RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W PHO13P19881 312 aa2.19□□□□□ -2.06
PTI1YGR156W DER1P38307 211 aa2.19□□□□□ -2.06
PTI1YGR156W YBR209WP38311 105 aa2.19□□□□□ -2.06
PTI1YGR156W VMA22P38784 181 aa2.19□□□□□ -2.06
PTI1YGR156W MTW1P39731 289 aa2.19□□□□□ -2.06
PTI1YGR156W PHB1P40961 287 aa2.19□□□□□ -2.06
PTI1YGR156W ERG25P53045 309 aa2.19□□□□□ -2.06
PTI1YGR156W POP3P53833 195 aaPredicted RBP2.19□□□□□ -2.06
PTI1YGR156W RGM1Q00453 211 aa2.19□□□□□ -2.06
PTI1YGR156W YMR099CQ03161 297 aaKnown RBP2.19□□□□□ -2.06
PTI1YGR156W NHP10Q03435 203 aa2.19□□□□□ -2.06
PTI1YGR156W PLP1Q04004 230 aa2.19□□□□□ -2.06
PTI1YGR156W YLR236CA0A023PZG4 107 aa2.18□□□□□ -2.06
PTI1YGR156W TIR1P10863 254 aa2.18□□□□□ -2.06
PTI1YGR156W FZF1P32805 299 aa2.18□□□□□ -2.06
PTI1YGR156W FIG1P38224 298 aa2.18□□□□□ -2.06
PTI1YGR156W AGE2P40529 298 aa2.18□□□□□ -2.06
PTI1YGR156W APQ12P40532 138 aa2.18□□□□□ -2.06
PTI1YGR156W APS3P47064 194 aa2.18□□□□□ -2.06
PTI1YGR156W XPT1P47165 209 aa2.18□□□□□ -2.06
PTI1YGR156W TIM13P53299 105 aa2.18□□□□□ -2.06
PTI1YGR156W MPA43P53583 542 aaPredicted RBP2.18□□□□□ -2.06
PTI1YGR156W VPS71Q03433 280 aa2.18□□□□□ -2.06
PTI1YGR156W UBR1P19812 1950 aa2.18□□□□□ -2.06
PTI1YGR156W FLO9P39712 1322 aa2.17□□□□□ -2.06
PTI1YGR156W GPA2P10823 449 aa2.17□□□□□ -2.06
PTI1YGR156W YCR023CP25351 611 aa2.17□□□□□ -2.06
PTI1YGR156W SUI1P32911 108 aaKnown RBP2.17□□□□□ -2.06
PTI1YGR156W NRG2P38082 220 aa2.17□□□□□ -2.06
PTI1YGR156W PRS3P38689 320 aaKnown RBP2.17□□□□□ -2.06
PTI1YGR156W FYV4P38783 130 aaPredicted RBP2.17□□□□□ -2.06
PTI1YGR156W AYR1P40471 297 aa2.17□□□□□ -2.06
PTI1YGR156W SEC16P48415 2195 aaKnown RBP2.16□□□□□ -2.06
PTI1YGR156W YCR099CP25657 155 aa2.16□□□□□ -2.06
PTI1YGR156W CSH1P38287 376 aa2.16□□□□□ -2.06
PTI1YGR156W DSE2P38844 325 aa2.16□□□□□ -2.06
PTI1YGR156W SOK1P40317 901 aa2.16□□□□□ -2.06
PTI1YGR156W LSM3P57743 89 aaKnown RBP2.16□□□□□ -2.06
PTI1YGR156W YMR295CQ03559 197 aa2.16□□□□□ -2.06
PTI1YGR156W SHH3Q04487 196 aa2.16□□□□□ -2.06
PTI1YGR156W STT4P37297 1900 aa2.15□□□□□ -2.06
PTI1YGR156W YFR010W-AP0C5N0 62 aa2.15□□□□□ -2.07
PTI1YGR156W IDP1P21954 428 aaKnown RBP2.15□□□□□ -2.07
PTI1YGR156W SPC25P40014 221 aa2.15□□□□□ -2.07
PTI1YGR156W ERJ5P43613 295 aaPredicted RBP2.15□□□□□ -2.07
PTI1YGR156W YGL235WP53071 178 aa2.15□□□□□ -2.07
PTI1YGR156W THI74Q04083 370 aa2.15□□□□□ -2.07
PTI1YGR156W SML1Q04964 104 aa2.15□□□□□ -2.07
PTI1YGR156W YPR127WQ06494 345 aa2.15□□□□□ -2.07
PTI1YGR156W YPR174CQ06616 221 aaPredicted RBP2.15□□□□□ -2.07
PTI1YGR156W ATP20Q12233 115 aa2.15□□□□□ -2.07
PTI1YGR156W SEC11P15367 167 aa2.14□□□□□ -2.07
PTI1YGR156W MDH2P22133 377 aa2.14□□□□□ -2.07
PTI1YGR156W STP22P25604 385 aa2.14□□□□□ -2.07
PTI1YGR156W TFC1P32367 649 aa2.14□□□□□ -2.07
PTI1YGR156W NUF2P33895 451 aa2.14□□□□□ -2.07
PTI1YGR156W CPR5P35176 225 aa2.14□□□□□ -2.07
PTI1YGR156W YHL037CP38733 133 aa2.14□□□□□ -2.07
PTI1YGR156W NSA2P40078 261 aaKnown RBP2.14□□□□□ -2.07
PTI1YGR156W ALB1P47019 175 aaPredicted RBP2.14□□□□□ -2.07
PTI1YGR156W KNH1P50112 268 aa2.14□□□□□ -2.07
PTI1YGR156W YGL101WP53144 215 aa2.14□□□□□ -2.07
PTI1YGR156W TMA20P89886 181 aaPredicted RBP2.14□□□□□ -2.07
PTI1YGR156W GAL83Q04739 417 aa2.14□□□□□ -2.07
PTI1YGR156W ANT1Q06497 328 aa2.14□□□□□ -2.07
PTI1YGR156W FYV12Q08559 129 aa2.14□□□□□ -2.07
PTI1YGR156W BOL1Q3E793 110 aa2.14□□□□□ -2.07
PTI1YGR156W Q0297Q9ZZV8 51 aa2.14□□□□□ -2.07
PTI1YGR156W YSF3P0C074 85 aaPredicted RBP2.13□□□□□ -2.07
PTI1YGR156W UBI4P0CG63 381 aaKnown RBP2.13□□□□□ -2.07
PTI1YGR156W YHR214C-DP0CX93 97 aa2.13□□□□□ -2.07
PTI1YGR156W NSP1P14907 823 aaKnown RBP2.13□□□□□ -2.07
PTI1YGR156W UBC8P28263 218 aa2.13□□□□□ -2.07
PTI1YGR156W RPS1AP33442 255 aaKnown RBP2.13□□□□□ -2.07
PTI1YGR156W SLM6P38343 150 aa2.13□□□□□ -2.07
PTI1YGR156W CUE4Q04201 117 aaPredicted RBP2.13□□□□□ -2.07
PTI1YGR156W RNH202Q05635 350 aa2.13□□□□□ -2.07
PTI1YGR156W IRC23Q08416 157 aa2.13□□□□□ -2.07
PTI1YGR156W Q0144Q9ZZW2 109 aa2.13□□□□□ -2.07
PTI1YGR156W RPS28BP0C0X0 67 aaKnown RBP2.12□□□□□ -2.07
PTI1YGR156W MOG1P47123 218 aa2.12□□□□□ -2.07
PTI1YGR156W RCF2P53721 224 aa2.12□□□□□ -2.07
PTI1YGR156W YNL033WP53964 284 aa2.12□□□□□ -2.07
PTI1YGR156W BUD25P85052 153 aa2.12□□□□□ -2.07
PTI1YGR156W YDC1Q02896 317 aa2.12□□□□□ -2.07
PTI1YGR156W YMR253CQ04835 414 aa2.12□□□□□ -2.07
PTI1YGR156W RPS28AQ3E7X9 67 aaPredicted RBP2.12□□□□□ -2.07
PTI1YGR156W PET20Q99373 253 aa2.12□□□□□ -2.07
PTI1YGR156W FAS1P07149 2051 aaKnown RBP2.11□□□□□ -2.07
PTI1YGR156W CCW14O13547 238 aa2.11□□□□□ -2.07
PTI1YGR156W NMT1P14743 455 aa2.11□□□□□ -2.07
PTI1YGR156W PAM17P36147 197 aa2.11□□□□□ -2.07
PTI1YGR156W RRT1P38192 103 aa2.11□□□□□ -2.07
PTI1YGR156W PEP8P40335 379 aa2.11□□□□□ -2.07
PTI1YGR156W RPS12P48589 143 aaKnown RBP2.11□□□□□ -2.07
PTI1YGR156W SBH2P52871 88 aa2.11□□□□□ -2.07
PTI1YGR156W ORM1P53224 222 aa2.11□□□□□ -2.07
PTI1YGR156W DAD4P69851 72 aa2.11□□□□□ -2.07
PTI1YGR156W DIG2Q03373 323 aaKnown RBP2.11□□□□□ -2.07
PTI1YGR156W MAK3Q03503 176 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms