RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W PET54P10834 293 aa4□□□□□ -1.77
LCP5YER127W NHP6BP11633 99 aaKnown RBP4□□□□□ -1.77
LCP5YER127W YMR31P19955 123 aa4□□□□□ -1.77
LCP5YER127W SHE2P36068 246 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
LCP5YER127W MRPL49P40858 161 aaPredicted RBP4□□□□□ -1.77
LCP5YER127W MCM22P47167 239 aa4□□□□□ -1.77
LCP5YER127W YPD1Q07688 167 aa4□□□□□ -1.77
LCP5YER127W PRM3Q08931 133 aa4□□□□□ -1.77
LCP5YER127W DYN1P36022 4092 aa4□□□□□ -1.77
LCP5YER127W Q0255P03881 472 aa3.99□□□□□ -1.77
LCP5YER127W ADH3P07246 375 aaKnown RBP3.99□□□□□ -1.77
LCP5YER127W GRX2P17695 143 aaKnown RBP3.99□□□□□ -1.77
LCP5YER127W SCM4P32564 187 aa3.99□□□□□ -1.77
LCP5YER127W FIT1Q04433 528 aa3.99□□□□□ -1.77
LCP5YER127W YMR252CQ04814 134 aa3.99□□□□□ -1.77
LCP5YER127W YLR099W-AQ3E798 87 aa3.99□□□□□ -1.77
LCP5YER127W RFC2P40348 353 aa3.98□□□□□ -1.77
LCP5YER127W RPA43P46669 326 aa3.98□□□□□ -1.77
LCP5YER127W SNX4P47057 423 aa3.98□□□□□ -1.77
LCP5YER127W YAE1P47118 141 aaPredicted RBP3.98□□□□□ -1.77
LCP5YER127W RBL2P48606 106 aaKnown RBP3.98□□□□□ -1.77
LCP5YER127W GRX5Q02784 150 aa3.98□□□□□ -1.77
LCP5YER127W GRX3Q03835 250 aa3.98□□□□□ -1.77
LCP5YER127W HOR7Q05827 59 aa3.98□□□□□ -1.77
LCP5YER127W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
LCP5YER127W UTP30P36144 274 aaKnown RBP3.97□□□□□ -1.77
LCP5YER127W GPI14P47088 403 aaKnown RBP3.97□□□□□ -1.77
LCP5YER127W VPS55P47111 140 aa3.97□□□□□ -1.77
LCP5YER127W HAM1P47119 197 aaKnown RBP3.97□□□□□ -1.77
LCP5YER127W SOL1P50278 321 aa3.97□□□□□ -1.77
LCP5YER127W RPL9BP51401 191 aaKnown RBP3.97□□□□□ -1.77
LCP5YER127W ERG25P53045 309 aa3.97□□□□□ -1.77
LCP5YER127W GIM3P53900 129 aa3.97□□□□□ -1.77
LCP5YER127W VPS71Q03433 280 aa3.97□□□□□ -1.77
LCP5YER127W LPP1Q04396 274 aa3.97□□□□□ -1.77
LCP5YER127W ATG39Q06159 398 aa3.97□□□□□ -1.77
LCP5YER127W YNG1Q08465 219 aa3.97□□□□□ -1.77
LCP5YER127W PDS1P40316 373 aaPredicted RBP3.96□□□□□ -1.78
LCP5YER127W BXI1P48558 297 aa3.96□□□□□ -1.78
LCP5YER127W YGR026WP53217 278 aa3.96□□□□□ -1.78
LCP5YER127W NMA1Q06178 401 aaKnown RBP3.96□□□□□ -1.78
LCP5YER127W HEM25Q07534 307 aa3.96□□□□□ -1.78
LCP5YER127W FCY1Q12178 158 aa3.96□□□□□ -1.78
LCP5YER127W ATO3Q12359 275 aa3.96□□□□□ -1.78
LCP5YER127W YOR020W-AQ3E824 90 aa3.96□□□□□ -1.78
LCP5YER127W YOS1Q3E834 85 aa3.96□□□□□ -1.78
LCP5YER127W YHR212W-AP0CX91 67 aa3.95□□□□□ -1.78
LCP5YER127W URA6P15700 204 aa3.95□□□□□ -1.78
LCP5YER127W FCY2P17064 533 aa3.95□□□□□ -1.78
LCP5YER127W HYM1P32464 399 aa3.95□□□□□ -1.78
LCP5YER127W FMP23P38231 175 aa3.95□□□□□ -1.78
LCP5YER127W FCY21P40039 528 aa3.95□□□□□ -1.78
LCP5YER127W DOC1P53068 250 aa3.95□□□□□ -1.78
LCP5YER127W TOS8P53147 276 aa3.95□□□□□ -1.78
LCP5YER127W ALG13P53178 202 aa3.95□□□□□ -1.78
LCP5YER127W FYV6P53913 173 aa3.95□□□□□ -1.78
LCP5YER127W ARG80P07249 177 aa3.94□□□□□ -1.78
LCP5YER127W OCH1P31755 480 aa3.94□□□□□ -1.78
LCP5YER127W SPS18P32572 300 aa3.94□□□□□ -1.78
LCP5YER127W YHR138CP38841 114 aaPredicted RBP3.94□□□□□ -1.78
LCP5YER127W IKI1P38874 309 aa3.94□□□□□ -1.78
LCP5YER127W YAR068WP39564 161 aa3.94□□□□□ -1.78
LCP5YER127W MIC26P50087 233 aa3.94□□□□□ -1.78
LCP5YER127W YHR139C-AO13536 103 aa3.93□□□□□ -1.78
LCP5YER127W YBR121C-AP0C5L4 52 aa3.93□□□□□ -1.78
LCP5YER127W BUD23P25627 275 aaPredicted RBP3.93□□□□□ -1.78
LCP5YER127W RPF1P38805 295 aaKnown RBP3.93□□□□□ -1.78
LCP5YER127W PEX17P40155 199 aa3.93□□□□□ -1.78
LCP5YER127W SMD3P43321 101 aaKnown RBP3.93□□□□□ -1.78
LCP5YER127W FIP1P45976 327 aa3.93□□□□□ -1.78
LCP5YER127W ERV29P53337 310 aa3.93□□□□□ -1.78
LCP5YER127W MAK3Q03503 176 aa3.93□□□□□ -1.78
LCP5YER127W YLR365WQ7LIF2 110 aa3.93□□□□□ -1.78
LCP5YER127W ODC2Q99297 307 aa3.93□□□□□ -1.78
LCP5YER127W RPL28P02406 149 aaKnown RBP3.92□□□□□ -1.78
LCP5YER127W RPL9AP05738 191 aaKnown RBP3.92□□□□□ -1.78
LCP5YER127W RPB7P34087 171 aa3.92□□□□□ -1.78
LCP5YER127W RTC3P38804 111 aaPredicted RBP3.92□□□□□ -1.78
LCP5YER127W DIE2P50076 525 aa3.92□□□□□ -1.78
LCP5YER127W HRD1Q08109 551 aa3.92□□□□□ -1.78
LCP5YER127W EMC6Q12431 108 aa3.92□□□□□ -1.78
LCP5YER127W YOR192C-CQ3E736 78 aa3.92□□□□□ -1.78
LCP5YER127W ERG28P40030 148 aa3.91□□□□□ -1.78
LCP5YER127W PAM16P42949 149 aa3.91□□□□□ -1.78
LCP5YER127W TMA20P89886 181 aaPredicted RBP3.91□□□□□ -1.78
LCP5YER127W YNL194CP40169 301 aa3.9□□□□□ -1.79
LCP5YER127W GVP36P40531 326 aaKnown RBP3.9□□□□□ -1.79
LCP5YER127W YHP1Q04116 353 aa3.9□□□□□ -1.79
LCP5YER127W YKL183C-AQ3E765 70 aa3.9□□□□□ -1.79
LCP5YER127W YPR108W-AQ3E7B3 70 aa3.9□□□□□ -1.79
LCP5YER127W HTB1P02293 131 aaKnown RBP3.89□□□□□ -1.79
LCP5YER127W PUT1P09368 476 aa3.89□□□□□ -1.79
LCP5YER127W ROX3P25046 220 aa3.89□□□□□ -1.79
LCP5YER127W MPC2P38857 129 aa3.89□□□□□ -1.79
LCP5YER127W YGR042WP53227 271 aa3.89□□□□□ -1.79
LCP5YER127W BUD25P85052 153 aa3.89□□□□□ -1.79
LCP5YER127W ABF2Q02486 183 aa3.89□□□□□ -1.79
LCP5YER127W SUS1Q6WNK7 96 aa3.89□□□□□ -1.79
LCP5YER127W YJL218WP40892 196 aaKnown RBP3.88□□□□□ -1.79
LCP5YER127W YML108WQ03759 105 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms