RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W RDS3Q06835 107 aaPredicted RBP7.62□□□□□ -1.19
UBA4YHR111W YPR145C-AQ2V2P0 78 aa7.62□□□□□ -1.19
UBA4YHR111W MIG3P39943 394 aa7.61□□□□□ -1.19
UBA4YHR111W SPC25P40014 221 aa7.61□□□□□ -1.19
UBA4YHR111W PRE5P40302 234 aaKnown RBP7.61□□□□□ -1.19
UBA4YHR111W SMD3P43321 101 aaKnown RBP7.61□□□□□ -1.19
UBA4YHR111W PHO23P50947 330 aa7.61□□□□□ -1.19
UBA4YHR111W LOA1Q06508 300 aa7.61□□□□□ -1.19
UBA4YHR111W YPR063CQ12160 140 aa7.61□□□□□ -1.19
UBA4YHR111W RPB3P16370 318 aaKnown RBP7.6□□□□□ -1.19
UBA4YHR111W STP4Q07351 490 aa7.6□□□□□ -1.19
UBA4YHR111W ATX2Q12067 313 aa7.6□□□□□ -1.19
UBA4YHR111W COX19Q3E731 98 aa7.6□□□□□ -1.19
UBA4YHR111W YBR298C-AQ8TGK4 73 aa7.6□□□□□ -1.19
UBA4YHR111W SNX4P47057 423 aa7.59□□□□□ -1.19
UBA4YHR111W MCM22P47167 239 aa7.59□□□□□ -1.19
UBA4YHR111W SDO1Q07953 250 aaKnown RBP7.59□□□□□ -1.19
UBA4YHR111W ERV2Q12284 196 aa7.59□□□□□ -1.19
UBA4YHR111W SME1Q12330 94 aaPredicted RBP7.59□□□□□ -1.19
UBA4YHR111W RPP1AP05318 106 aaPredicted RBP7.58□□□□□ -1.2
UBA4YHR111W MRS1P07266 363 aa7.58□□□□□ -1.2
UBA4YHR111W RPS0AP32905 252 aaKnown RBP7.58□□□□□ -1.2
UBA4YHR111W RPL14AP36105 138 aaKnown RBP7.58□□□□□ -1.2
UBA4YHR111W RPL14BP38754 138 aaKnown RBP7.58□□□□□ -1.2
UBA4YHR111W VMA22P38784 181 aa7.58□□□□□ -1.2
UBA4YHR111W LOC1P43586 204 aaPredicted RBP7.58□□□□□ -1.2
UBA4YHR111W TMA23Q03525 211 aa7.58□□□□□ -1.2
UBA4YHR111W CCW12Q12127 133 aa7.58□□□□□ -1.2
UBA4YHR111W SHG1P38337 142 aa7.57□□□□□ -1.2
UBA4YHR111W PAU4P53427 120 aa7.57□□□□□ -1.2
UBA4YHR111W MRPL20P22354 195 aaPredicted RBP7.56□□□□□ -1.2
UBA4YHR111W NNK1P36003 928 aa7.56□□□□□ -1.2
UBA4YHR111W YHR022CP38763 256 aa7.56□□□□□ -1.2
UBA4YHR111W TOM7P53507 60 aa7.56□□□□□ -1.2
UBA4YHR111W CYC7P00045 113 aa7.55□□□□□ -1.2
UBA4YHR111W HTB2P02294 131 aa7.55□□□□□ -1.2
UBA4YHR111W YHR173CP38864 112 aa7.55□□□□□ -1.2
UBA4YHR111W HUA1P40325 198 aa7.55□□□□□ -1.2
UBA4YHR111W YBR085C-AO43137 85 aa7.54□□□□□ -1.2
UBA4YHR111W RPL2AP0CX45 254 aaKnown RBP7.54□□□□□ -1.2
UBA4YHR111W RPL2BP0CX46 254 aaKnown RBP7.54□□□□□ -1.2
UBA4YHR111W RPS11AP0CX47 156 aaKnown RBP7.54□□□□□ -1.2
UBA4YHR111W RPS11BP0CX48 156 aaKnown RBP7.54□□□□□ -1.2
UBA4YHR111W RNA15P25299 296 aaPredicted RBP7.54□□□□□ -1.2
UBA4YHR111W HMX1P32339 317 aa7.54□□□□□ -1.2
UBA4YHR111W FMP41P53889 259 aaKnown RBP7.54□□□□□ -1.2
UBA4YHR111W RAV2Q03956 351 aa7.54□□□□□ -1.2
UBA4YHR111W PAU1P0CE88 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU14P0CE89 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU6P0CE90 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU18P0CE91 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU8P0CE92 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU11P0CE93 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU13P38725 120 aa7.53□□□□□ -1.2
UBA4YHR111W YFR035CP43608 114 aa7.53□□□□□ -1.2
UBA4YHR111W PAU10Q03050 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU20Q08322 120 aa7.53□□□□□ -1.2
UBA4YHR111W PAU9Q3E770 120 aa7.53□□□□□ -1.2
UBA4YHR111W MSK1P32048 576 aa7.52□□□□□ -1.2
UBA4YHR111W AFR1P33304 620 aa7.52□□□□□ -1.2
UBA4YHR111W YJR096WP47137 282 aa7.52□□□□□ -1.2
UBA4YHR111W COA4Q05809 96 aa7.52□□□□□ -1.2
UBA4YHR111W FMP16Q12497 93 aa7.52□□□□□ -1.2
UBA4YHR111W RIB5P38145 238 aa7.52□□□□□ -1.21
UBA4YHR111W SPI1P40092 148 aa7.52□□□□□ -1.21
UBA4YHR111W YOL085CQ99345 113 aa7.52□□□□□ -1.21
UBA4YHR111W RPL31BP0C2H9 113 aaKnown RBP7.51□□□□□ -1.21
UBA4YHR111W YCR001WP25347 104 aa7.51□□□□□ -1.21
UBA4YHR111W YMR141CP40211 102 aa7.51□□□□□ -1.21
UBA4YHR111W YDR215CQ12240 137 aa7.51□□□□□ -1.21
UBA4YHR111W TMA17Q12513 150 aa7.51□□□□□ -1.21
UBA4YHR111W CPT1P17898 393 aa7.5□□□□□ -1.21
UBA4YHR111W YIL163CP40448 117 aa7.5□□□□□ -1.21
UBA4YHR111W SNN1P48232 102 aa7.5□□□□□ -1.21
UBA4YHR111W HAL1Q01766 294 aa7.5□□□□□ -1.21
UBA4YHR111W VAM10Q08474 114 aa7.5□□□□□ -1.21
UBA4YHR111W YLR302CO13544 120 aa7.49□□□□□ -1.21
UBA4YHR111W UBC12P52491 188 aa7.49□□□□□ -1.21
UBA4YHR111W SGF11Q03067 99 aa7.49□□□□□ -1.21
UBA4YHR111W RPS22AP0C0W1 130 aaKnown RBP7.48□□□□□ -1.21
UBA4YHR111W AME1P38313 324 aa7.48□□□□□ -1.21
UBA4YHR111W CYB5P40312 120 aa7.48□□□□□ -1.21
UBA4YHR111W DAD4P69851 72 aa7.48□□□□□ -1.21
UBA4YHR111W VMA7P39111 118 aa7.47□□□□□ -1.21
UBA4YHR111W VHS2P40463 436 aa7.47□□□□□ -1.21
UBA4YHR111W VAR1P02381 398 aa7.46□□□□□ -1.22
UBA4YHR111W YPT10P38146 199 aa7.46□□□□□ -1.22
UBA4YHR111W MET32Q12041 191 aa7.46□□□□□ -1.22
UBA4YHR111W DAD1Q12248 94 aa7.46□□□□□ -1.22
UBA4YHR111W ATP14Q12349 124 aa7.46□□□□□ -1.22
UBA4YHR111W YLR342W-AQ3E810 57 aa7.45□□□□□ -1.22
UBA4YHR111W VMA16P23968 213 aa7.44□□□□□ -1.22
UBA4YHR111W VMA9Q3E7B6 73 aa7.44□□□□□ -1.22
UBA4YHR111W YCR075W-AQ3E830 75 aa7.44□□□□□ -1.22
UBA4YHR111W YGL185CP53100 379 aa7.43□□□□□ -1.22
UBA4YHR111W UTP23Q12339 254 aaKnown RBP7.43□□□□□ -1.22
UBA4YHR111W Q0255P03881 472 aa7.42□□□□□ -1.22
UBA4YHR111W COQ3P27680 312 aa7.42□□□□□ -1.22
UBA4YHR111W YBR090CP38253 122 aa7.42□□□□□ -1.22
UBA4YHR111W KEG1P43614 200 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms