RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 MCM22P47167 239 aa-4.16□□□□□ -3.08
snR40snR40 GRX5Q02784 150 aa-4.16□□□□□ -3.08
snR40snR40 BCP1Q06338 283 aa-4.16□□□□□ -3.08
snR40snR40 SNU23Q12368 194 aaPredicted RBP-4.16□□□□□ -3.08
snR40snR40 SEC14P24280 304 aaKnown RBP-4.17□□□□□ -3.08
snR40snR40 NAS2P40555 220 aa-4.17□□□□□ -3.08
snR40snR40 RPC17P47076 161 aa-4.17□□□□□ -3.08
snR40snR40 VPS9P54787 451 aa-4.17□□□□□ -3.08
snR40snR40 YML079WQ03629 201 aa-4.17□□□□□ -3.08
snR40snR40 YLR297WQ05899 129 aa-4.17□□□□□ -3.08
snR40snR40 RRG8Q06109 277 aa-4.17□□□□□ -3.08
snR40snR40 ATP20Q12233 115 aa-4.17□□□□□ -3.08
snR40snR40 PRP18P33411 251 aaPredicted RBP-4.18□□□□□ -3.08
snR40snR40 GDI1P39958 451 aaKnown RBP-4.18□□□□□ -3.08
snR40snR40 MRX5P47007 382 aa-4.19□□□□□ -3.08
snR40snR40 GCN3P14741 305 aa-4.2□□□□□ -3.08
snR40snR40 LST8P41318 303 aa-4.2□□□□□ -3.08
snR40snR40 ERG10P41338 398 aaKnown RBP-4.2□□□□□ -3.08
snR40snR40 FAR7P43592 221 aa-4.2□□□□□ -3.08
snR40snR40 COF1Q03048 143 aaKnown RBP-4.2□□□□□ -3.08
snR40snR40 RPL25P04456 142 aaKnown RBP-4.21□□□□□ -3.08
snR40snR40 SPS2P08459 502 aa-4.21□□□□□ -3.08
snR40snR40 SYM1Q06563 197 aa-4.21□□□□□ -3.08
snR40snR40 AIM4P38305 123 aaPredicted RBP-4.22□□□□□ -3.08
snR40snR40 PAC10P48363 199 aa-4.22□□□□□ -3.08
snR40snR40 COG5P53951 403 aa-4.22□□□□□ -3.08
snR40snR40 YHR214C-EQ8TGK0 99 aa-4.22□□□□□ -3.08
snR40snR40 MAG1P22134 296 aaKnown RBP-4.23□□□□□ -3.09
snR40snR40 SEC28P40509 296 aaKnown RBP-4.23□□□□□ -3.09
snR40snR40 FMP33P46998 180 aa-4.23□□□□□ -3.09
snR40snR40 YDR209CQ03480 137 aa-4.23□□□□□ -3.09
snR40snR40 MHF1Q3E835 90 aa-4.23□□□□□ -3.09
snR40snR40 TRM5P38793 499 aa-4.24□□□□□ -3.09
snR40snR40 NSA2P40078 261 aaKnown RBP-4.24□□□□□ -3.09
snR40snR40 PHS1P40857 217 aa-4.24□□□□□ -3.09
snR40snR40 MIC26P50087 233 aa-4.24□□□□□ -3.09
snR40snR40 PNC1P53184 216 aaKnown RBP-4.24□□□□□ -3.09
snR40snR40 RPO21P04050 1733 aaKnown RBP-4.24□□□□□ -3.09
snR40snR40 SEC4P07560 215 aaKnown RBP-4.25□□□□□ -3.09
snR40snR40 YSF3P0C074 85 aaPredicted RBP-4.25□□□□□ -3.09
snR40snR40 SSO2P39926 295 aa-4.25□□□□□ -3.09
snR40snR40 SKI6P46948 246 aaPredicted RBP-4.25□□□□□ -3.09
snR40snR40 MRS1P07266 363 aa-4.26□□□□□ -3.09
snR40snR40 YCR087C-AP37263 153 aa-4.26□□□□□ -3.09
snR40snR40 OSW5P40219 148 aa-4.26□□□□□ -3.09
snR40snR40 YGL101WP53144 215 aa-4.26□□□□□ -3.09
snR40snR40 FUS2Q05670 677 aa-4.26□□□□□ -3.09
snR40snR40 YDL241WQ07738 123 aa-4.26□□□□□ -3.09
snR40snR40 YML100W-AQ8TGT0 57 aa-4.26□□□□□ -3.09
snR40snR40 CDC28P00546 298 aaKnown RBP-4.27□□□□□ -3.09
snR40snR40 SRB7P47822 140 aa-4.27□□□□□ -3.09
snR40snR40 TRM9P49957 279 aa-4.27□□□□□ -3.09
snR40snR40 YFL019CP43576 117 aa-4.28□□□□□ -3.09
snR40snR40 GPI11Q06636 219 aa-4.28□□□□□ -3.09
snR40snR40 CSM4Q08955 156 aa-4.28□□□□□ -3.09
snR40snR40 RUD3Q12234 484 aaKnown RBP-4.28□□□□□ -3.09
snR40snR40 YDR381C-AQ3E6R5 114 aa-4.28□□□□□ -3.09
snR40snR40 INO4P13902 151 aa-4.29□□□□□ -3.1
snR40snR40 SRP21P32342 167 aa-4.29□□□□□ -3.1
snR40snR40 SBH1P52870 82 aa-4.29□□□□□ -3.1
snR40snR40 THI74Q04083 370 aa-4.29□□□□□ -3.1
snR40snR40 MED11Q99278 115 aa-4.29□□□□□ -3.1
snR40snR40 HYM1P32464 399 aa-4.3□□□□□ -3.1
snR40snR40 BCY1P07278 416 aaKnown RBP-4.31□□□□□ -3.1
snR40snR40 CSH1P38287 376 aa-4.31□□□□□ -3.1
snR40snR40 YNL019CP53975 284 aa-4.31□□□□□ -3.1
snR40snR40 AIM34Q03673 198 aa-4.31□□□□□ -3.1
snR40snR40 TY1B-DR5P0C2I2 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-DR6P0C2I3 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-LR2P0C2I5 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-PR1P0C2I9 1755 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 TY1B-PR2P0C2J0 1756 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-JR1P47098 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-JR2P47100 1755 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 TY1B-ML2Q03434 1755 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 TY1B-ER1Q03612 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-DR1Q03855 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-MR2Q04670 1755 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 TY1B-ML1Q04711 1755 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 TY1B-GR1Q12141 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-GR2Q12269 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-OLQ12273 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-PLQ12414 1755 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 TY1B-ORQ92393 1755 aa-4.32□□□□□ -3.1
snR40snR40 TY1B-DR3Q99231 1755 aa-4.32□□□□□ -3.1
snR40snR40 THP2O13539 261 aaKnown RBP-4.32□□□□□ -3.1
snR40snR40 INH1P01097 85 aa-4.32□□□□□ -3.1
snR40snR40 SPT3P06844 337 aa-4.32□□□□□ -3.1
snR40snR40 NMT1P14743 455 aa-4.32□□□□□ -3.1
snR40snR40 URA6P15700 204 aa-4.32□□□□□ -3.1
snR40snR40 HSP30P25619 332 aa-4.32□□□□□ -3.1
snR40snR40 LOC1P43586 204 aaPredicted RBP-4.32□□□□□ -3.1
snR40snR40 ATG10Q07879 167 aa-4.32□□□□□ -3.1
snR40snR40 PAM18Q07914 168 aa-4.32□□□□□ -3.1
snR40snR40 RPS24AP0CX31 135 aaKnown RBP-4.33□□□□□ -3.1
snR40snR40 RPS24BP0CX32 135 aaKnown RBP-4.33□□□□□ -3.1
snR40snR40 MRP1P10662 321 aaKnown RBP-4.33□□□□□ -3.1
snR40snR40 TAF14P35189 244 aa-4.33□□□□□ -3.1
snR40snR40 HMF1P40037 129 aaKnown RBP-4.33□□□□□ -3.1
snR40snR40 SPO19Q03029 223 aa-4.33□□□□□ -3.1
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms