RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C AYT1Q12226 474 aa2.68□□□□□ -1.98
VPS53YJL029C SAR1P20606 190 aaKnown RBP2.68□□□□□ -1.98
VPS53YJL029C TIP1P27654 210 aaPredicted RBP2.68□□□□□ -1.98
VPS53YJL029C SHG1P38337 142 aa2.68□□□□□ -1.98
VPS53YJL029C ASP1P38986 381 aaPredicted RBP2.68□□□□□ -1.98
VPS53YJL029C GLE2P40066 365 aa2.68□□□□□ -1.98
VPS53YJL029C PHO23P50947 330 aa2.68□□□□□ -1.98
VPS53YJL029C ODC1Q03028 310 aa2.68□□□□□ -1.98
VPS53YJL029C FCF2Q12035 217 aaPredicted RBP2.68□□□□□ -1.98
VPS53YJL029C MAG1P22134 296 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C AHT1P29589 182 aa2.67□□□□□ -1.98
VPS53YJL029C SMD3P43321 101 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C IZH1Q03419 316 aa2.67□□□□□ -1.98
VPS53YJL029C MRPS8Q03799 155 aa2.67□□□□□ -1.98
VPS53YJL029C YMR244WQ04018 355 aa2.67□□□□□ -1.98
VPS53YJL029C UBI4P0CG63 381 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C RPS11AP0CX47 156 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C RPS11BP0CX48 156 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C EMP24P32803 203 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C YRA2P36036 203 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
VPS53YJL029C SPC25P40014 221 aa2.67□□□□□ -1.98
VPS53YJL029C SPI1P40092 148 aa2.67□□□□□ -1.98
VPS53YJL029C MRPL50P53724 139 aa2.67□□□□□ -1.98
VPS53YJL029C ERG27Q12452 347 aaKnown RBP2.67□□□□□ -1.98
VPS53YJL029C RPL2AP0CX45 254 aaKnown RBP2.66□□□□□ -1.98
VPS53YJL029C RPL2BP0CX46 254 aaKnown RBP2.66□□□□□ -1.98
VPS53YJL029C HSP12P22943 109 aaKnown RBP2.66□□□□□ -1.98
VPS53YJL029C VMA22P38784 181 aa2.66□□□□□ -1.98
VPS53YJL029C GCV3P39726 170 aaPredicted RBP2.66□□□□□ -1.98
VPS53YJL029C SIM1P40472 476 aa2.66□□□□□ -1.98
VPS53YJL029C ATC1Q04005 294 aa2.66□□□□□ -1.98
VPS53YJL029C VAM10Q08474 114 aa2.66□□□□□ -1.98
VPS53YJL029C UTP23Q12339 254 aaKnown RBP2.66□□□□□ -1.98
VPS53YJL029C YER175W-AQ8TGU4 54 aa2.66□□□□□ -1.98
VPS53YJL029C MDN1Q12019 4910 aaKnown RBP2.66□□□□□ -1.98
VPS53YJL029C MRS1P07266 363 aa2.66□□□□□ -1.98
VPS53YJL029C DFR1P07807 211 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
VPS53YJL029C GCN3P14741 305 aa2.66□□□□□ -1.98
VPS53YJL029C TIR2P33890 251 aa2.66□□□□□ -1.98
VPS53YJL029C ATG27P46989 271 aa2.66□□□□□ -1.98
VPS53YJL029C SNX4P47057 423 aa2.66□□□□□ -1.98
VPS53YJL029C COX16P47081 118 aa2.66□□□□□ -1.98
VPS53YJL029C MCM22P47167 239 aa2.66□□□□□ -1.98
VPS53YJL029C CPT1P17898 393 aa2.65□□□□□ -1.98
VPS53YJL029C DER1P38307 211 aa2.65□□□□□ -1.98
VPS53YJL029C MST28P39552 234 aa2.65□□□□□ -1.98
VPS53YJL029C YJR111CP47148 283 aaKnown RBP2.65□□□□□ -1.98
VPS53YJL029C YGL117WP53133 265 aa2.65□□□□□ -1.98
VPS53YJL029C MST27P53176 234 aa2.65□□□□□ -1.98
VPS53YJL029C YCL001W-AP87012 153 aa2.65□□□□□ -1.98
VPS53YJL029C YMR316C-AI2HB70 103 aa2.65□□□□□ -1.99
VPS53YJL029C YBR085C-AO43137 85 aa2.65□□□□□ -1.99
VPS53YJL029C SNU13P39990 126 aaKnown RBP2.65□□□□□ -1.99
VPS53YJL029C SGF11Q03067 99 aa2.65□□□□□ -1.99
VPS53YJL029C SNO1Q03144 224 aa2.65□□□□□ -1.99
VPS53YJL029C AVO2Q04749 426 aa2.65□□□□□ -1.99
VPS53YJL029C YOL160WQ08321 113 aa2.65□□□□□ -1.99
VPS53YJL029C FIT2Q08906 153 aa2.65□□□□□ -1.99
VPS53YJL029C YOR011W-AQ3E807 68 aa2.65□□□□□ -1.99
VPS53YJL029C YCR075W-AQ3E830 75 aa2.65□□□□□ -1.99
VPS53YJL029C HTB2P02294 131 aa2.64□□□□□ -1.99
VPS53YJL029C YCH1P42937 148 aa2.64□□□□□ -1.99
VPS53YJL029C TAD2P47058 250 aa2.64□□□□□ -1.99
VPS53YJL029C YGL185CP53100 379 aa2.64□□□□□ -1.99
VPS53YJL029C YMR007WQ03675 126 aa2.64□□□□□ -1.99
VPS53YJL029C CTR3Q06686 241 aa2.64□□□□□ -1.99
VPS53YJL029C LSM2P38203 95 aaKnown RBP2.64□□□□□ -1.99
VPS53YJL029C YHR022CP38763 256 aa2.64□□□□□ -1.99
VPS53YJL029C YHR173CP38864 112 aa2.64□□□□□ -1.99
VPS53YJL029C LCB3P47013 409 aa2.64□□□□□ -1.99
VPS53YJL029C HAM1P47119 197 aaKnown RBP2.64□□□□□ -1.99
VPS53YJL029C TIM21P53220 239 aa2.64□□□□□ -1.99
VPS53YJL029C VAR1P02381 398 aa2.63□□□□□ -1.99
VPS53YJL029C RPB3P16370 318 aaKnown RBP2.63□□□□□ -1.99
VPS53YJL029C NRG2P38082 220 aa2.63□□□□□ -1.99
VPS53YJL029C AME1P38313 324 aa2.63□□□□□ -1.99
VPS53YJL029C MBB1P39534 108 aa2.63□□□□□ -1.99
VPS53YJL029C MIG3P39943 394 aa2.63□□□□□ -1.99
VPS53YJL029C YER135CP40082 130 aa2.63□□□□□ -1.99
VPS53YJL029C FMP41P53889 259 aaKnown RBP2.63□□□□□ -1.99
VPS53YJL029C PRM7Q12459 698 aa2.63□□□□□ -1.99
VPS53YJL029C COX19Q3E731 98 aa2.63□□□□□ -1.99
VPS53YJL029C YLR342W-AQ3E810 57 aa2.63□□□□□ -1.99
VPS53YJL029C RPS22AP0C0W1 130 aaKnown RBP2.63□□□□□ -1.99
VPS53YJL029C CDC50P25656 391 aa2.63□□□□□ -1.99
VPS53YJL029C PRE5P40302 234 aaKnown RBP2.63□□□□□ -1.99
VPS53YJL029C CYB5P40312 120 aa2.63□□□□□ -1.99
VPS53YJL029C RDS3Q06835 107 aaPredicted RBP2.63□□□□□ -1.99
VPS53YJL029C SPO13P23624 291 aa2.62□□□□□ -1.99
VPS53YJL029C VMA16P23968 213 aa2.62□□□□□ -1.99
VPS53YJL029C ECM25P32525 599 aa2.62□□□□□ -1.99
VPS53YJL029C EMC5P40540 141 aa2.62□□□□□ -1.99
VPS53YJL029C TMA23Q03525 211 aa2.62□□□□□ -1.99
VPS53YJL029C SDO1Q07953 250 aaKnown RBP2.62□□□□□ -1.99
VPS53YJL029C ERV2Q12284 196 aa2.62□□□□□ -1.99
VPS53YJL029C RNA15P25299 296 aaPredicted RBP2.62□□□□□ -1.99
VPS53YJL029C LAC1P28496 418 aa2.62□□□□□ -1.99
VPS53YJL029C PAU4P53427 120 aa2.62□□□□□ -1.99
VPS53YJL029C PLP1Q04004 230 aa2.62□□□□□ -1.99
VPS53YJL029C YGR240C-AQ3E786 66 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 230.1 ms