RNA–Protein interactions for RNA: YFL021W

GAT1, Transcript of Transcriptional activator of nitrogen catabolite repression genes, yeast

Gene GAT1, Length 1,533 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAT1	YFL021W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.9	□□□□□ -1.63
GAT1	YFL021W	IRA1	P18963	3092 aa		4.9	□□□□□ -1.63
GAT1	YFL021W	ATP5	P09457	212 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	RPI1	P23250	407 aa	Known RBP	4.89	□□□□□ -1.63
GAT1	YFL021W	RPB11	P38902	120 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	UBC13	P52490	153 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	RPN14	P53196	417 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	CPD1	P53314	239 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	DYN2	Q02647	92 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	YPL077C	Q02831	240 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	LPP1	Q04396	274 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	SHH3	Q04487	196 aa		4.89	□□□□□ -1.63
GAT1	YFL021W	RPL9A	P05738	191 aa	Known RBP	4.88	□□□□□ -1.63
GAT1	YFL021W	TOM40	P23644	387 aa	Known RBP	4.88	□□□□□ -1.63
GAT1	YFL021W	FPR2	P32472	135 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	TCA17	P32613	152 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	YKL102C	P34249	101 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	DAD2	P36162	133 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	DSK2	P48510	373 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	SCW10	Q04951	389 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	RFM1	Q12192	310 aa		4.88	□□□□□ -1.63
GAT1	YFL021W	SUA7	P29055	345 aa	Predicted RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	YAR068W	P39564	161 aa		4.87	□□□□□ -1.63
GAT1	YFL021W	YIL163C	P40448	117 aa		4.87	□□□□□ -1.63
GAT1	YFL021W	CDC40	P40968	455 aa	Predicted RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	RPL9B	P51401	191 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	POM33	Q12164	279 aa		4.87	□□□□□ -1.63
GAT1	YFL021W	TOR2	P32600	2474 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	RPL35A	P0CX84	120 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	RPL35B	P0CX85	120 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	MST28	P39552	234 aa		4.87	□□□□□ -1.63
GAT1	YFL021W	YJL118W	P47022	219 aa		4.87	□□□□□ -1.63
GAT1	YFL021W	RPL21A	Q02753	160 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	GEP5	Q12393	293 aa		4.87	□□□□□ -1.63
GAT1	YFL021W	RPL21B	Q12672	160 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.87	□□□□□ -1.63
GAT1	YFL021W	HEM4	P06174	275 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	HMRA1	P0CY11	126 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	QRI5	P32344	111 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	RAD23	P32628	398 aa	Known RBP	4.86	□□□□□ -1.63
GAT1	YFL021W	MIX23	P38162	196 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	GAT2	P40209	560 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	SAE3	P89114	91 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	YDR114C	Q04597	100 aa		4.86	□□□□□ -1.63
GAT1	YFL021W	YMR316C-A	I2HB70	103 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	SOD1	P00445	154 aa	Known RBP	4.85	□□□□□ -1.63
GAT1	YFL021W	LDB16	P25587	256 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	SOR1	P35497	357 aa	Known RBP	4.85	□□□□□ -1.63
GAT1	YFL021W	RPA43	P46669	326 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	SSU72	P53538	206 aa	Predicted RBP	4.85	□□□□□ -1.63
GAT1	YFL021W	ATP19	P81451	68 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	STD1	Q02794	444 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	YHP1	Q04116	353 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	SOR2	Q07786	357 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	RNH203	Q12338	110 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	YCR024C-B	Q3E7Z8	88 aa		4.85	□□□□□ -1.63
GAT1	YFL021W	GCN1	P33892	2672 aa	Known RBP	4.85	□□□□□ -1.63
GAT1	YFL021W	PIS1	P06197	220 aa	Known RBP	4.84	□□□□□ -1.63
GAT1	YFL021W	TIR1	P10863	254 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	YKL187C	P34231	750 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	PAU16	P35994	123 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	PAM17	P36147	197 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	YHR173C	P38864	112 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	YPI1	P43587	155 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	YMR166C	Q03829	368 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	API2	Q04413	109 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	GAT3	Q07928	141 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	FOL3	Q12676	427 aa	Predicted RBP	4.84	□□□□□ -1.63
GAT1	YFL021W	YOS1	Q3E834	85 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	YPR014C	Q6B0W2	109 aa		4.84	□□□□□ -1.63
GAT1	YFL021W	RPL31A	P0C2H8	113 aa	Known RBP	4.83	□□□□□ -1.64
GAT1	YFL021W	RPS23A	P0CX29	145 aa	Known RBP	4.83	□□□□□ -1.64
GAT1	YFL021W	RPS23B	P0CX30	145 aa		4.83	□□□□□ -1.64
GAT1	YFL021W	NOP1	P15646	327 aa	Known RBP	4.83	□□□□□ -1.64
GAT1	YFL021W	YBR090C	P38253	122 aa		4.83	□□□□□ -1.64
GAT1	YFL021W	CSH1	P38287	376 aa		4.83	□□□□□ -1.64
GAT1	YFL021W	YER134C	P40081	178 aa		4.83	□□□□□ -1.64
GAT1	YFL021W	GLC8	P41818	229 aa		4.83	□□□□□ -1.64
GAT1	YFL021W	CUP2	P15315	225 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	HSP12	P22943	109 aa	Known RBP	4.82	□□□□□ -1.64
GAT1	YFL021W	PIR5	P46999	287 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
GAT1	YFL021W	NAT5	Q08689	176 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	TIM18	Q08749	192 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	TPT1	Q12272	230 aa	Known RBP	4.82	□□□□□ -1.64
GAT1	YFL021W	YCL001W-B	Q96VH2	84 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	AME1	P38313	324 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	DOG1	P38774	246 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	BDH1	P39714	382 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	YJL028W	P47062	111 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	CNL1	Q06333	122 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	YOL024W	Q08172	172 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	FIT2	Q08906	153 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	YMR105W-A	Q8TGS8	64 aa		4.82	□□□□□ -1.64
GAT1	YFL021W	GSP1	P32835	219 aa	Known RBP	4.81	□□□□□ -1.64
GAT1	YFL021W	GSP2	P32836	220 aa	Known RBP	4.81	□□□□□ -1.64
GAT1	YFL021W	TEM1	P38987	245 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	PRE5	P40302	234 aa	Known RBP	4.81	□□□□□ -1.64
GAT1	YFL021W	YFL067W	P43537	175 aa		4.81	□□□□□ -1.64
GAT1	YFL021W	YGR018C	P53211	109 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 67 ms