RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C YPR203WQ08994 102 aa0.92□□□□□ -2.26
VAM6YDL077C YDL211CQ12121 372 aa0.92□□□□□ -2.26
VAM6YDL077C NPC2Q12408 173 aa0.92□□□□□ -2.26
VAM6YDL077C YLR365WQ7LIF2 110 aa0.92□□□□□ -2.26
VAM6YDL077C CCW14O13547 238 aa0.92□□□□□ -2.26
VAM6YDL077C INO4P13902 151 aa0.92□□□□□ -2.26
VAM6YDL077C CDC26P14724 124 aa0.92□□□□□ -2.26
VAM6YDL077C FMP46P36141 133 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C LSM2P38203 95 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C TRM7P38238 310 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C YHL018WP38744 120 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C SNF11P38956 169 aa0.92□□□□□ -2.26
VAM6YDL077C GGC1P38988 300 aa0.92□□□□□ -2.26
VAM6YDL077C YJL193WP39542 402 aa0.92□□□□□ -2.26
VAM6YDL077C ACA1P39970 489 aa0.92□□□□□ -2.26
VAM6YDL077C YNL194CP40169 301 aa0.92□□□□□ -2.26
VAM6YDL077C CCS1P40202 249 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C YCH1P42937 148 aa0.92□□□□□ -2.26
VAM6YDL077C GON7P46984 123 aa0.92□□□□□ -2.26
VAM6YDL077C MMS2P53152 137 aa0.92□□□□□ -2.26
VAM6YDL077C SDS23P53172 527 aa0.92□□□□□ -2.26
VAM6YDL077C ALG13P53178 202 aa0.92□□□□□ -2.26
VAM6YDL077C BUD25P85052 153 aa0.92□□□□□ -2.26
VAM6YDL077C YLR012CQ07927 99 aa0.92□□□□□ -2.26
VAM6YDL077C YOR376WQ08900 122 aa0.92□□□□□ -2.26
VAM6YDL077C FIT3Q08907 204 aa0.92□□□□□ -2.26
VAM6YDL077C YOR015WQ12169 119 aa0.92□□□□□ -2.26
VAM6YDL077C YCR024C-BQ3E7Z8 88 aa0.92□□□□□ -2.26
VAM6YDL077C SCS22Q6Q595 175 aa0.92□□□□□ -2.26
VAM6YDL077C VPS63O13549 108 aa0.91□□□□□ -2.26
VAM6YDL077C YMR31P19955 123 aa0.91□□□□□ -2.26
VAM6YDL077C ERV1P27882 189 aa0.91□□□□□ -2.26
VAM6YDL077C DSS4P32601 143 aa0.91□□□□□ -2.26
VAM6YDL077C TIR2P33890 251 aa0.91□□□□□ -2.26
VAM6YDL077C SMP1P38128 452 aa0.91□□□□□ -2.26
VAM6YDL077C VID24P38263 362 aa0.91□□□□□ -2.26
VAM6YDL077C YBR184WP38299 523 aa0.91□□□□□ -2.26
VAM6YDL077C ECM34P38728 170 aa0.91□□□□□ -2.26
VAM6YDL077C CTR2P38865 189 aa0.91□□□□□ -2.26
VAM6YDL077C YER181CP40097 107 aa0.91□□□□□ -2.26
VAM6YDL077C YIL059CP40520 121 aa0.91□□□□□ -2.26
VAM6YDL077C YJL028WP47062 111 aa0.91□□□□□ -2.26
VAM6YDL077C TDA4P47153 279 aa0.91□□□□□ -2.26
VAM6YDL077C CPD1P53314 239 aa0.91□□□□□ -2.26
VAM6YDL077C SLG1P54867 378 aa0.91□□□□□ -2.26
VAM6YDL077C DAD3P69850 94 aa0.91□□□□□ -2.26
VAM6YDL077C COF1Q03048 143 aaKnown RBP0.91□□□□□ -2.26
VAM6YDL077C ROT1Q03691 256 aa0.91□□□□□ -2.26
VAM6YDL077C MIX14Q04341 121 aa0.91□□□□□ -2.26
VAM6YDL077C YMR320WQ04897 101 aa0.91□□□□□ -2.26
VAM6YDL077C STP3Q05937 343 aa0.91□□□□□ -2.26
VAM6YDL077C DIC1Q06143 298 aa0.91□□□□□ -2.26
VAM6YDL077C YDL242WQ07746 117 aa0.91□□□□□ -2.26
VAM6YDL077C GEP3Q08622 556 aa0.91□□□□□ -2.26
VAM6YDL077C HNT3Q08702 217 aa0.91□□□□□ -2.26
VAM6YDL077C SMT3Q12306 101 aaKnown RBP0.91□□□□□ -2.26
VAM6YDL077C YDR119W-AQ2V2P9 66 aa0.91□□□□□ -2.26
VAM6YDL077C YAL063C-AQ3E791 96 aa0.91□□□□□ -2.26
VAM6YDL077C YBR126W-AQ8TGU7 68 aa0.91□□□□□ -2.26
VAM6YDL077C BET2P20133 325 aa0.91□□□□□ -2.26
VAM6YDL077C MRS4P23500 304 aa0.91□□□□□ -2.26
VAM6YDL077C PCL2P25693 308 aa0.91□□□□□ -2.26
VAM6YDL077C SFT2P38166 215 aa0.91□□□□□ -2.26
VAM6YDL077C YGP1P38616 354 aaKnown RBP0.91□□□□□ -2.26
VAM6YDL077C LYS1P38998 373 aaRIP-Chip data0.91□□□□□ -2.26 RIP-Chip
VAM6YDL077C PAU7P39545 55 aa0.91□□□□□ -2.26
VAM6YDL077C PEX17P40155 199 aa0.91□□□□□ -2.26
VAM6YDL077C YIA6P40556 373 aa0.91□□□□□ -2.26
VAM6YDL077C SGN1P40561 250 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
VAM6YDL077C RPS10BP46784 105 aaKnown RBP0.91□□□□□ -2.26
VAM6YDL077C CTK2P46962 323 aa0.91□□□□□ -2.26
VAM6YDL077C YJL118WP47022 219 aa0.91□□□□□ -2.26
VAM6YDL077C SPG1P50088 95 aa0.91□□□□□ -2.26
VAM6YDL077C YHM2Q04013 314 aa0.91□□□□□ -2.26
VAM6YDL077C GPI19Q04082 140 aa0.91□□□□□ -2.26
VAM6YDL077C RRG8Q06109 277 aa0.91□□□□□ -2.26
VAM6YDL077C RAF1Q06891 181 aa0.91□□□□□ -2.26
VAM6YDL077C LDS2Q08218 356 aa0.91□□□□□ -2.26
VAM6YDL077C RDL2Q08742 149 aaKnown RBP0.91□□□□□ -2.26
VAM6YDL077C YOR292CQ08743 309 aa0.91□□□□□ -2.26
VAM6YDL077C RPS10AQ08745 105 aaPredicted RBP0.91□□□□□ -2.26
VAM6YDL077C GRE1Q08969 168 aa0.91□□□□□ -2.26
VAM6YDL077C YDL009CQ12210 107 aa0.91□□□□□ -2.26
VAM6YDL077C SUT2Q12286 268 aa0.91□□□□□ -2.26
VAM6YDL077C CSR2Q12734 1121 aa0.91□□□□□ -2.26
VAM6YDL077C YLR302CO13544 120 aa0.9□□□□□ -2.26
VAM6YDL077C UBC4P15731 148 aa0.9□□□□□ -2.26
VAM6YDL077C YCR006CP25350 157 aa0.9□□□□□ -2.26
VAM6YDL077C MIG1P27705 504 aa0.9□□□□□ -2.26
VAM6YDL077C SPC29P33419 253 aa0.9□□□□□ -2.26
VAM6YDL077C YBR144CP34215 104 aa0.9□□□□□ -2.26
VAM6YDL077C YBL059WP34224 193 aa0.9□□□□□ -2.26
VAM6YDL077C APS1P35181 156 aa0.9□□□□□ -2.26
VAM6YDL077C ADH5P38113 351 aaKnown RBP0.9□□□□□ -2.26
VAM6YDL077C YHL005CP38752 130 aa0.9□□□□□ -2.26
VAM6YDL077C YHR173CP38864 112 aa0.9□□□□□ -2.26
VAM6YDL077C YER134CP40081 178 aa0.9□□□□□ -2.26
VAM6YDL077C SPI1P40092 148 aa0.9□□□□□ -2.26
VAM6YDL077C YNL195CP40168 261 aa0.9□□□□□ -2.26
VAM6YDL077C BUD8P41698 603 aa0.9□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms