2P47168 421 aa2.34□□□□□ -2.03
ATG27YJL178C ERG25P53045 309 aa2.34□□□□□ -2.03
ATG27YJL178C PAU4P53427 120 aa2.34□□□□□ -2.03
ATG27YJL178C PAU10Q03050 120 aa2.34□□□□□ -2.03
ATG27YJL178C SEN15Q04675 128 aa2.34□□□□□ -2.03
ATG27YJL178C FRQ1Q06389 190 aa2.34□□□□□ -2.03
ATG27YJL178C HRD1Q08109 551 aa2.34□□□□□ -2.03
ATG27YJL178C PAU20Q08322 120 aa2.34□□□□□ -2.03
ATG27YJL178C SNU23Q12368 194 aaPredicted RBP2.34□□□□□ -2.03
ATG27YJL178C PAU9Q3E770 120 aa2.34□□□□□ -2.03
ATG27YJL178C VPS63O13549 108 aa2.33□□□□□ -2.04
ATG27YJL178C RPL9AP05738 191 aaKnown RBP2.33□□□□□ -2.04
ATG27YJL178C RPS23AP0CX29 145 aaKnown RBP2.33□□□□□ -2.04
ATG27YJL178C RPS23BP0CX30 145 aa2.33□□□□□ -2.04
ATG27YJL178C YMR31P19955 123 aa2.33□□□□□ -2.04
ATG27YJL178C RAD23P32628 398 aaKnown RBP2.33□□□□□ -2.04
ATG27YJL178C ALK2P32789 676 aaPredicted RBP2.33□□□□□ -2.04
ATG27YJL178C YKL187CP34231 750 aa2.33□□□□□ -2.04
ATG27YJL178C YBR090CP38253 122 aa2.33□□□□□ -2.04
ATG27YJL178C YGP1P38616 354 aaKnown RBP2.33□□□□□ -2.04
ATG27YJL178C YIL163CP40448 117 aa2.33□□□□□ -2.04
ATG27YJL178C PAU15P40585 124 aa2.33□□□□□ -2.04
ATG27YJL178C SMD3P43321 101 aaKnown RBP2.33□□□□□ -2.04
ATG27YJL178C DSK2P48510 373 aa2.33□□□□□ -2.04
ATG27YJL178C YPL067CQ02754 198 aa2.33□□□□□ -2.04
ATG27YJL178C ARL3Q02804 198 aa2.33□□□□□ -2.04
ATG27YJL178C YMR244WQ04018 355 aa2.33□□□□□ -2.04
ATG27YJL178C LPP1Q04396 274 aa2.33□□□□□ -2.04
ATG27YJL178C YPD1Q07688 167 aa2.33□□□□□ -2.04
ATG27YJL178C YOL024WQ08172 172 aa2.33□□□□□ -2.04
ATG27YJL178C YLR118CQ12354 227 aa2.33□□□□□ -2.04
ATG27YJL178C ATO3Q12359 275 aa2.33□□□□□ -2.04
ATG27YJL178C YCL048W-AQ2V2Q2 79 aa2.33□□□□□ -2.04
ATG27YJL178C COX10P21592 462 aa2.32□□□□□ -2.04
ATG27YJL178C SPS18P32572 300 aa2.32□□□□□ -2.04
ATG27YJL178C DER1P38307 211 aa2.32□□□□□ -2.04
ATG27YJL178C YHR138CP38841 114 aaPredicted RBP2.32□□□□□ -2.04
ATG27YJL178C YJL118WP47022 219 aa2.32□□□□□ -2.04
ATG27YJL178C RIB4P50861 169 aaPredicted RBP2.32□□□□□ -2.04
ATG27YJL178C YGL185CP53100 379 aa2.32□□□□□ -2.04
ATG27YJL178C HST4P53688 370 aa2.32□□□□□ -2.04
ATG27YJL178C SHH3Q04487 196 aa2.32□□□□□ -2.04
ATG27YJL178C YLR179CQ06252 201 aaKnown RBP2.32□□□□□ -2.04
ATG27YJL178C FCY1Q12178 158 aa2.32□□□□□ -2.04
ATG27YJL178C GEP5Q12393 293 aa2.32□□□□□ -2.04
ATG27YJL178C YGL258W-AQ3E740 77 aa2.32□□□□□ -2.04
ATG27YJL178C HTB1P02293 131 aaKnown RBP2.31□□□□□ -2.04
ATG27YJL178C PET494P07390 489 aaPredicted RBP2.31□□□□□ -2.04
ATG27YJL178C SEC59P20048 519 aa2.31□□□□□ -2.04
ATG27YJL178C QCR9P22289 66 aa2.31□□□□□ -2.04
ATG27YJL178C MRPL28P36527 147 aa2.31□□□□□ -2.04
ATG27YJL178C SRP14P38985 146 aa2.31□□□□□ -2.04
ATG27YJL178C YER121WP40076 114 aa2.31□□□□□ -2.04
ATG27YJL178C NSA2P40078 261 aaKnown RBP2.31□□□□□ -2.04
ATG27YJL178C RPL9BP51401 191 aaKnown RBP2.31□□□□□ -2.04
ATG27YJL178C MGA1P53050 456 aa2.31□□□□□ -2.04
ATG27YJL178C DAD3P69850 94 aa2.31□□□□□ -2.04
ATG27YJL178C YMR166CQ03829 368 aa2.31□□□□□ -2.04
ATG27YJL178C NAT3Q06504 195 aa2.31□□□□□ -2.04
ATG27YJL178C LOA1Q06508 300 aa2.31□□□□□ -2.04
ATG27YJL178C YPR195CQ06594 109 aa2.31□□□□□ -2.04
ATG27YJL178C PRP11Q07350 266 aaPredicted RBP2.31□□□□□ -2.04
ATG27YJL178C ZEO1Q08245 113 aa2.31□□□□□ -2.04
ATG27YJL178C IRC23Q08416 157 aa2.31□□□□□ -2.04
ATG27YJL178C BPH1P25356 2167 aa2.31□□□□□ -2.04
ATG27YJL178C RPL18AP0CX49 186 aaKnown RBP2.3□□□□□ -2.04
ATG27YJL178C RPL18BP0CX50 186 aaKnown RBP2.3□□□□□ -2.04
ATG27YJL178C NHP6AP11632 93 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms