RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W TIR2P33890 251 aa3.59□□□□□ -1.83
VPS29YHR012W YEA6P39953 335 aa3.59□□□□□ -1.83
VPS29YHR012W YER135CP40082 130 aa3.59□□□□□ -1.83
VPS29YHR012W EMC5P40540 141 aa3.59□□□□□ -1.83
VPS29YHR012W IMP2P46972 177 aa3.59□□□□□ -1.83
VPS29YHR012W GNP1P48813 663 aa3.59□□□□□ -1.83
VPS29YHR012W YNR071CP53757 342 aa3.59□□□□□ -1.83
VPS29YHR012W FMP41P53889 259 aaKnown RBP3.59□□□□□ -1.83
VPS29YHR012W IZH1Q03419 316 aa3.59□□□□□ -1.83
VPS29YHR012W MRPS8Q03799 155 aa3.59□□□□□ -1.83
VPS29YHR012W YBR126W-AQ8TGU7 68 aa3.59□□□□□ -1.83
VPS29YHR012W YDR157WA0A023PZE8 133 aa3.58□□□□□ -1.84
VPS29YHR012W AFR1P33304 620 aa3.58□□□□□ -1.84
VPS29YHR012W RPR2P40571 144 aa3.58□□□□□ -1.84
VPS29YHR012W GIS2P53849 153 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84 RIP-Chip
VPS29YHR012W YCL001W-AP87012 153 aa3.58□□□□□ -1.84
VPS29YHR012W SHH3Q04487 196 aa3.58□□□□□ -1.84
VPS29YHR012W AYT1Q12226 474 aa3.58□□□□□ -1.84
VPS29YHR012W POM34Q12445 299 aa3.58□□□□□ -1.84
VPS29YHR012W VMA9Q3E7B6 73 aa3.58□□□□□ -1.84
VPS29YHR012W COA2Q3E823 68 aa3.58□□□□□ -1.84
VPS29YHR012W YMR316C-AI2HB70 103 aa3.57□□□□□ -1.84
VPS29YHR012W MSK1P32048 576 aa3.57□□□□□ -1.84
VPS29YHR012W SHG1P38337 142 aa3.57□□□□□ -1.84
VPS29YHR012W MIG3P39943 394 aa3.57□□□□□ -1.84
VPS29YHR012W YEA4P40004 342 aa3.57□□□□□ -1.84
VPS29YHR012W GLE2P40066 365 aa3.57□□□□□ -1.84
VPS29YHR012W YIL077CP40508 320 aa3.57□□□□□ -1.84
VPS29YHR012W YIL024CP40543 189 aa3.57□□□□□ -1.84
VPS29YHR012W MRPS17Q03246 237 aaPredicted RBP3.57□□□□□ -1.84
VPS29YHR012W SDO1Q07953 250 aaKnown RBP3.57□□□□□ -1.84
VPS29YHR012W YOL160WQ08321 113 aa3.57□□□□□ -1.84
VPS29YHR012W PCC1Q3E833 88 aa3.57□□□□□ -1.84
VPS29YHR012W SHB17P36136 271 aaKnown RBP3.56□□□□□ -1.84
VPS29YHR012W SPC25P40014 221 aa3.56□□□□□ -1.84
VPS29YHR012W ATG27P46989 271 aa3.56□□□□□ -1.84
VPS29YHR012W LCB3P47013 409 aa3.56□□□□□ -1.84
VPS29YHR012W AIM24P47127 394 aa3.56□□□□□ -1.84
VPS29YHR012W YJR096WP47137 282 aa3.56□□□□□ -1.84
VPS29YHR012W YNR066CP53752 436 aa3.56□□□□□ -1.84
VPS29YHR012W YMR082CQ04276 118 aa3.56□□□□□ -1.84
VPS29YHR012W CCW12Q12127 133 aa3.56□□□□□ -1.84
VPS29YHR012W ERV2Q12284 196 aa3.56□□□□□ -1.84
VPS29YHR012W Q0142Q9ZZW4 58 aa3.56□□□□□ -1.84
VPS29YHR012W MRP2P10663 115 aaPredicted RBP3.55□□□□□ -1.84
VPS29YHR012W QCR9P22289 66 aa3.55□□□□□ -1.84
VPS29YHR012W HSP12P22943 109 aaKnown RBP3.55□□□□□ -1.84
VPS29YHR012W YCR001WP25347 104 aa3.55□□□□□ -1.84
VPS29YHR012W YCR025CP25352 136 aa3.55□□□□□ -1.84
VPS29YHR012W PRE5P40302 234 aaKnown RBP3.55□□□□□ -1.84
VPS29YHR012W YGR269WP40326 108 aa3.55□□□□□ -1.84
VPS29YHR012W GAT4P40569 121 aa3.55□□□□□ -1.84
VPS29YHR012W CAF40P53829 373 aa3.55□□□□□ -1.84
VPS29YHR012W ADD37Q03233 198 aa3.55□□□□□ -1.84
VPS29YHR012W TMA23Q03525 211 aa3.55□□□□□ -1.84
VPS29YHR012W ATC1Q04005 294 aa3.55□□□□□ -1.84
VPS29YHR012W ARR3Q06598 404 aa3.55□□□□□ -1.84
VPS29YHR012W USV1Q12132 391 aa3.55□□□□□ -1.84
VPS29YHR012W ATP16Q12165 160 aa3.55□□□□□ -1.84
VPS29YHR012W PRR2Q12310 699 aa3.55□□□□□ -1.84
VPS29YHR012W COX19Q3E731 98 aa3.55□□□□□ -1.84
VPS29YHR012W MRPL20P22354 195 aaPredicted RBP3.54□□□□□ -1.84
VPS29YHR012W VMA16P23968 213 aa3.54□□□□□ -1.84
VPS29YHR012W RIB5P38145 238 aa3.54□□□□□ -1.84
VPS29YHR012W YBR292CP38357 123 aa3.54□□□□□ -1.84
VPS29YHR012W POG1P40473 351 aa3.54□□□□□ -1.84
VPS29YHR012W HHO1P53551 258 aa3.54□□□□□ -1.84
VPS29YHR012W MRX11Q03079 207 aa3.54□□□□□ -1.84
VPS29YHR012W SNO1Q03144 224 aa3.54□□□□□ -1.84
VPS29YHR012W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
VPS29YHR012W LSM2P38203 95 aaKnown RBP3.53□□□□□ -1.84
VPS29YHR012W DER1P38307 211 aa3.53□□□□□ -1.84
VPS29YHR012W MBB1P39534 108 aa3.53□□□□□ -1.84
VPS29YHR012W PGD1P40356 397 aa3.53□□□□□ -1.84
VPS29YHR012W YDL242WQ07746 117 aa3.53□□□□□ -1.84
VPS29YHR012W ZEO1Q08245 113 aa3.53□□□□□ -1.84
VPS29YHR012W YOR015WQ12169 119 aa3.53□□□□□ -1.84
VPS29YHR012W RPB3P16370 318 aaKnown RBP3.52□□□□□ -1.85
VPS29YHR012W CPT1P17898 393 aa3.52□□□□□ -1.85
VPS29YHR012W YBL059WP34224 193 aa3.52□□□□□ -1.85
VPS29YHR012W YHR022CP38763 256 aa3.52□□□□□ -1.85
VPS29YHR012W VHS2P40463 436 aa3.52□□□□□ -1.85
VPS29YHR012W SPC1P46965 94 aa3.52□□□□□ -1.85
VPS29YHR012W RIB4P50861 169 aaPredicted RBP3.52□□□□□ -1.85
VPS29YHR012W YGR025WP53216 100 aa3.52□□□□□ -1.85
VPS29YHR012W YMR253CQ04835 414 aa3.52□□□□□ -1.85
VPS29YHR012W CTR3Q06686 241 aa3.52□□□□□ -1.85
VPS29YHR012W ATX2Q12067 313 aa3.52□□□□□ -1.85
VPS29YHR012W RPL11AP0C0W9 174 aaKnown RBP3.51□□□□□ -1.85
VPS29YHR012W SPO13P23624 291 aa3.51□□□□□ -1.85
VPS29YHR012W AHT1P29589 182 aa3.51□□□□□ -1.85
VPS29YHR012W DUT1P33317 147 aa3.51□□□□□ -1.85
VPS29YHR012W ATG8P38182 117 aaRIP-Chip data3.51□□□□□ -1.85not detected
VPS29YHR012W IRC22P40006 225 aa3.51□□□□□ -1.85
VPS29YHR012W YNL200CP40165 246 aaKnown RBP3.51□□□□□ -1.85
VPS29YHR012W YCH1P42937 148 aa3.51□□□□□ -1.85
VPS29YHR012W SMD3P43321 101 aaKnown RBP3.51□□□□□ -1.85
VPS29YHR012W KEG1P43614 200 aa3.51□□□□□ -1.85
VPS29YHR012W MOG1P47123 218 aa3.51□□□□□ -1.85
VPS29YHR012W TIM21P53220 239 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms